mRNA_E-siliculosus-1a_F_contig1334.2017.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 4.920e-166 Identity = 229/324 (70.68%), Postives = 266/324 (82.10%), Query Frame = 1
Query: 16 QVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
QV+G+GNCFDD+ QLS MS+ MA TFHKFC+HFA E+F+EHIYLPTG+Y DEVM ++H+LG TGA GSTDVTHIGW MCPFTLGRS+TGKEGFPTIAY VTVDH GR +A+T+GFTGATNDKTIIRYD+GV+ I+T +QYTER YKLR+A+GT R R+GC+LIVDNGYHEWVTLIAPSKYP EDTAFSR LESVRKDV CF RILKLR+ YH +E +DNIF TCCILHNMLHTFDG+DVFEE+ DW GSAG HD W+HDPLTD+TS+GS G L EK E GE ++HP H ELK+QLIESF++RK+
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKK 357
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 1.680e-137 Identity = 200/319 (62.70%), Postives = 235/319 (73.67%), Query Frame = 1
Query: 13 LQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETIDQHPGHRELKKQLIESF 954
L V+G+GNCFDD+ QLS MS MA ATFHKFC+HFA E+F+EHI+ PT +Y DE M ++H+LG TGA STDVTHI MCPFTLGRS+TGKEGFPTIAY+VTVDHA RA+A+T+GFTGA NDKT+I YD+GV+ I+T++QYTER YKLR+A+GT R R+GC+ IVDNGYHE DVECFFGILKGRFRILKLR+ YH +E IDNIF TCCI HNMLHTFDG+D+FEE+ DW GSAG HD W+ DPL D+TS+GS G L EKEE GE + H ELKKQLIESF
Sbjct: 102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 5.040e-137 Identity = 189/322 (58.70%), Postives = 239/322 (74.22%), Query Frame = 1
Query: 1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
VL LQ++ RGNCF DI +S +S AAATFH+F ++FA E++ EHI+LPTG YQ +VM+ Y +LG +GA GSTDVTHI WGMCP+ RSYTGKEG+PT+AYQVTVDH R +A+T GFTG+TNDK+IIRYD V I+ D Y+E+ + + ADGT + KGCYL+VDNGYH+WVTLI PSKYP + D AFS+ LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+F TCCILHNMLH++D EE+ +W G+AGLH+ W+H+P D +S+G+ G S+E ++ G +KQLI SF YRK
Sbjct: 159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKG-------SSASTEDVEVESGFNTRRKQLIASFVYRK 473
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 409 bits (1052), Expect = 2.540e-136 Identity = 216/379 (56.99%), Postives = 255/379 (67.28%), Query Frame = 1
Query: 97 HKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNG----------YHE---------------WVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHT---------------------------------------------------------FDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
HKFC+HFA E+F+EHIYL TG+Y DEVM ++H+LG TGA GST+VTHIGW MCPFTLGRS+TGKEGFPTIA +VTVDHAGRA+A+T+GFTGATNDKTIIRYD+GV+ I+T++QYTER YKLR+A+GT R R+GC+LIVDNG +H+ WVTLIAPSKYP + EDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHT FDG+DVFEE+ DW GSAG HD W+HDPLTD+TS+GS G L E+EE GE ++HP H E K+ LIESF++RK+
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKK 624
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 375 bits (963), Expect = 3.330e-128 Identity = 179/246 (72.76%), Postives = 211/246 (85.77%), Query Frame = 1
Query: 250 MCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
MCPFTLGRS+TGKEGFPTIAY+VTVDH GRA+A+T+GFTGATNDKTIIRYD+GV+ I+T++QYTER YKLR+ +GT R R+GC+LI+DN YHEWVTLIAPSKYP + +DTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHTFDG+DVF+E+ DW GSAG HD W+HDPLTD+TS+GS G L E+EE GE ++HP H ELK+QLIESF++RK+
Sbjct: 1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKK 246
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 375 bits (964), Expect = 3.880e-126 Identity = 182/322 (56.52%), Postives = 229/322 (71.12%), Query Frame = 1
Query: 1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
VL LQ++ RGN F DI +S +S A+TFH+FCK+FA EL++E++YLPTG +VM Y ++G GA+GSTDVTHI WGMCP+ R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTIIRYD V I+TD YTE+ YKL DG E KGCYL+VDNGYH+W TLI PSK P + D FS+ LES RKDVEC+FGILKGRFRI KL +G+H +E IDN+F TCCILHNMLH+FD E+ +W GSAGLH+ D DP TD++S+GS +G E ++ G L+ +L+ +F YR+
Sbjct: 84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-------DG--QHEAVEVETGFGALRSKLVTNFVYRR 396
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 375 bits (964), Expect = 7.260e-125 Identity = 182/322 (56.52%), Postives = 229/322 (71.12%), Query Frame = 1
Query: 1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
VL LQ++ RGN F DI +S +S A+TFH+FCK+FA EL++E++YLPTG +VM Y ++G GA+GSTDVTHI WGMCP+ R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTIIRYD V I+TD YTE+ YKL DG E KGCYL+VDNGYH+W TLI PSK P + D FS+ LES RKDVEC+FGILKGRFRI KL +G+H +E IDN+F TCCILHNMLH+FD E+ +W GSAGLH+ D DP TD++S+GS +G E ++ G L+ +L+ +F YR+
Sbjct: 175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-------DG--QHEAVEVETGFGALRSKLVTNFVYRR 487
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 368 bits (944), Expect = 1.220e-123 Identity = 174/244 (71.31%), Postives = 204/244 (83.61%), Query Frame = 1
Query: 13 LQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHT 744
L+V+G+GNCFDD+ QLS MS +A A FHKFC+H A E+F+EHIYLPTG+Y DEVM ++H+LG TGA GSTDVTHIG MCPFTLGRS+TGKEGFPTIAY+VTVDHAGRA+A+T+GF G TNDKT IRYD+GV+ I+T++QYTER YKLR+ +GT R R+GC+LIVDNGY+E + EDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHT
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 356 bits (913), Expect = 9.900e-118 Identity = 182/326 (55.83%), Postives = 223/326 (68.40%), Query Frame = 1
Query: 1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPT--GSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRKRN 972
VL L ++GRGN F I LS MS P FH+FC+HFA E+++EHI+LP+ D VM Y KLG GA+GSTDVTHIGW CP+ GRSYTGKEG PT+ YQVTV+HAGR +A+T GFTG+TNDKTII D V I+TD QY E+ + + + DGT KGCYLIVDNGYH+W LI PSKYP + D FS+ LESVRKDVECFFGILK RFRILKL + Y +E +D +F TCCILHNMLHT DGM EEDV+WVGSA L + H+ D +S+G T +L +K + H ELK++L +F YRK++
Sbjct: 128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVG-TKDLNDKPQV---------EAAHAELKRKLTTNFLYRKKH 441
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 350 bits (899), Expect = 1.610e-116 Identity = 165/268 (61.57%), Postives = 197/268 (73.51%), Query Frame = 1
Query: 1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPT--GSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAG 798
VL L ++GRGNCF I Q+S MS FHKFCKHFA E+++EHIYLP+ D VM Y +LG +GA+GS DVTHIGW CP+ L RSYTGKEG PT+ YQVTV+HAGRAIA+T GFT +TNDKT + +DA V I+TD QYTE+T+ + DGT KGCYL+VDNGYH+W L+ P+KYP + D FS+ LESVRKDVECFFGILKG FRI K+ + YH +E IDN+F TCCILHNMLHTFDGMD E+ WV SAG
Sbjct: 99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1334.2017.1 >prot_E-siliculosus-1a_F_contig1334.2017.1 ID=prot_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=317bp MGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDback to top mRNA from alignment at E-siliculosus-1a_F_contig1334:530..2071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1334.2017.1 ID=mRNA_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1542bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1334:530..2071- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1334:530..2071- >mRNA_E-siliculosus-1a_F_contig1334.2017.1 ID=mRNA_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1334:530..2071- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |