mRNA_E-siliculosus-1a_F_contig133.1997.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A6H5L8J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8J4_9PHAE) HSP 1 Score: 1138 bits (2944), Expect = 0.000e+0 Identity = 643/875 (73.49%), Postives = 671/875 (76.69%), Query Frame = 2
Query: 794 TATRPVSFNSRRQHQDRPQSDNARANPSKPGTASHAKPSHVRGRGDHNSGXXXXXXXXXILSRLGSPPSSPRMANEDRADDN-NPTVLXXXXXXXXXXXXXLSRTDDNTNRKHDRRGAHRSGASTLSRTSDAAKREAQLGSNDARQPLPHPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS--FSPSSRRGGVVNNA----AKSRSGRQRDDSGSGDNNPSGSRKGESELSRVSGGRPGAGGCSVPVHRTGVKSSGNGREGYRIDLDGAQHG-MRQKQRQQQQDKYARGTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELL-RPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIFFQGARAELPSQILNHHQHHHLGADEYLCLQAVHALATAISNGNSSSGGDTRLGDAAGEQGVGRLFTTTVSKLCSGSSFFLLSPTNHCDGEGRDAGIASTAVTNPVEGGILPAPVSFRTAFPKMATAVRILAVVRDGNWSEFFRLLGNFTSKPNDDAIREGKTLLVGGENASSPFAVRLRCVCHGMLLPVRAHALRAMNKAYGKSEKVPL----------ADVARMLRARDEEHAEGICRALSLPIEEIKHGDGSNTSGHQTDAKDQPKAVVFKCVPAVWKSETAKKTGSFCGTNSGNARGSCTLREDDWVGLTRALAASASHKNRXXXXXXXXXXXXXXXTACAGFGCSWCENGIVKAEEGISRLAQEEEEGLWQVALCPTRKATRGCK 3361
TATRPVSFNSRRQHQD PQSDN RA+PSKPGTASHAKPSHVRGRGD NSG ILSRLGSPP SPR+ N+DRADDN NP V LSR DDNTNRKHDRRGAHRS A+TLSRTS+AAK EA+LGSNDA QPLPHP A S+ FSPSSR GGVVNNA AKSRSGRQRD+ G GD+NP GSRKG SRVSGGRP AG +VPVHRTG KSSG+GREG+RID A+H M QKQ+QQQQDKYARGTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQR+ADP KAVKKYRRSAAGRDMH +L RP QD F P R L +AYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAG GVFSSL E+FFQGARAELPSQILNHHQHHHLG DEYLCLQAVHALATAISN NSSSGG T+LGDAAGEQGVGRLFTTTVSKL SGSSF LLSPTN CDGEG DAGI+STAVTNPVEG ILPAPVSFRTAFPKMATAVRILAVVRDGNWSEFFRLLG+FT KPNDDAIREGKTLLVGGE+ASSPFAVRLRCVCHGMLLPVRAHALRAMNKAYGKSEKVPL ADVAR+LRARDEEHAEGIC +LSLPIEEIKHGDGSNT HQTDAKDQPKAVVFKCVPAVWKSETAKKTG FCGTNSG+AR CTLREDDWVGLTRALAASAS KNR ACAGFGCSWC+NGIVKAE+GISRLA+EEEEGLWQVALCPT K T GCK
Sbjct: 27 TATRPVSFNSRRQHQDPPQSDNTRAHPSKPGTASHAKPSHVRGRGDCNSGSGGGKGGGGILSRLGSPPRSPRVGNQDRADDNTNPNVHGRPGCPPPSPRNALSRKDDNTNRKHDRRGAHRSSAATLSRTSEAAKGEARLGSNDAGQPLPHPLAAAKATTAKQGRTEHHRQKQPGNAASGANSRNGSGGSNPAFSPSSRSGGVVNNAVNNAAKSRSGRQRDEGGRGDSNPVGSRKGXXXXSRVSGGRPDAGATAVPVHRTGEKSSGSGREGFRIDRYCAEHSSMLQKQQQQQQDKYARGTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRIADPKKAVKKYRRSAAGRDMHRSQLRSRPK-----------QDEF-------------PLRGSECRVELLALEAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGL---------------------GVFSSLAELFFQGARAELPSQILNHHQHHHLGVDEYLCLQAVHALATAISNRNSSSGGGTQLGDAAGEQGVGRLFTTTVSKLSSGSSFSLLSPTNPCDGEGEDAGISSTAVTNPVEGRILPAPVSFRTAFPKMATAVRILAVVRDGNWSEFFRLLGDFTPKPNDDAIREGKTLLVGGEHASSPFAVRLRCVCHGMLLPVRAHALRAMNKAYGKSEKVPLVSGSLFGSGQADVARILRARDEEHAEGICSSLSLPIEEIKHGDGSNTGVHQTDAKDQPKAVVFKCVPAVWKSETAKKTGYFCGTNSGDAR-RCTLREDDWVGLTRALAASASAKNRSSSADSNKTAATATCDACAGFGCSWCDNGIVKAEDGISRLAKEEEEGLWQVALCPTSKTTHGCK 855
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: D7FRI1_ECTSI (SAC3_GANP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI1_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 9.770e-224 Identity = 349/377 (92.57%), Postives = 354/377 (93.90%), Query Frame = 2
Query: 2231 GARAELPSQILNHHQHHHLGADEYLCLQAVHALATAISNGNSSSGGDTRLGDAAGEQGVGRLFTTTVSKLCSGSSFFLLSPTNHCDGEGRDAGIASTAVTNPVEGGILPAPVSFRTAFPKMATAVRILAVVRDGNWSEFFRLLGNFTSKPNDDAIREGKTLLVGGENASSPFAVRLRCVCHGMLLPVRAHALRAMNKAYGKSEKVPLADVARMLRARDEEHAEGICRALSLPIEEIKHGDGSNTSGHQTDAKDQPKAVVFKCVPAVWKSETAKKTGSFCGTNSGNARGSCTLREDDWVGLTRALAASASHKNRXXXXXXXXXXXXXXXTACAGFGCSWCENGIVKAEEGISRLAQEEEEGLWQVALCPTRKATRGCK 3361
GARAELPSQILNHHQHHHLG DEYLCLQAVHALATAISNGN SSGGD +LGDAAGEQGVGRLFTTTVSKLC GSSF+L P+N DGEGRDAGIASTAVT PVEG ILPAP+SFRTAFPKMATAVRILAVVRDGNWSEFFRLLGNFT KPND AIREG LLVGGENASSPFAVRLRCVCH MLLPVRAHALRAMNKAYGKSEKVPLADVARMLRARDEEHAEGICRALSLPIEEIKHGDGSNTSGHQTDAKDQP+AVVFKCVPAVWKSETAKKT FCGTNSGNARGSCTLREDDWVGLTRALAASAS KNR XXXXXXXXXXXXXXTACAGFGCSWCENGIVKAEEGISRLAQEEEEGLWQVALCPT K T G K
Sbjct: 19 GARAELPSQILNHHQHHHLGGDEYLCLQAVHALATAISNGNGSSGGDPQLGDAAGEQGVGRLFTTTVSKLCGGSSFYLPPPSNQSDGEGRDAGIASTAVTYPVEGRILPAPMSFRTAFPKMATAVRILAVVRDGNWSEFFRLLGNFTPKPND-AIREGTKLLVGGENASSPFAVRLRCVCHVMLLPVRAHALRAMNKAYGKSEKVPLADVARMLRARDEEHAEGICRALSLPIEEIKHGDGSNTSGHQTDAKDQPQAVVFKCVPAVWKSETAKKTSFFCGTNSGNARGSCTLREDDWVGLTRALAASASDKNRSXXXXXXXXXXXXXXTACAGFGCSWCENGIVKAEEGISRLAQEEEEGLWQVALCPTCKTTHGRK 394
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A6P7ZGJ5_9AMPH (SAC3 domain-containing protein 1 n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7ZGJ5_9AMPH) HSP 1 Score: 103 bits (257), Expect = 7.480e-20 Identity = 76/193 (39.38%), Postives = 102/193 (52.85%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDE-ARMNVFDRHLHTRELQGVFSSLTEIFFQGA 2236
GTC+SMCPE ER+ERE + L FE T G+ + ADP K VK+Y R AAG++ P LRP +VL T QYLV++V PR + Y FV DRLRAVRQD+ VQ ++G T A +L+ F + A Y MS E ++ FD LH+R ++ FS L + + G+
Sbjct: 16 GTCLSMCPEQERKERELQHRLHRFEVLAGTEGSHLPQ----ADPRKTVKEYSRPAAGKNAPRPSDLRPPAVLLKTVQYLVEEVV-------------PRTDASWG------EIYTFVSDRLRAVRQDMIVQ--RVQGKTCTA-LLEPILAFLLCASYFMSHEDSKPYQFDSALHSRHVRECFSWLLQCYKDGS 182
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: UPI0011298129 (SAC3 domain-containing protein 1 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI0011298129) HSP 1 Score: 103 bits (257), Expect = 7.480e-20 Identity = 80/220 (36.36%), Postives = 112/220 (50.91%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEA-RMNVFDRHLHTRELQGVFSSLTEIF---FQGARAELPSQILNHHQHHHLGADEYLC 2308
GTC++MCPE ER ERE + L FE T G RQ ADP+K VK+Y R AAG+++ P LRP +VL T +YL+++V PR + Y FV DRLR+VRQD+ VQ + E +L+ T F + AGY +S EA +++ FD LH ++ FS L + + G AE + L + LG+ E +C
Sbjct: 16 GTCLTMCPEQERMERELQHRLHRFEMLAGTEG----HRQPQADPHKTVKEYSRPAAGKNVPQPTDLRPPAVLLKTVRYLMEEVV-------------PRTDASWR------ELYTFVSDRLRSVRQDMIVQRVHGED---CVTLLEPTLAFLLCAGYCVSQEASKLHHFDSTLHAGHMRECFSWLLQCYKAGIPGREAEFQALFLLYD----LGSPEAIC 205
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: K7GAX4_PELSI (SAC3_GANP domain-containing protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7GAX4_PELSI) HSP 1 Score: 97.8 bits (242), Expect = 1.210e-17 Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 2
Query: 1646 DKYARGTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIF 2224
D++ GTC MCP+SE +RE +G L E E T R DP++ VK+Y R AAG+++ P+ LRP VL TT +YL+ V + A A+ Y FV DRLRAVRQD T+Q L+G A +L+ + + + AGY + E + FD HLH+ +LQ FS L +
Sbjct: 66 DEFLVGTCPRMCPQSELTQRERQGRLHRLELQEGT---------RQGDPDRVVKEYSRPAAGKELPRPQELRPAPVLLTTVRYLLGQVTS-------------------RADLPPAEVYAFVSDRLRAVRQDATLQ--RLQGAPCVA-LLERSLGYLLHAGYRLCQEPPAH-FDPHLHSTQLQECFSWLRRCY 226
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A2G9RT46_LITCT (SAC3_GANP domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RT46_LITCT) HSP 1 Score: 95.5 bits (236), Expect = 7.240e-17 Identity = 75/196 (38.27%), Postives = 107/196 (54.59%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQR---VADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIFFQGAR 2239
G C+ MC E ERRERE G L E FR +ADP + VK+Y R AAG+++ SP LRP + L T QYL+ +++ V+ Q ++TSL A AY FV DRLRAVRQDLTVQ ++ GT GA VL+ + F + A YL+ D + + LH+ +++ F+ L + + +G +
Sbjct: 52 GLCLDMCSERERREREQHGLLHPLEMQNRHLQ-KRGFRHGGHPIADPGRTVKEYSRPAAGKELSSPRNLRPPATLLKTVQYLIMEIWEE-------VNEQ-------DSTSL-ALAYPFVFDRLRAVRQDLTVQRIS--GTEGAP-VLEGSLGFLLCAPYLVRD-LPLEDYSETLHSTQVRESFAELMQCYNRGGK 227
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A8C5Q3Z2_9ANUR (SAC3 domain containing 1 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5Q3Z2_9ANUR) HSP 1 Score: 94.4 bits (233), Expect = 1.110e-16 Identity = 73/193 (37.82%), Postives = 105/193 (54.40%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRV-----ADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIF 2224
G C+ MCP ER++R+ G L FE AG SVS RV ADP K VK+Y R AAG+++ P LRP VL T +YL+ +V+ A + +G +A+AY FV DR+RAVRQDLTVQ + G +GA VL+ + F + + YL+ D + ++ LH +++ F+ L E +
Sbjct: 10 GQCLDMCPAKERKQRQQLGRLHRFEMQ---AGCSVSKGCRVKSLPLADPAKTVKEYSRPAAGKELSLPCDLRPPPVLLKTVRYLLMEVWDRAIDTGAGS---------------LAEAYSFVFDRVRAVRQDLTVQ--RIRGRSGAL-VLEGSLGFLLCSPYLVRD-LPLETYNVVLHGNQVRESFAELMECY 180
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A224Z0L2_9ACAR (SAC3 domain-containing protein 1 n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224Z0L2_9ACAR) HSP 1 Score: 93.2 bits (230), Expect = 1.160e-16 Identity = 74/192 (38.54%), Postives = 98/192 (51.04%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIFFQGA 2236
GTC MCP ER+ RE E L FE + T S + AD NKA+K++ RSAAG+ + + LRP VL TT YL++ V A +CS S N T Y FV DRL AVRQD+T+QGL E+L+ FY+ A + +E MN FD H++ + LQ L ++ Q A
Sbjct: 35 GTCQDMCPPRERQWREKERLLHPFEIADGT----ESDARPKADRNKAIKQFSRSAAGQREATSDELRPPQVLLKTTAYLMR-VIAPSCSGDSW-----------NDT------YHFVWDRLWAVRQDMTIQGL---NGGECIEILEQAVRFYVYAAFRCFEED-MNAFDPHINNQHLQECLKRLLVLYQQSA 200
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: A0A667YNV4_9TELE (SAC3 domain containing 1 n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YNV4_9TELE) HSP 1 Score: 94.0 bits (232), Expect = 2.150e-16 Identity = 74/201 (36.82%), Postives = 102/201 (50.75%), Query Frame = 2
Query: 1637 QQQDKYARGTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQRVADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLA-LEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIFFQGA 2236
Q+Q+ RG+C SMCP E REREA+ L FE E T R+ ADP++ VK+Y R AAG+D P LRP +VL T YL+ DV A P H + Y FV DRLR+V+QD+ +Q ++ LE T +L+ T F I A Y + E + ++D ++ LQ S L + + GA
Sbjct: 50 QEQETVPRGSCQSMCPLRELREREAQKRLHRFEILEGT----EKDRRPRADPSRIVKEYSRPAAGKDSTIPTDLRPPAVLLKTVCYLIDDVAA-----------SPSLHPW-------TEVYNFVFDRLRSVKQDMIIQRVSGLESMT----ILELTVRFLIYASYRLCGEP-LRLYDPRINDTHLQESLSWLLDCYATGA 223
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Match: UPI000854E9B1 (SAC3 domain-containing protein 1 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854E9B1) HSP 1 Score: 93.2 bits (230), Expect = 2.440e-16 Identity = 74/196 (37.76%), Postives = 104/196 (53.06%), Query Frame = 2
Query: 1661 GTCMSMCPESERREREAEGGLSSFEATEATAGASVSFRQR---VADPNKAVKKYRRSAAGRDMHSPELLRPLSVLQTTTQYLVQDVFAVACSSSSGVSSQPRRHRGGNATSLIAQAYMFVEDRLRAVRQDLTVQGLALEGTTGAAEVLQTTANFYILAGYLMSDEARMNVFDRHLHTRELQGVFSSLTEIFFQGAR 2239
G C+ MC E ERRERE L E +FRQ ADP + VK+Y R AAGR++ SP LRP + L T +YL+ +V+ + + + SL AY FV DRLRAVRQDLTVQ ++ GT GA+ VL+ + F + A YL+ D + + LH+ +++ F+ L E + +G R
Sbjct: 8 GLCLDMCSEQERRERERHRRLHPLEIQNGQFERR-NFRQGSHPFADPGRTVKEYSRPAAGRELSSPRDLRPPATLLRTVEYLLMEVW------------EQVNEQDPKSLSL---AYPFVFDRLRAVRQDLTVQRIS--GTEGAS-VLEGSLGFLLCAPYLVRD-LPLEDYCETLHSTQVRESFAELMECYSRGGR 183 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig133.1997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig133.1997.1 >prot_E-siliculosus-1a_F_contig133.1997.1 ID=prot_E-siliculosus-1a_F_contig133.1997.1|Name=mRNA_E-siliculosus-1a_F_contig133.1997.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1034bp MGDNGDTTAARVAPAVPARRGYTISRVEAAPTAASNRALNVAAANGGNGGback to top mRNA from alignment at E-siliculosus-1a_F_contig133:58234..65032+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig133.1997.1 ID=mRNA_E-siliculosus-1a_F_contig133.1997.1|Name=mRNA_E-siliculosus-1a_F_contig133.1997.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6799bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:58234..65032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig133:58234..65032+ >mRNA_E-siliculosus-1a_F_contig133.1997.1 ID=mRNA_E-siliculosus-1a_F_contig133.1997.1|Name=mRNA_E-siliculosus-1a_F_contig133.1997.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6204bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:58234..65032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |