mRNA_E-siliculosus-1a_F_contig133.1993.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig133.1993.1 vs. uniprot
Match: A0A6H5LI96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI96_9PHAE) HSP 1 Score: 241 bits (614), Expect = 6.900e-73 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 2
Query: 419 QASRSFLAKTDAIMFLPGSRRGFHSFLNSGRSKRLMGDAVLFKTARADGEHLGPGSYDLPPTLNNVGRRPRTAPESSLRVKPQQTRPRSRLRRAVSSTNSVNRTGCLKGSVGADAGLYMEEEEERAAAVNAVR 817
QASRSFL KTDAI+FLPGSRRGFHSFLNSGRSKRLMGDAVLFKTARADGEHLGPGSYDLPPTLNN GRRP T PE+SLRVKPQQTRPRSRLRRAVSST+SVN TGCLKGSVGADAGLYMEEEEERAAAVNAVR
Sbjct: 22 QASRSFLTKTDAIIFLPGSRRGFHSFLNSGRSKRLMGDAVLFKTARADGEHLGPGSYDLPPTLNN-GRRPSTGPEASLRVKPQQTRPRSRLRRAVSSTSSVNGTGCLKGSVGADAGLYMEEEEERAAAVNAVR 153 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig133.1993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig133.1993.1 >prot_E-siliculosus-1a_F_contig133.1993.1 ID=prot_E-siliculosus-1a_F_contig133.1993.1|Name=mRNA_E-siliculosus-1a_F_contig133.1993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=240bp MIASRDRPSSSFRSSSDRFRDVASCRKGRCRREENDYRDLGPGKYDGSSMback to top mRNA from alignment at E-siliculosus-1a_F_contig133:20993..26471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig133.1993.1 ID=mRNA_E-siliculosus-1a_F_contig133.1993.1|Name=mRNA_E-siliculosus-1a_F_contig133.1993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5479bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:20993..26471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig133:20993..26471+ >mRNA_E-siliculosus-1a_F_contig133.1993.1 ID=mRNA_E-siliculosus-1a_F_contig133.1993.1|Name=mRNA_E-siliculosus-1a_F_contig133.1993.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1440bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig133:20993..26471+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |