mRNA_E-siliculosus-1a_F_contig1334.2017.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1334.2017.1
Unique NamemRNA_E-siliculosus-1a_F_contig1334.2017.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 4.920e-166
Identity = 229/324 (70.68%), Postives = 266/324 (82.10%), Query Frame = 1
Query:   16 QVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
            QV+G+GNCFDD+ QLS MS+ MA  TFHKFC+HFA E+F+EHIYLPTG+Y DEVM ++H+LG TGA GSTDVTHIGW MCPFTLGRS+TGKEGFPTIAY VTVDH GR +A+T+GFTGATNDKTIIRYD+GV+ I+T +QYTER YKLR+A+GT R R+GC+LIVDNGYHEWVTLIAPSKYP   EDTAFSR LESVRKDV CF        RILKLR+ YH +E +DNIF TCCILHNMLHTFDG+DVFEE+ DW GSAG HD W+HDPLTD+TS+GS G L      EK E GE      ++HP H ELK+QLIESF++RK+
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKK 357          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 1.680e-137
Identity = 200/319 (62.70%), Postives = 235/319 (73.67%), Query Frame = 1
Query:   13 LQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETIDQHPGHRELKKQLIESF 954
            L V+G+GNCFDD+ QLS MS  MA ATFHKFC+HFA E+F+EHI+ PT +Y DE M ++H+LG TGA  STDVTHI   MCPFTLGRS+TGKEGFPTIAY+VTVDHA RA+A+T+GFTGA NDKT+I YD+GV+ I+T++QYTER YKLR+A+GT R R+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH +E IDNIF TCCI HNMLHTFDG+D+FEE+ DW GSAG HD W+ DPL D+TS+GS G L      EKEE GE      +   H ELKKQLIESF
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 5.040e-137
Identity = 189/322 (58.70%), Postives = 239/322 (74.22%), Query Frame = 1
Query:    1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
            VL  LQ++ RGNCF DI  +S +S   AAATFH+F ++FA E++ EHI+LPTG YQ +VM+ Y +LG +GA GSTDVTHI WGMCP+   RSYTGKEG+PT+AYQVTVDH  R +A+T GFTG+TNDK+IIRYD  V  I+ D  Y+E+ + +  ADGT  + KGCYL+VDNGYH+WVTLI PSKYP +  D AFS+ LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+F TCCILHNMLH++D     EE+ +W G+AGLH+ W+H+P  D +S+G+ G          S+E ++   G    +KQLI SF YRK
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKG-------SSASTEDVEVESGFNTRRKQLIASFVYRK 473          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 2.540e-136
Identity = 216/379 (56.99%), Postives = 255/379 (67.28%), Query Frame = 1
Query:   97 HKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNG----------YHE---------------WVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHT---------------------------------------------------------FDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
            HKFC+HFA E+F+EHIYL TG+Y DEVM ++H+LG TGA GST+VTHIGW MCPFTLGRS+TGKEGFPTIA +VTVDHAGRA+A+T+GFTGATNDKTIIRYD+GV+ I+T++QYTER YKLR+A+GT R R+GC+LIVDNG          +H+               WVTLIAPSKYP + EDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHT                                                         FDG+DVFEE+ DW GSAG HD W+HDPLTD+TS+GS G L      E+EE GE      ++HP H E K+ LIESF++RK+
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKK 624          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 3.330e-128
Identity = 179/246 (72.76%), Postives = 211/246 (85.77%), Query Frame = 1
Query:  250 MCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGEL-----PEKEEGGESSETI-DQHPGHRELKKQLIESFSYRKR 969
            MCPFTLGRS+TGKEGFPTIAY+VTVDH GRA+A+T+GFTGATNDKTIIRYD+GV+ I+T++QYTER YKLR+ +GT R R+GC+LI+DN YHEWVTLIAPSKYP + +DTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHTFDG+DVF+E+ DW GSAG HD W+HDPLTD+TS+GS G L      E+EE GE      ++HP H ELK+QLIESF++RK+
Sbjct:    1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKK 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 3.880e-126
Identity = 182/322 (56.52%), Postives = 229/322 (71.12%), Query Frame = 1
Query:    1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
            VL  LQ++ RGN F DI  +S +S    A+TFH+FCK+FA EL++E++YLPTG    +VM  Y ++G  GA+GSTDVTHI WGMCP+   R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTIIRYD  V  I+TD  YTE+ YKL   DG   E KGCYL+VDNGYH+W TLI PSK P +  D  FS+ LES RKDVEC+FGILKGRFRI KL +G+H +E IDN+F TCCILHNMLH+FD      E+ +W GSAGLH+  D DP TD++S+GS        +G    E ++   G   L+ +L+ +F YR+
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-------DG--QHEAVEVETGFGALRSKLVTNFVYRR 396          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 7.260e-125
Identity = 182/322 (56.52%), Postives = 229/322 (71.12%), Query Frame = 1
Query:    1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRK 966
            VL  LQ++ RGN F DI  +S +S    A+TFH+FCK+FA EL++E++YLPTG    +VM  Y ++G  GA+GSTDVTHI WGMCP+   R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTIIRYD  V  I+TD  YTE+ YKL   DG   E KGCYL+VDNGYH+W TLI PSK P +  D  FS+ LES RKDVEC+FGILKGRFRI KL +G+H +E IDN+F TCCILHNMLH+FD      E+ +W GSAGLH+  D DP TD++S+GS        +G    E ++   G   L+ +L+ +F YR+
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-------DG--QHEAVEVETGFGALRSKLVTNFVYRR 487          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 1.220e-123
Identity = 174/244 (71.31%), Postives = 204/244 (83.61%), Query Frame = 1
Query:   13 LQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHT 744
            L+V+G+GNCFDD+ QLS MS  +A A FHKFC+H A E+F+EHIYLPTG+Y DEVM ++H+LG TGA GSTDVTHIG  MCPFTLGRS+TGKEGFPTIAY+VTVDHAGRA+A+T+GF G TNDKT IRYD+GV+ I+T++QYTER YKLR+ +GT R R+GC+LIVDNGY+E            + EDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +E IDNIF TCCILHNMLHT
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 9.900e-118
Identity = 182/326 (55.83%), Postives = 223/326 (68.40%), Query Frame = 1
Query:    1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPT--GSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGHRELKKQLIESFSYRKRN 972
            VL  L ++GRGN F  I  LS MS P     FH+FC+HFA E+++EHI+LP+      D VM  Y KLG  GA+GSTDVTHIGW  CP+  GRSYTGKEG PT+ YQVTV+HAGR +A+T GFTG+TNDKTII  D  V  I+TD QY E+ + + + DGT    KGCYLIVDNGYH+W  LI PSKYP +  D  FS+ LESVRKDVECFFGILK RFRILKL + Y  +E +D +F TCCILHNMLHT DGM   EEDV+WVGSA L +   H+   D +S+G T +L +K +             H ELK++L  +F YRK++
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVG-TKDLNDKPQV---------EAAHAELKRKLTTNFLYRKKH 441          
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 1.610e-116
Identity = 165/268 (61.57%), Postives = 197/268 (73.51%), Query Frame = 1
Query:    1 VLTALQVMGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPT--GSYQDEVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAG 798
            VL  L ++GRGNCF  I Q+S MS       FHKFCKHFA E+++EHIYLP+      D VM  Y +LG +GA+GS DVTHIGW  CP+ L RSYTGKEG PT+ YQVTV+HAGRAIA+T GFT +TNDKT + +DA V  I+TD QYTE+T+ +   DGT    KGCYL+VDNGYH+W  L+ P+KYP +  D  FS+ LESVRKDVECFFGILKG FRI K+ + YH +E IDN+F TCCILHNMLHTFDGMD   E+  WV SAG
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1334.2017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE4.920e-16670.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE1.680e-13762.70DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE5.040e-13758.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE2.540e-13656.99DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JQM6_9PHAE3.330e-12872.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE3.880e-12656.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE7.260e-12556.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE1.220e-12371.31DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JBE2_9PHAE9.900e-11855.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE1.610e-11661.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1334contigE-siliculosus-1a_F_contig1334:530..2071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size951
Model size972
Exons2
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2E2RF@1,2S9YA@2759
EggNOG free text desc.Plant transposon protein
Seed eggNOG ortholog2880.D7FSK2
Seed ortholog evalue2e-84
Seed ortholog score319.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1334.2017.1prot_E-siliculosus-1a_F_contig1334.2017.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1334 530..2050 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.599839-CDS-E-siliculosus-1a_F_contig1334:529..9731622927853.599839-CDS-E-siliculosus-1a_F_contig1334:529..973Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1334 530..973 -
1696318709.0300908-CDS-E-siliculosus-1a_F_contig1334:529..9731696318709.0300908-CDS-E-siliculosus-1a_F_contig1334:529..973Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1334 530..973 -
1622927853.6148763-CDS-E-siliculosus-1a_F_contig1334:1543..20501622927853.6148763-CDS-E-siliculosus-1a_F_contig1334:1543..2050Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1334 1544..2050 -
1696318709.0412133-CDS-E-siliculosus-1a_F_contig1334:1543..20501696318709.0412133-CDS-E-siliculosus-1a_F_contig1334:1543..2050Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1334 1544..2050 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927853.6271555-UTR-E-siliculosus-1a_F_contig1334:2050..20711622927853.6271555-UTR-E-siliculosus-1a_F_contig1334:2050..2071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1334 2051..2071 -
1696318709.0537672-UTR-E-siliculosus-1a_F_contig1334:2050..20711696318709.0537672-UTR-E-siliculosus-1a_F_contig1334:2050..2071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1334 2051..2071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1334.2017.1

>prot_E-siliculosus-1a_F_contig1334.2017.1 ID=prot_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=317bp
MGRGNCFDDISQLSLMSRPMAAATFHKFCKHFAEELFEEHIYLPTGSYQD
EVMSMYHKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVT
VDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTERTYKLRRAD
GTFRERKGCYLIVDNGYHEWVTLIAPSKYPANMEDTAFSRTLESVRKDVE
CFFGILKGRFRILKLRLGYHSKEDIDNIFSTCCILHNMLHTFDGMDVFEE
DVDWVGSAGLHDPWDHDPLTDFTSLGSTGELPEKEEGGESSETIDQHPGH
RELKKQLIESFSYRKRN
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mRNA from alignment at E-siliculosus-1a_F_contig1334:530..2071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1334.2017.1 ID=mRNA_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1542bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1334:530..2071- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTATTGACGGCCCTCCAGGTAATGGGCAGGGGCAACTGCTTCGACGACAT TAGTCAGCTGTCTTTGATGAGCAGGCCGATGGCGGCGGCCACGTTCCACA AGTTCTGCAAGCACTTCGCGGAGGAACTGTTCGAGGAGCACATCTACCTT CCTACCGGATCGTACCAGGATGAAGTAATGAGCATGTACCACAAGCTGGG GATGACGGGGGCCATCGGATCTACCGACGTGACCCACATCGGGTGGGGCA TGTGTCCGTTCACGCTGGGCCGTTCTTATACGGGCAAGGAGGGGTTCCCG ACCATCGCCTACCAAGTGACAGTCGACCACGCCGGCCGAGCCATCGCGAT CACCAGCGGATTCACCGGGGCAACCAACGACAAGACCATCATCCGCTACG ACGCAGGTGTCCACACCATCAAGACGGATGCCCAGTACACCGAGCGCACG TACAAGCTCCGGAGGGCGGATGGAACATTCCGGGAGCGCAAGGGGTGCTA CTTGATCGTTGACAACGGGTACCACGAGGTAAATGCATTTGGCCTTCCTA AGATAATAAGAGATACTCCCGGCGGGAAGCACTTGCGCAGGGCTAGGTCA ATCGTACTTGTAGGCACATCCACGAAGAGCGTTGTCCCAGGGTACAACCC GGATGTTCCCGGTGCCAACCCAAAACGTAATTCTCGTTCCGCCTACGCGT ACTTGGTGCCAGGAAATGTGGGCAACGTGGATGGAAAACCGCATGTCAAT GGTGGTTGTAGACGTTGGGGAAAGTGTTTTGGTCGCGCTGTAGATTTATC GTCGACGTACGCTCAATAATTTAACGCACGCCCGTGCCGGATTGGGCACG TTTGTTCGTTTGGGTGCGTAGATAGCTACAAGAGTTTCAGAGAAACCTCA CTCGACCCGCGCCAGGCAGGCGGTTCTCGTAGCCAATAATGACCTCGCCG GCGGTGCCGAGTTATGGTTTGAATCATGCGGTGCCCACATGTTTGATTGT TTGGCTATCAGAGCGCGGATAACCCACTCGTCTAAGCCCCTGAAGTACCC GCCGGCAATTTCGTTACAAATTCTGCTTCCATCTGTCCTGCCAAACAGTG GGTGACCCTCATCGCTCCGTCCAAGTATCCGGCGAACATGGAGGACACCG CCTTCTCGAGGACGCTTGAGAGCGTGCGCAAGGATGTCGAGTGCTTCTTC GGTATCCTGAAGGGACGTTTCAGAATTCTCAAGCTCCGCCTCGGGTACCA CTCCAAGGAAGACATCGACAACATCTTCTCCACCTGCTGCATCTTGCACA ACATGCTTCACACCTTCGACGGCATGGACGTGTTCGAGGAAGATGTCGAC TGGGTAGGGAGCGCTGGCCTGCACGACCCGTGGGACCACGACCCACTGAC AGACTTCACGTCTTTGGGATCGACCGGGGAGCTTCCGGAGAAGGAGGAGG GGGGGGAGAGCAGCGAGACGATCGACCAGCACCCAGGGCACAGAGAGCTC AAGAAACAGCTAATCGAGAGCTTTTCTTACCGGAAGAGAAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1334:530..2071-

>mRNA_E-siliculosus-1a_F_contig1334.2017.1 ID=mRNA_E-siliculosus-1a_F_contig1334.2017.1|Name=mRNA_E-siliculosus-1a_F_contig1334.2017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1334:530..2071- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCAGGGGCAACTGCTTCGACGACATTAGTCAGCTGTCTTTGATGAG
CAGGCCGATGGCGGCGGCCACGTTCCACAAGTTCTGCAAGCACTTCGCGG
AGGAACTGTTCGAGGAGCACATCTACCTTCCTACCGGATCGTACCAGGAT
GAAGTAATGAGCATGTACCACAAGCTGGGGATGACGGGGGCCATCGGATC
TACCGACGTGACCCACATCGGGTGGGGCATGTGTCCGTTCACGCTGGGCC
GTTCTTATACGGGCAAGGAGGGGTTCCCGACCATCGCCTACCAAGTGACA
GTCGACCACGCCGGCCGAGCCATCGCGATCACCAGCGGATTCACCGGGGC
AACCAACGACAAGACCATCATCCGCTACGACGCAGGTGTCCACACCATCA
AGACGGATGCCCAGTACACCGAGCGCACGTACAAGCTCCGGAGGGCGGAT
GGAACATTCCGGGAGCGCAAGGGGTGCTACTTGATCGTTGACAACGGGTA
CCACGAGATGGGCAGGGGCAACTGCTTCGACGACATTAGTCAGCTGTCTT
TGATGAGCAGGCCGATGGCGGCGGCCACGTTCCACAAGTTCTGCAAGCAC
TTCGCGGAGGAACTGTTCGAGGAGCACATCTACCTTCCTACCGGATCGTA
CCAGGATGAAGTAATGAGCATGTACCACAAGCTGGGGATGACGGGGGCCA
TCGGATCTACCGACGTGACCCACATCGGGTGGGGCATGTGTCCGTTCACG
CTGGGCCGTTCTTATACGGGCAAGGAGGGGTTCCCGACCATCGCCTACCA
AGTGACAGTCGACCACGCCGGCCGAGCCATCGCGATCACCAGCGGATTCA
CCGGGGCAACCAACGACAAGACCATCATCCGCTACGACGCAGGTGTCCAC
ACCATCAAGACGGATGCCCAGTACACCGAGCGCACGTACAAGCTCCGGAG
GGCGGATGGAACATTCCGGGAGCGCAAGGGGTGCTACTTGATCGTTGACA
ACGGGTACCACGAGTGGGTGACCCTCATCGCTCCGTCCAAGTATCCGGCG
AACATGGAGGACACCGCCTTCTCGAGGACGCTTGAGAGCGTGCGCAAGGA
TGTCGAGTGCTTCTTCGGTATCCTGAAGGGACGTTTCAGAATTCTCAAGC
TCCGCCTCGGGTACCACTCCAAGGAAGACATCGACAACATCTTCTCCACC
TGCTGCATCTTGCACAACATGCTTCACACCTTCGACGGCATGGACGTGTT
CGAGGAAGATGTCGACTGGGTAGGGAGCGCTGGCCTGCACGACCCGTGGG
ACCACGACCCACTGACAGACTTCACGTCTTTGGGATCGACCGGGGAGCTT
CCGGAGAAGGAGGAGGGGGGGGAGAGCAGCGAGACGATCGACCAGCACCC
AGGGCACAGAGAGCTCAAGAAACAGCTAATCGAGAGCTTTTCTTACCGGA
AGAGAAACTGGGTGACCCTCATCGCTCCGTCCAAGTATCCGGCGAACATG
GAGGACACCGCCTTCTCGAGGACGCTTGAGAGCGTGCGCAAGGATGTCGA
GTGCTTCTTCGGTATCCTGAAGGGACGTTTCAGAATTCTCAAGCTCCGCC
TCGGGTACCACTCCAAGGAAGACATCGACAACATCTTCTCCACCTGCTGC
ATCTTGCACAACATGCTTCACACCTTCGACGGCATGGACGTGTTCGAGGA
AGATGTCGACTGGGTAGGGAGCGCTGGCCTGCACGACCCGTGGGACCACG
ACCCACTGACAGACTTCACGTCTTTGGGATCGACCGGGGAGCTTCCGGAG
AAGGAGGAGGGGGGGGAGAGCAGCGAGACGATCGACCAGCACCCAGGGCA
CAGAGAGCTCAAGAAACAGCTAATCGAGAGCTTTTCTTACCGGAAGAGAA
AC
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