mRNA_E-siliculosus-1a_F_contig1332.2009.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Match: D7FVQ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVQ1_ECTSI) HSP 1 Score: 1174 bits (3037), Expect = 0.000e+0 Identity = 679/763 (88.99%), Postives = 694/763 (90.96%), Query Frame = 1
Query: 1 MPVNATETRSGRGGGGLASKLFNKFDSDRKYDPFLDTDPVIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQEDRDIRNIRAGLALREDVVKDAEKKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVHRGAFQLTLEGTLYGMIKEGHVALKRAAVMAREVLDGMDAGPERFDGVDPEVVNGYSANESNGDGINPYPTQKGFGSAAGGSDLGLAARNQTEGRKRFEESKAGESGAEVDPEENGKQTWAAPRPQGGGSTRVDSKRTGGNDSRERGQTVLTEMKLEDDEEEGVSQTRTDKGATWGHGHDDGSGRRRNLLNVLGPSLGKTLETHRRACTRYSNQVVELEGQNAALTARAAEASKLAEEATTEAKLWEAKHCALERRLAEVEERSRQDLACAEERADKACLRTVKVVELQTEKLERATPTLLDMLTGFAPRETEELGAYLLHSLDIEPDLYAHIIATKRMFE----------ADMESRAFEILEAERNIALAEAEAAALEXXXXXXXXXXXXXXGERGRPKSXXXXXXXXXXXXXXXXXXXXXXXSPTGKGAKKXXXXXXXXSVGGGAGKDXXXXXXXXXXXDXXAGKENKTAAAASKPSSADKKRSSSPAKKGAAGKGNKKK 2259
MPVNATETR GRGGGGLASKLFNKFDSDRKYDPFLDTDPVIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQE+RDIRNIRAGLALREDVVKDAE KTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVHRGAFQLTLEGTLYGMIKEGHVALK AAVMAREVLDGMD GPERFDGVDPEVVNG SANESNGDG +P PTQ+GFGSAAGGSDLGLAA NQTEGRKR EESKAG SGAEVDPEENGKQTWAAPRPQGGGSTR+DS+RTGGN+S+ER QTVLTEMKL + EEEGVSQTRTDKGATWGHGHDDGSGRRRNLLNVLGP LGKTLETHRRACTRYSNQV +LEGQNAALTARAA A KLAEEATTEAKL EAKHCALE+RLAEVEERSRQDLACAEERADKACLRT++VVELQTEKLERATPTLLDMLT FAPRETEELGAYLLHSLDIEPDLYAHI+ATKRMFE ADMESRAFE+LEAER IALAE XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX PTGKGAKK +VGGGAGKD XXXX DXX T AASKPSSADKKRSSSPAKKGAAGKGNKKK
Sbjct: 1 MPVNATETRPGRGGGGLASKLFNKFDSDRKYDPFLDTDPVIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQEERDIRNIRAGLALREDVVKDAENKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVHRGAFQLTLEGTLYGMIKEGHVALKSAAVMAREVLDGMDTGPERFDGVDPEVVNGCSANESNGDGYSPCPTQRGFGSAAGGSDLGLAAANQTEGRKRLEESKAGASGAEVDPEENGKQTWAAPRPQGGGSTRIDSRRTGGNNSQERRQTVLTEMKLGEGEEEGVSQTRTDKGATWGHGHDDGSGRRRNLLNVLGPCLGKTLETHRRACTRYSNQVADLEGQNAALTARAAAACKLAEEATTEAKLLEAKHCALEQRLAEVEERSRQDLACAEERADKACLRTLEVVELQTEKLERATPTLLDMLTRFAPRETEELGAYLLHSLDIEPDLYAHIVATKRMFELQEVLAFTTKADMESRAFEMLEAERKIALAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGKGAKKGAEKGSSKAVGGGAGKDKKPAGKXXXXGDXXXXXXXXTXXAASKPSSADKKRSSSPAKKGAAGKGNKKK 763
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Match: A0A836CGG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG2_9STRA) HSP 1 Score: 176 bits (445), Expect = 7.300e-42 Identity = 96/213 (45.07%), Postives = 130/213 (61.03%), Query Frame = 1
Query: 4 PVNATETRSGRGGGGLASKLFNKFDSDRKYDPF-LDTDPVIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKR-NSLMQEDRDIRNIRAGLALREDVVKDAEKKTREQHDYRFVLQYFSASRDLHR 636
P++ G+ G A+ L ++K+DPF D V+ D K GME LL M + VE++SL GALG + P ++ +M+YIREG +RFA+VL+F WEGLLFEYLR+VGCP+ E DPR +V++YWRRS DP FVP+Y +R V R + +ED D+ +RA + E VK+AE R DYR +L YFSA+ DLHR
Sbjct: 7 PISGPAAAGGKPTRGAAALLQR---IEKKFDPFGKGADRVMLDMKAGMEMLLDMHSPVELSSLCGALGVLEPVTSPERKSAVMHYIREGRHQAEQRFAEVLRFVWEGLLFEYLRSVGCPVFTAERDPRIYVLKYWRRSTTDPRGAASFVPYYLERRVYARADGQPEEDPDVGEVRARIMGAEVAVKEAEALVRASRDYRHILTYFSATADLHR 216
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Match: A0A7S1XJ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ94_9STRA) HSP 1 Score: 142 bits (357), Expect = 9.390e-33 Identity = 84/229 (36.68%), Postives = 132/229 (57.64%), Query Frame = 1
Query: 94 DPFLDTDPVI-QDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYI-----REGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKK--RNSLMQEDRDIRNIRAGLALREDVVKDAEKKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETK 756
DPF + + ++ QD +G++ +L + N VE++SL G+LG + P + ++ Y+ +E G HV + + +VLK WEG+LFEYLR+VG PL DPR FV RYW++ DP R FVP+Y REV+ N ++D D+ + + +E VK E R++ DYR +L + +A ++L ++ +YL +VE+LR+ H S IME+Q ELE +
Sbjct: 38 DPFAEQNSLLRQDMAKGLDDILELHNPVEMSSLCGSLGIDIDLPIEEMKAEVRRYVQSHKAKENGTHVERNYHEVLKVVWEGVLFEYLRSVGQPLHSNHLDPRTFVARYWKKRATDPKNRL-FVPYYTGREVRNCHENGDYKDD-DLEMVLDDVETKEITVKKMETIMRKERDYRHILNFLNAVKELRDAEKSHRDYLILQVEKLRSVHGHWISSQKIMEEQTEELEQR 264
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Match: F0YAF5_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAF5_AURAN) HSP 1 Score: 132 bits (332), Expect = 7.790e-28 Identity = 86/256 (33.59%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 40 GGGLASKLFNKFDSDRKYDPFLDTDP-VIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCP---RNAKEQQIMNYIR-EGGRH--VGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWR-RSMLDPSVRPGFVPFYAKREVKKRNSLMQEDRDIRNIRAGLALREDVVKDAEKKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLV 783
G G NKF + DP ++ + + Q+ +EG+ LL M N E+ SL GALG V C K+ +M + EG RH K D L W+G+LFEYLR G PLR DPR F ++ WR R+ + F P Y R +++R D+ I G+ +E VK E K R++ DYR V+++ + + LH +YL +E+E R +DH + S+ + +Q ELE K+++ LV
Sbjct: 13 GMGFDLHKLNKFAKGQVLDPLVEEEKRLAQNLREGLSTLLDMHNPAELGSLCGALGLVEECEFGTHGEKKAGVMRRVALEGARHGSTEKAHMDCLAMMWDGILFEYLRAEGMPLRSARIDPRVFTLQLWRKRAAFNSGGNVVFRPHYVPRHIRRRGKGAPRAADLEGILRGVEAKELAVKHVENKIRKESDYRNVIRFLADTTSLHEFERDARDYLMHELEAARDRIDHYNMSLEMTAEQLGELELKHERCAEVLV 268
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Match: A0A8J2WS82_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS82_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.930e-23 Identity = 76/254 (29.92%), Postives = 121/254 (47.64%), Query Frame = 1
Query: 46 GLASKLFNKFDSDRKYDPFLDTDP-VIQDSKEGMEALLSMCNAVEINSLFGALGFVVPCPRNAKEQQIMNYIRE----GGRHVGKRFA--DVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPG-FVPFYAKREVKKRNSLMQEDRDIRNIRAGLALREDVVKDAEKKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLV 783
G + NKF DP + + + +EG+ LL M N E+ SL GA+G V C ++ +R+ G R+ A + L+ W+G+L+EYLR G PLR DPR F ++ WRR G F P Y R V+ R+ D+ + G+ +E +K E+K R++ DYR V+++ + + LH +YL +E+E R +DH S+ + +Q E E +++ LV
Sbjct: 96 GFDLQKLNKFSKSEILDPLVQEEKNLAAQLREGLSKLLDMHNPAELGSLCGAMGLVEECEFGTHAEKKAGVLRKVAQTGARYNSTERAHMECLETMWDGILYEYLRAEGQPLRSARVDPRVFTLQMWRRRAAFSQGGQGIFRPHYVPRMVRMRDQKPPRAADLEGLLRGVEAKELALKHIERKVRKESDYRNVIRFLADTTSLHEFERDARDYLMHELESCRDRIDHYQASLEMTGEQLGEAELVHERATTTLV 349 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1332.2009.1 >prot_E-siliculosus-1a_F_contig1332.2009.1 ID=prot_E-siliculosus-1a_F_contig1332.2009.1|Name=mRNA_E-siliculosus-1a_F_contig1332.2009.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=755bp MPVNATETRSGRGGGGLASKLFNKFDSDRKYDPFLDTDPVIQDSKEGMEAback to top mRNA from alignment at E-siliculosus-1a_F_contig1332:5338..9036+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1332.2009.1 ID=mRNA_E-siliculosus-1a_F_contig1332.2009.1|Name=mRNA_E-siliculosus-1a_F_contig1332.2009.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3699bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1332:5338..9036+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1332:5338..9036+ >mRNA_E-siliculosus-1a_F_contig1332.2009.1 ID=mRNA_E-siliculosus-1a_F_contig1332.2009.1|Name=mRNA_E-siliculosus-1a_F_contig1332.2009.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4530bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1332:5338..9036+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |