mRNA_E-siliculosus-1a_F_contig133.1999.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig133.1999.1
Unique Name	mRNA_E-siliculosus-1a_F_contig133.1999.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: D7FRH9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH9_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.620e-91
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 3

Query:  372 DIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 809
            DIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVS + T +NM    YGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG
Sbjct:   15 DIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSVDET-MNMLYARYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 159

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A7S2UTN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTN0_9STRA)

HSP 1 Score: 209 bits (531), Expect = 5.370e-63
Identity = 127/278 (45.68%), Postives = 163/278 (58.63%), Query Frame = 3

Query:   75 VMAEEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKE--------------------IHALQAKVE----GLSAAPQ------SKQAKLA----ANDXXXXXXXXXXXXXXXXXXXXXVRLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKT 806
            +  EED   NI+ QE++ L R Y+ LC F ++ KL KE                    IH ++ + E    G + A Q      S  A LA                              L ++PDKKI+A D+ E ++FLGKK T+KEV D++WEVDENLDG VDW+E++LMF RNI D TGLEP+KLYNMVQFM+YD DN   VS + T +NM    YGR++ME KL+ELFG  MRE G QGGEI FL YL+AVERTQ+NTF+ +S+G+   AKT
Sbjct:    2 MQEEEDVPQNITPQEERELVRTYNHLCHFLKRSKLEKEAAPKRARRQELIDKVQTSKKIHEIRQQQELEQNGSALAQQQIDELDSSYADLAPMGSVEMAQMQDDINQLTAEINGIESQIEALRSDPDKKIRAPDLMEALRFLGKKVTKKEVADMIWEVDENLDGCVDWEEYRLMFQRNIFDRTGLEPSKLYNMVQFMIYDHDNKGLVSVDQT-MNMLYARYGRSRMEQKLRELFGTDMRENGKQGGEIDFLTYLQAVERTQMNTFLNTSLGKTTAAKT 278

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A836CM15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM15_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.720e-59
Identity = 120/278 (43.17%), Postives = 161/278 (57.91%), Query Frame = 3

Query:   81 AEEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQ--------AKVEGLSAAPQSKQAKLAANDXXXXXXXXXXXXXXXXXXXXXVRLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNM---------------------------VQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 809
             +E+ +  IS QE++ LRRV+ +LCDF+ K+ L   +H            +V+ L     + Q +L A +                          +  +KIKA+D+ + M  LG++CT+KEV D++WEVDENLDG VDW+EF+LMF RN+ND TGLEP+KLYNM                           VQFM+YDV+ N  VS + T +NM    YGR +ME KLKELFGE MRETGTQGGEI F +YL +VERTQL TF+ +++G+A LAK G
Sbjct:    4 TDEEGLTQISPQEERELRRVFDKLCDFNAKQNLT-ALHMYMHMWNVCHTEEVDRLGGEIAALQQQLRALESP------------------------SGSQKIKAIDVSQSMAVLGRRCTKKEVMDMIWEVDENLDGCVDWEEFRLMFNRNVNDRTGLEPSKLYNMSFHAAKPRKKHAGLDDKPSHLLCLQAQVQFMVYDVNGNGLVSVDET-MNMLYARYGRARMEVKLKELFGEEMRETGTQGGEITFTQYLASVERTQLATFLGTNMGKAHLAKVG 255

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: F0Y9Y6_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Y6_AURAN)

HSP 1 Score: 182 bits (462), Expect = 7.940e-54
Identity = 93/158 (58.86%), Postives = 117/158 (74.05%), Query Frame = 3

Query:  336 LENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 809
            +E   D  I   D+ E +K LGKK  RK+V D++WEVDE+LD  V+W+E  LMF RNI D TGLEP++L+N+VQFM++D D N  VS + T +NM    YGR +MEAKLKELFG+ MRETGTQGGEI FL YL AVE+TQL TF+ S+ G+AQ+AK G
Sbjct:   23 IEAESDGLISVQDLMEALKTLGKKTPRKDVEDMIWEVDEDLDCCVNWEEMLLMFQRNIRDRTGLEPSQLFNVVQFMIFDQDENGLVSVDET-MNMLYARYGRVRMEAKLKELFGDDMRETGTQGGEIDFLTYLRAVEKTQLMTFLNSAHGKAQVAKAG 179

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A6S9HP31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HP31_HETAK)

HSP 1 Score: 184 bits (468), Expect = 1.270e-53
Identity = 105/271 (38.75%), Postives = 152/271 (56.09%), Query Frame = 3

Query:   84 EEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQAKVEGLSAA-------------------------PQSKQAKLAANDXXXXXXXXXXXXXXXXXXXXXVRLENNP----DKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 809
            EE+ ++ ++QQE++ LRRV+ RLCDF +K +L + I     +++ L                             +  + +L   +                       LE  P    ++KI+  D+ E  +FLG+  TRK+V D++WEVDENLDG VDW+EF+LMF RN+ D TGLEPA+LY+M QFM+YD  N   V+ + T   +Y   YG+ KMEAKLK LFG  M+E+GT+GG I F +YL AV++TQL TF+ +S+G+    K G
Sbjct:    6 EEEPIVPMTQQEERELRRVFERLCDFHKKMRLAQAIEPRVERMDELKKKYTVYEEPEPEDVWKMEEKTPEQLEREREARGRLEIPEGPERAEWATLSAEVEQHRAELAALERPPAGAPEQKIRPADLLEAARFLGRPATRKDVQDVIWEVDENLDGAVDWEEFRLMFERNVGDRTGLEPAQLYHMAQFMMYDARNTGRVTVDQTMSMLYAR-YGKAKMEAKLKILFGRDMKESGTEGGAITFQQYLMAVQKTQLETFLATSLGKKIAKKLG 275

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A8J2X371_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X371_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.630e-50
Identity = 102/250 (40.80%), Postives = 147/250 (58.80%), Query Frame = 3

Query:   84 EEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQAKVEGLSAAPQSKQAKLAANDXXXXXXXXXXXXXXXXXXXXXVRLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTGTKGNQAKV 833
            E +E   I+ QE+  LRRV+  LCD+  K+K+ K +   Q ++E L  +   +QA     D                       +E   D  +  VD+ E +K LG+K  +K+   ++WEVDE+LDG V WDE +LMF RNI D TGLEP++L+N+V F+++D+D +  VS + T   +Y   YGR KME +LK LFG+ M+E G  GGEI F+ YL AVE+TQL TF+QS+ G+A + K   +GN  +V
Sbjct:    5 EGNEAAEITPQEENQLRRVHRLLCDYGAKKKVLKLLRPKQDQLEKLRQSADDEQA-----DILVASEIQSLETDVEKLRQDLQEIEKKSDGLVSCVDLLEALKTLGRKAQKKDAEAMIWEVDEDLDGCVSWDEMRLMFQRNIRDTTGLEPSQLFNVVMFLIFDLDEDGMVSVDETMELLYAR-YGRHKMEDRLKMLFGDDMKEEGKGGGEIDFVTYLRAVEKTQLATFLQSNYGKALVNKK--QGNPERV 246

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A812T3T1_SYMMI (Cam1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T3T1_SYMMI)

HSP 1 Score: 166 bits (420), Expect = 1.930e-47
Identity = 80/150 (53.33%), Postives = 109/150 (72.67%), Query Frame = 3

Query:  336 LENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVG 785
            LE NPD+KI   DI E ++ L  K  +KEV +++WEVD++LDG +DW EF+LMF RNI D+ GLEP+K++N+ QF++YD + N  VS + T +NM    YGRTKME KLKELFGE M ETG +GGEI + E++ AVE+ Q+ TF  ++ G
Sbjct:   33 LETNPDRKISCNDILEMLRRLKAKTNKKEVQEMIWEVDDDLDGCIDWGEFRLMFTRNIMDNCGLEPSKMFNLTQFLIYDHNCNGRVSVDET-MNMLYARYGRTKMETKLKELFGENMHETGREGGEISYQEFIRAVEKVQVQTFWGTTQG 181

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A5A8DI08_CAFRO (EF-hand domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DI08_CAFRO)

HSP 1 Score: 145 bits (367), Expect = 7.890e-39
Identity = 86/223 (38.57%), Postives = 126/223 (56.50%), Query Frame = 3

Query:  102 NISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQAKVEGLSAAPQSKQAKLAANDXXXXXXXXXXXXXXXXXXXXXV-------RLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVER 749
            +++Q E K L RV++ LCDF+ K KL KE      +   + A  ++ +A    ++                             ++E   +KKIK  D+ E +  LGKK T+KE+ D++WEVDENLDG VDW+EF+LMF RNI D TGLEP +L+N+VQFM+YD D    VS + T   +Y   YGR  ++++++ LFG+ +  TG     + F +YL AVER
Sbjct:   16 DVTQDESKQLERVFNYLCDFAAKNKLFKEREPKLERKSKILAYKKNPEAVKIIDETGRELSPEEIDFELRKIDDECADITQRIEKIEAKEEKKIKPRDLLEALGKLGKKATKKEIEDMIWEVDENLDGCVDWEEFQLMFHRNIKDTTGLEPHQLFNVVQFMMYDKDCGGQVSVDETMHMLYSR-YGREGLDSEMRNLFGDSLSATGD--ARLTFEQYLAAVER 235

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A2R5GQD3_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD3_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.780e-38
Identity = 83/224 (37.05%), Postives = 135/224 (60.27%), Query Frame = 3

Query:  105 ISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQAKVEGLSA---APQS-----KQAKLAANDXXXXXXXXXXXXXXXXXXXXXVRLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERT 752
            ISQ E+K L RVY+ +C++  K KL   +   +A+ + L A   AP +     K+ +  +++                     V L+++P ++I+  D+ E +K LGK  ++KE+ +++WEVDE+LDG+VDW+EFKL + RN+ D TGLEP +L+N++QFM+YD D +  V+ + T ++M    YGR ++E ++K LFGE +  T    GE+ F EY  A++RT
Sbjct:   11 ISQNEEKELLRVYNTMCNYQPKSKLYARLQPQRARRDRLVAHRKAPDNIVVTNKEGEAMSSEEIEAEYETLRQEIAALEKEVAV-LDSDPQRRIRPADLAECLKTLGKPNSKKEIEEMIWEVDESLDGVVDWEEFKLTYQRNLADTTGLEPCQLFNVIQFMIYDKDGSGKVTVDET-MHMLYTRYGRDRLEGQMKLLFGEDL-STQDGDGELSFSEYCVAIQRT 231

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BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Match: A0A813C532_9DINO (TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C532_9DINO)

HSP 1 Score: 143 bits (360), Expect = 1.060e-37
Identity = 87/228 (38.16%), Postives = 130/228 (57.02%), Query Frame = 3

Query:   81 AEEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKEIHA-LQAKVEGLSAAPQSKQAKLA------ANDXXXXXXXXXXXXXXXXXXXXXVRLENNPDKKIKAVDIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAV 743
            AE +   +++  E K L RV+  LCDF+ K KL   +   L+ K + LS     +  KL        +D                       +++  DKK+K  D+ E + FLGK+ ++KE+ D++WEVDENLDG VDW+EF+LMF RNI D TG EP +L+N+VQFM+YDVD +  VS + T ++M    YG+ ++E ++K LFG+ +       G + FL+YL+AV
Sbjct:   25 AEPEAPKDVTANELKELERVFEFLCDFAPKNKLNNLLKPKLERKQKILSYKKNPEAVKLEDDTGRELSDDLIDAELQRLEEEIGDIEAQINTIKSKQDKKVKPKDLQEALAFLGKRSSKKEIEDMIWEVDENLDGCVDWEEFQLMFQRNIKDTTGKEPFQLFNVVQFMMYDVDFSGEVSVDET-MHMLYARYGKARLEREMKALFGDKLHNGN---GTLTFLDYLKAV 248

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig133.1999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRH9_ECTSI	1.620e-91	93.84	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A7S2UTN0_9STRA	5.370e-63	45.68	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CM15_9STRA	1.720e-59	43.17	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
F0Y9Y6_AURAN	7.940e-54	58.86	EF-hand domain-containing protein n=1 Tax=Aureococ...	[more]
A0A6S9HP31_HETAK	1.270e-53	38.75	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A8J2X371_9STRA	1.630e-50	40.80	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A812T3T1_SYMMI	1.930e-47	53.33	Cam1 protein n=1 Tax=Symbiodinium microadriaticum ...	[more]
A0A5A8DI08_CAFRO	7.890e-39	38.57	EF-hand domain-containing protein n=2 Tax=Sar TaxI...	[more]
A0A2R5GQD3_9STRA	2.780e-38	37.05	Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=23...	[more]
A0A813C532_9DINO	1.060e-37	38.16	TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig133	contig	E-siliculosus-1a_F_contig133:75606..81027 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	762
Model size	839
Exons	8
Ec32 ortholog	Ec-09_000020.1
Ec32 ortholog description	EF-hand domain pair
Hectar predicted targeting category	other localisation
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	S
EggNOG OGs	2CS8I@1,2RAUZ@2759
EggNOG free text desc.	EF-hand domain pair
Seed eggNOG ortholog	2880.D7FRH9
Seed ortholog evalue	3.1e-72
Seed ortholog score	278.5
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927851.2501159-UTR-E-siliculosus-1a_F_contig133:75605..75682	1622927851.2501159-UTR-E-siliculosus-1a_F_contig133:75605..75682	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig133 75606..75682 +
1696318708.0476453-UTR-E-siliculosus-1a_F_contig133:75605..75682	1696318708.0476453-UTR-E-siliculosus-1a_F_contig133:75605..75682	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig133 75606..75682 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig133.1999.1	prot_E-siliculosus-1a_F_contig133.1999.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig133 75683..81027 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig133:75606..81027+
coding sequence from alignment at E-siliculosus-1a_F_contig133:75606..81027+

protein sequence of mRNA_E-siliculosus-1a_F_contig133.1999.1

>prot_E-siliculosus-1a_F_contig133.1999.1 ID=prot_E-siliculosus-1a_F_contig133.1999.1|Name=mRNA_E-siliculosus-1a_F_contig133.1999.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=254bp
MAEEDEVINISQQEDKGLRRVYHRLCDFSQKEKLRKEIHALQAKVEGLSA
APQSKQAKLAANDANVKAEENRLNEEIRALEQEIVRLENNPDKKIKAVDI
WEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGL
EPAKLYNMVQFMLYDVDNNVNVSYESTRLNMYPLLYGRTKMEAKLKELFG
EGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTGTKGNQA
KVT*

mRNA from alignment at E-siliculosus-1a_F_contig133:75606..81027+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig133.1999.1 ID=mRNA_E-siliculosus-1a_F_contig133.1999.1|Name=mRNA_E-siliculosus-1a_F_contig133.1999.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5422bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:75606..81027+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCGCCGAGAACAGCCCCCTCTCCTCCTAGACCACAAAACGGAGTAGCTT
GTACCATACCTGATATCCTGGGAGGTGATGGCTGAGGAGGACGAAGTGAT
CAATATCTCACAACAGGAGGACAAGGGTCTGAGAAGAGTGTACCATCGTC
TGTGCGACTTCAGCCAAAAGGAAAAGTAAGCAAGGATGCAGGACAGTGCC
GTTCCTCCCAACTAAACCCATATACAGTAGCTGAAGTTTGACTGGATGCG
CGTGTGAGCCAACAACATCGCCCATGTCGTCAGTATACCCTGTTTTTTTC
TGAGAAAAAGTTTATTTGCGTTCACATTGTCTCGTACGCATACGCATAAA
AAATTGTGTACATAGTCTCATAGTCGGGCAGTACGTGTTCGATCGCGGCC
CTGTCCTTCGGAACCCCCCACGCCAGCGTACAATGTACTAGAACAACACT
GTTGTAGCCTTGGGCCGTGCTAGCCACTCGGCGCAGCAGTGGCTGCAGCC
TCATGTCGCCAAGTCCGTGGCAAACCTTTCAAAACAGCCAGAAAAAAGCA
CCAAAGCATCAGTCCTCTCGTAAGCAACCGGGGCCGCCCGATTCTTGTAT
TCCAGGCGGAGAAACAACACGAGCGTTCTACTGCTGTACGTTTACGTTGC
TCATGGCGCTTTGTAATTGATCACTGTATGTTAAATAACTGCTGTTGTTG
GTACAACGTAGCGGTATTTCCCGTATTTTGGATACGAACACAAGTTGTAT
TGGTTGTGTGAAGCAACGCCCCGTCCCGAGGTAACACGCCGCACAATGCG
ACTTGATCCCCTTTCAGTTTGTAGGTGCCATACCGTACTTGACATGTAGC
GGATGATCGCCCCGATTCTTTGCGCACCTGGCACACGCCTGCAGCATCAC
CTGAACGTGTGGAGATCAAATCTCGAGAAGAACCAATGATTGGTACTCGT
TGTACCTCTTGCTCGGACGAAAAGGAGAGAGAGGCTGACTTTCTTCAGTT
CCAGGCAACGCCCAGCCTCGGCTCCGTTTCAGTTTCAGTTTTCAACATAT
CGGCCTCATTTCTTTTAGCGAACTTCGCTGTGGGAAGAAAGGGTTGTTAA
TGTCTCTGTTCGCCGTTTCGGTTTACAAGGCATTAGGTCTCAGCAGGAAC
TGTTCACTGTGGATCGCTTACAAACACGTTATGCTAGCCGTCAATTTCTC
CTCATGTCCCCACAGGCTTCGGAAGGAGATCCACGCATTGCAGGCAAAGG
TGGAGGGGCTTTCGGCCGCACCACAGTCGAAGCAGGCGAAGCTTGCGGCC
AACGATGCGAACGTAAAGGCAGAGGTACGCGAGAACTGGCATGGCATCAT
GACGTTACAAGCCTGTATGTTCGTGTTAGCCTGGTGGAAGTCGGCGAGTA
GCGATCCACAACTACATGCTCCTACGTATGCAACAATGACTCAGAGGTAG
AGCTCGACAAATTCAAGAGTTCGCGCAGAACACCTACTGCCCCCAGTTGA
AGACCCCAGGGCCACAGGTATTGGAACATGATACCAGCTCGCCTCATACT
ATGGGTCATTTCAGTATCTTTACTCATCCCCACGCTCCACATTGCACGAC
ACACAGCACTTGAGAAACATCCGATACTCTACCGTTCTAAGGCAAGGCCG
GCTTCCCCCGTTCGCGTGGAAAGCATTGAACAGGCCCTGAATGACCTGGA
CATTTAAAACACCTACAGTAGACCTGATTGAGCTCTCAAGGCGAACATGA
ATGGATGTTTGGGGATCTGTAGTATTAGTAGGGGTTCTCACGAACGGTTC
CACAGCCGAGTTAGGCCAGTGAAAGACTCAAGCGTGGTTACGATTGCGGT
TAACCACTTCCCATTACGGCGAAGCGTGGGCGAAATACACTGTCCAATGA
ACGATTTTCGCACGGCGAAAGACTCAGGCAACCTATATTAGAAAATGATG
TTTCGGACTGCGTCTCGTTGATGCATCATTTCAGTGACCGTTGGTTACGT
TTGGTTCCGGGAAAATCAAGTAGAAAATACGCATACGTACACGCTCCCTG
AGCACAAGCTGTCAGAATGTTTTATTCCTCCTGACTGCCTACGCAAAGAA
ATTAAGCATATTTCGAAAAAATACCAGACAGGGGGCACGCGGACCCTAAT
CCTAACTTAGCCGATTGTGTGCTCTGTCCAGCATGTTTGCTTGGACTTAG
AAAACCTGCGTAGACTACTGAAACCTCCACCGTGGTGCTAGGTGTTTCAG
TCGTGCCACCGGTGGGGTCGCCGCGTTTGATGTTATTTCTTTCTTTTTCT
AACAGGAAAACAGGCTCAACGAGGAAATTCGCGCACTGGAGCAGGAAATT
GTCCGCCTAGAGAACAATCCAGATAAAAAGATCAAAGCCGTGGTGAGAAT
AGAGTCATACGACAAACACCATCAGTCGACCTCTATGGGCCGCAGTAGTA
AGTGACCTTGGGGCGGTAGGGTCGATCATTGTGATGGAAGTCGTTATACC
TATTTTCGGCCATGCCAGCATGCCTGAAAGACTCTTGGAACACCTTCCAT
TATGCTGCAAAGAGTTGCAAATTCACCCGAAGCATACAACAAGGTAAATG
CAAATCGTCGTTCCAACAGCAAATCATCGTTTCCTAACAGGCGTGTTTCA
CACCCCATAGCCATTCTTTCATTGAAAATCGCAATGACAGGACATCTGGG
AGCACATGAAGTTTTTGGGGAAGAAGTGCACGAGGAAGGAAGTGACGGAC
ATTGTTTGGGAAGTGGACGAGAACTTGGATGGCTTGGTAGACTGGTGAGG
GACGTAGCGCGGCACTTCGAATTTTAATATGACTACGCATGCTGCTTCAA
GTCACGATTTCATGTAGCCGACTGTACTTTTTTTAACTGAAGACTGAAAG
ATGTGGCAGGACTTGCATGTAGGGCTGGCGAACGCTTGAATGACCCAATG
GCTGGTGAGCGTGCGGTGAACGTTCCACAAAGGTTTCCAACGACACCACG
TTCACTCGCACACCCTAGAGCAGCCACGAGAGTTTCCTTGCTAAGTCGGC
AACTTCAGTCTGATACCTCGCGAAGGGTGCGCGTTGTACGACACTGCCCG
CCCTCGTTGAACATCACATGTTTCTGGAAGCGGAACATCGTACGAGGCAA
TAATGATTCTTTCAGATCGTGCATCCATGCGGTACACCGTATGTGTTGCA
TTCCAAATCTACAATAGAGTGATGCATGCTTGAATTGTTTTCCTTGGTTG
CACGCGCTAAAACAAAAACGTTTGCCCTTTCCCACGGTCTCTTGCTGCAA
CGCGTGAAAGGGACGAGTTTAAGCTCATGTTCTTCCGAAACATTAACGAC
CACACGGGCCTCGAACCGGCAAAGCTGTACAACATGGTGCAGTTCATGCT
GTACGACGTGGACAACAACGTCAATGTGTCCGTGGACGAGACCATGAATA
TGCTCTACGCCAGGCAAGCAAAAAATACAGGAAAATCTTCACGACTGCAT
GCTGAACAATCGCAGGCTATATAAACTTCAGGAAATAGCTGAGGCTTTCT
GTATTGGACCATACCACTATGGAATGCAGGATGAACGAGATTCTAGGCAC
CACGGCAGCCCAGTGGGGCGTTGATACGCGTTGATGAGGCAAGCGGTTAC
ATAGCGACGCATTGTTGATCAACGAGATGGATTTTCAACCATTGCTAGGG
AAACTGGGTGTGCAATGAGGGAGGTGTGAGATGCGCCTACATGTTGCTGC
ATACACCAGCCCCGGCTTGTACCACGTTTGCGGTTGGGTCACACCTTCAG
CTCTCAAGTATGAAAGCACACGGCTTAACATGTACCCTTTATTGTCGCAT
CCCGCAGCACACCACGTCCAAAGTCATACTCGGTCAGAACAACTCCGCGA
GCGTGATGCGCTCTACATAATGTTCTGAATGACCGACGGCCGCGTCGGTT
CGAGTTGGGATAGCTCGTGCGTGCGTATCTGCGTTTGTTTCTCACCAAGA
CGTTTATTGCCCCTCACGCTGGCGGTCCCTTGACACCGTGCTTGTCCTTA
CGGGTGAAACTGTGCGTTTGGCGAATATAAAGCAACTGGATAATGTCATT
AGGATAGCGACCTACCTCTCCAAGGCGTACAAATAGGGCTATGACGGCCG
GCCGTTTTCCGTCAACGTCGTCACTATCGCTGACGACCCGATAGGTATGG
GCGAACCAAGATGGAAGCGAAGCTAAAGGAACTGTTCGGGGAAGGTATGC
GAGAGACGGGGACGCAGGTGAGGTGTGTGCATTGTCCTCTTTCTTTTCTT
CACGCAGTAACAACGTTTCAGGTGATTACGCCGAAACTCACAACCAGATG
AAGCAACGTCCTGCAGTTTTAGTCCAGAAGTGTTTAGCTCTGCTCGAATG
CATTTAGTTCCGCGTACGTGTTTCGATGAGGTCTCACGCCCTACTCATTG
CGAGCTCTAGAGAAGGCGGGAAGGTCCGAGCATGACTGAAACTACGTGGA
AGTTTGCAATGGCGTGGTTTAGGTTCGTGTTTTACGATATAATGTTGCAC
GAGCGTAGGTGCACGGAGGGAGGGACATACTTCAGAATAGAATAAAGAAG
CAGGTGCTATACTAGACATGGGGACGGCGGTCTGTCGGAGATTACACGGC
AAGTCACACGCATAACGGGCCGTCTGCATGTATTCCAACGCACAAATATC
CAGCTCCGCCGGTGTTCGTGTATGCTTGTGTAAGGCGTCCCATTCATCCT
GAACGTCAGATCTACACTGTTGCGTTTTCTGTACGAGTTCCGGGTGCAAT
TTCGGGGTTGTTTCAACTACAGTACGTATTTGGTATGTAGTGTATGCCAG
AGACAAGACAGAGCCGAGGAAAACGTTAAATTCTGGTACCACCGAATAGA
TACGGCCCTGCACGAGACATTCCTTCAAAGGTTCCCAAAGGAAACACTTT
TCAAGACACGAGATTAGTCGGTATCGCAACAACGATTTACGGCTTGAATT
GCTTGGCGCCTCGGAGAATTTTCCGATCTGGTGTTTTCTTCCAGAGCTCG
TTGCCTTAGCGGTTGTTTGGACGTTCAGATAAAGGTTCGTGCCCATGGGG
AAAAAAGGTCTGTTGCCTGACACCGGCACGAGATGGAGAACATCACCCGA
TCGATCCCGAGCTCAGCGGCAGAGGCGTTTTGGCTTGCGCACCCCGATAG
TAAATCCACCAAGCAAATCCAGGGCGATAGGATGTTCGGCCATGTAGGAA
ACTAACATATTTTCGTCCCAATTCGTTGGCAATATAGGGCGGTGAAATAG
GTTTCTTGGAGTACTTGGAAGCCGTGGAGAGGACGCAGCTCAATACCTTC
GTACAGTCTTCCGTTGGGCGCGCGCAGCTAGCGAAGACAGGTACGAAGGG
AAACCAAGCGAAAGTGACTTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig133:75606..81027+

>mRNA_E-siliculosus-1a_F_contig133.1999.1 ID=mRNA_E-siliculosus-1a_F_contig133.1999.1|Name=mRNA_E-siliculosus-1a_F_contig133.1999.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1524bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:75606..81027+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTGAGGAGGACGAAGTGATCAATATCTCACAACAGGAGGACAAGGG
TCTGAGAAGAGTGTACCATCGTCTGTGCGACTTCAGCCAAAAGGAAAAAT
GGCTGAGGAGGACGAAGTGATCAATATCTCACAACAGGAGGACAAGGGTC
TGAGAAGAGTGTACCATCGTCTGTGCGACTTCAGCCAAAAGGAAAAGCTT
CGGAAGGAGATCCACGCATTGCAGGCAAAGGTGGAGGGGCTTTCGGCCGC
ACCACAGTCGAAGCAGGCGAAGCTTGCGGCCAACGATGCGAACGTAAAGG
CAGAGGCTTCGGAAGGAGATCCACGCATTGCAGGCAAAGGTGGAGGGGCT
TTCGGCCGCACCACAGTCGAAGCAGGCGAAGCTTGCGGCCAACGATGCGA
ACGTAAAGGCAGAGGAAAACAGGCTCAACGAGGAAATTCGCGCACTGGAG
CAGGAAATTGTCCGCCTAGAGAACAATCCAGATAAAAAGATCAAAGCCGT
GGAAAACAGGCTCAACGAGGAAATTCGCGCACTGGAGCAGGAAATTGTCC
GCCTAGAGAACAATCCAGATAAAAAGATCAAAGCCGTGGACATCTGGGAG
CACATGAAGTTTTTGGGGAAGAAGTGCACGAGGAAGGAAGTGACGGACAT
TGTTTGGGAAGTGGACGAGAACTTGGATGGCTTGGTAGACTGGACATCTG
GGAGCACATGAAGTTTTTGGGGAAGAAGTGCACGAGGAAGGAAGTGACGG
ACATTGTTTGGGAAGTGGACGAGAACTTGGATGGCTTGGTAGACTGGGAC
GAGTTTAAGCTCATGTTCTTCCGAAACATTAACGACCACACGGGCCTCGA
ACCGGCAAAGCTGTACAACATGGTGCAGTTCATGCTGTACGACGTGGACA
ACAACGTCAATGTGTCCGGACGAGTTTAAGCTCATGTTCTTCCGAAACAT
TAACGACCACACGGGCCTCGAACCGGCAAAGCTGTACAACATGGTGCAGT
TCATGCTGTACGACGTGGACAACAACGTCAATGTGTCCTATGAAAGCACA
CGGCTTAACATGTACCCTTTATTTATGAAAGCACACGGCTTAACATGTAC
CCTTTATTGTATGGGCGAACCAAGATGGAAGCGAAGCTAAAGGAACTGTT
CGGGGAAGGTATGCGAGAGACGGGGACGCAGGTATGGGCGAACCAAGATG
GAAGCGAAGCTAAAGGAACTGTTCGGGGAAGGTATGCGAGAGACGGGGAC
GCAGGGCGGTGAAATAGGTTTCTTGGAGTACTTGGAAGCCGTGGAGAGGA
CGCAGCTCAATACCTTCGTACAGTCTTCCGTTGGGCGCGCGCAGCTAGCG
AAGACAGGTACGAAGGGAAACCAAGCGAAAGTGACTTGAGGCGGTGAAAT
AGGTTTCTTGGAGTACTTGGAAGCCGTGGAGAGGACGCAGCTCAATACCT
TCGTACAGTCTTCCGTTGGGCGCGCGCAGCTAGCGAAGACAGGTACGAAG
GGAAACCAAGCGAAAGTGACTTGA