mRNA_E-siliculosus-1a_F_contig1324.1969.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 366 bits (940), Expect = 1.630e-121 Identity = 191/205 (93.17%), Postives = 194/205 (94.63%), Query Frame = 2
Query: 761 MNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSVEWCC--RPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKRRHAFVASLLRHS 1369
MNQHMDIMAILTGAGV DAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCS+EWC PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTS LREKVVDGKPATEEQLHRLQAIRRLLL+VDAVHAVS LWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAK H FVA+LLR S
Sbjct: 1 MNQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.680e-93 Identity = 199/391 (50.90%), Postives = 237/391 (60.61%), Query Frame = 2
Query: 218 VEALLKHGANPSIGAEGGFTALHIG-AQERNATVVKMLTNAGADLEVVAGSDGLTPLHAAVRGGDSEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTLRSSPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVH-AYANSSDGSGMTPLSCSVEWCCR--PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVV-DGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKRRHAFVASLLRHSVK 1375
+ L+K GAN SI + GFTALH A+E + +VK+L AGADL+ + +G PLH A NP+ Q P G T L + A A+ + S P TT VPLD+AA G++DVVREL++E+GIE CDAT+AGA AL AA NQH+DIMAILT AGV+D G L AG+G EASV+FLLR R KE V AY N+ D +G TPL + C PRIVR+LVDAGADTTS V+V NL GGV +NDTPLA T LR+K+V DGKPAT+E L RL+AI RLLL+VDAVHAVS LWPS AP I A E PEP P L L LPILKRR KRR VA+LLR+SVK
Sbjct: 155 AKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTA----LHIAAEEGQVAVMRELLRGN------------ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDT-GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETD--PEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 204 bits (520), Expect = 7.010e-57 Identity = 120/219 (54.79%), Postives = 152/219 (69.41%), Query Frame = 2
Query: 617 SPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSV-HAYANSSDGSGMTPLSCSVEWCCR--PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVD-GKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVER 1261
S G VPLD+AA +G+S VVR LV+E+GI+ C+ NAG QAL LAA + +D +AILTGAG +D G L+ A EAS + LRQR KE + V +A N SG+T L S++ C PRIVRLL++AGADTTS +R TN G V+ N TPLA+TTS+L EK++D G+PATEE L RL+AIRRLLL+ +AVHAVS LWPSDA + HA E+
Sbjct: 164 SSSGFPGVPLDVAASSGHSGVVRHLVQELGIKGCNPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSIQRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEK 378
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.270e-54 Identity = 127/269 (47.21%), Postives = 171/269 (63.57%), Query Frame = 2
Query: 590 ASAISTLRSSPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSVEWCCRPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKV--VDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVERSCGPEPRRPPLS--LTLPIL--KRRAKRRHAFVASLLRHSVKP 1378
A + T P G T +PLD AA G+ +VV EL+ +VGI+ C ++ G +AL AA ++++IM ILT AGV+D G L+ AG G E ++FLL Q R M AY N+ D G+TPL ++ RPR+VRLLV+AGADTTS V V N GG + + TPL +T + +R+KV V PA+ EQLH+L+AIRRLLL+V+AVHAVS LWPSD +I A R R +S +TLP+L +RRA+ R +A+LLR+S KP
Sbjct: 172 ADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQH-YRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTD---RTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D8LDX5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX5_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.710e-54 Identity = 159/294 (54.08%), Postives = 190/294 (64.63%), Query Frame = 2
Query: 326 LTNAGADLEVVAGSDGLTPLHAAVRGGDSEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTLRSSPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQA---LHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSV-HAYANSSDGSGMTPLSCSVEWCCR--PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVV-DGKPATEEQLHRLQAIRRLLL 1186
+ AGADLEV+ S G TPLH G SE V +I A ANPNS R + XXXXXXXXXXXXXXXXXXXXXX ++ +S G T +P+D+A G+SDVVR+LV+ G C NAG+QA L AA QH+ IMAILTGAGV+D +G LLG A EASV+FLLRQR ES SV ++Y N+SD G TPL+ S++ CC RI+RLL DAGAD S VRVTN NG EY+ TPLAV TS +REKV+ +G PATEE L+ L+AI RLLL
Sbjct: 1 MIGAGADLEVMT-SQGSTPLHKDALEGRSEVVGVMIRALANPNS---------------RMLCGAXXXXXXXXXXXXXXXXXXXXXXXXXFLTKKGNSSSGDTAIPMDVAVQNGHSDVVRKLVQWRG---CGVANAGSQACQALFFAASEQHLVIMAILTGAGVVDWVGLSLLGAAESALEASVKFLLRQRYHESTRSVEYSYVNASDTDGWTPLAHSIQRCCSHAARIIRLLFDAGADVASAVRVTNSNGQQEYSGTPLAVVTSCIREKVLANGTPATEEHLYMLEAIGRLLL 275
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D8LSC6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC6_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.790e-48 Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 2
Query: 218 VEALLKHGANPSIGAEGGFTALHIGAQERNATVVKMLTNAGADLEVVAGSDGLTPLHAAVRGGDSEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAV 511
VE L+K GANPSI AEGGFTALHIGAQERNATVVKMLTNAGADLEVVAGSDGLTPLHAAVRGG SEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAV
Sbjct: 12 VEVLIKRGANPSIAAEGGFTALHIGAQERNATVVKMLTNAGADLEVVAGSDGLTPLHAAVRGGGSEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAV 109
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 183 bits (464), Expect = 3.830e-48 Identity = 126/335 (37.61%), Postives = 177/335 (52.84%), Query Frame = 2
Query: 377 TPLHAAVRGGDSEAVRALIEAGANPNSQTPSGVTVGMGFLSLRAVXXXXXXXXXXXXXXXXXXXXXXXXXAASAISTLRSSPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSVEWCCRPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILK--RRAKRRHAFVASLLRHSVK 1375
TPL A G + +V AL++AG+N N++ G T A + T S +PLD+AA G+ +VV EL+ +VGI+ C ++ G AL AA+ +DIMAILT AGV+D G L+ AG G EA ++FLL Q R AY N+ +G G+T L ++ CRPR+V+LLV+AGADTTS V + N G +++ TPL +T L + KP T E+ ++L+ IRRLLL+ +AVHAVS LWPSD P+I HA + G + +L RR + R +A+LLR+S K
Sbjct: 117 TPLDCAAETGCAASVTALLKAGSNINTRRSDGAT----------------PLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDT-GLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR-CRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.040e-44 Identity = 116/261 (44.44%), Postives = 154/261 (59.00%), Query Frame = 2
Query: 632 TVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSVEWC------CRPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDA------PSIVHAVERSCGPEPRRPPLSLTLPILKRRAKRRHAFVASLLRHSVKP 1378
T++PLD AA G V+REL++ VGIE C + G AL +A + + MA+LT AGV+D G L +AGLGREASV++LL+ K AY N D +G TPL S+ C PR+ RLLV+AGADTT+ +R TN G V ++ TPL +T L++K VDG ++++L RL+ IRRLLLQV+AVHA S LWPS + P +A E + P L LPIL+RRA+R +L RH KP
Sbjct: 169 TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDT-GQALTISAGLGREASVKYLLQNHAKH--YGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPD--NAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.840e-43 Identity = 112/267 (41.95%), Postives = 149/267 (55.81%), Query Frame = 2
Query: 590 ASAISTLRSSPYGTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYAN-SSDGSGMTPLSCSVEWC----CRPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKRRHAFVASLLRHSVK 1375
A+ + T S G + VPL++AA G S VV EL+ E GI C + G AL +AA+ +DIM++L AGV+D +G LL G G+EA+V FLLRQ+ + + S Y N + D G+T L S C PRI R LVDAGADTTS V++ N TPL + + PAT+EQL RL+A RR+LL+V AVHAVS +WPSDAP + + L+ LP+L+RRA RR +L R+S K
Sbjct: 142 ANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS---YVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 163 bits (413), Expect = 3.830e-41 Identity = 115/256 (44.92%), Postives = 146/256 (57.03%), Query Frame = 2
Query: 626 GTTVVPLDIAACAGYSDVVRELVEEVGIERCDATNAGAQALHLAAMNQHMDIMAILTGAGVLDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSVEWC-CRPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSFLREKVVDGKPATEEQLHRLQAIRRLLLQVDAVHAVSLLWPSDA-----PSIVHAVERSCGPEPRRPPLSLTLPILKRRAKRRHAFVASLLRHSVK 1375
G T VPLD AA G+ V RELV+ GI C +AG AL AA++QH+D+MA+L AGV+D G L+ T LGRE +++FLL Q+ + + + +A + DG G TPL +V C PR+VRLLVDAGAD T VRV + G TPL T L EKVVD AT +QL L+A RRLLLQV+ VHA S LW A P A S +P L LPI+ RR+ RR A + + R + K
Sbjct: 179 GNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDT-GNALVATVFLGRERALKFLLEQKGEGTARTTYA-STPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPD-GFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKP----LKSRLPIMWRRSARRGAALPGVFRLAKK 427 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1324.1969.1 >prot_E-siliculosus-1a_F_contig1324.1969.1 ID=prot_E-siliculosus-1a_F_contig1324.1969.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1969.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=353bp MLTNAGADLEVVAGSDGLTPLHAAVRGGDSEAVRALIEAGANPNSQTPSGback to top mRNA from alignment at E-siliculosus-1a_F_contig1324:19790..22608- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1324.1969.1 ID=mRNA_E-siliculosus-1a_F_contig1324.1969.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1969.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2819bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1324:19790..22608- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1324:19790..22608- >mRNA_E-siliculosus-1a_F_contig1324.1969.1 ID=mRNA_E-siliculosus-1a_F_contig1324.1969.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1969.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2118bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1324:19790..22608- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |