mRNA_E-siliculosus-1a_F_contig1324.1968.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1324.1968.1
Unique NamemRNA_E-siliculosus-1a_F_contig1324.1968.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 1.960e-182
Identity = 387/439 (88.15%), Postives = 388/439 (88.38%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGGAPXXXXXXXXXXXXXXXXXXXXGTTTEVEEASPQTASPQEPSGTAVTAAGXXXXXXXXPTETGTAAXXXXXXXXXXXXXQAAPTETSSMDVDGAEEGKTAEAPVPAADAGNGEAEQEPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETAEETATEAPAETDEGAGDMEQEEGGGPKLSEAEIKSYK 1551
            MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESA RLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG   XXXXXXXXXXXXXXXXXXXX   TEVE ASPQTAS             XXXXXXXX        XXXXXXXXXXXXX       SSMDVDGAEEGKTAEAPVP ADAGNGEAE+EPPA           XXXXXXXXXXXXXXXXXXXXXXXXXXXX AETAEETATEAPAET EG GDMEQEEGGGPKLSEAEIKSYK
Sbjct:    1 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGXXXXXXXXXXXXXXXXXXXXXXXXXXTEVEMASPQTASXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPVPGADAGNGEAEEEPPATSEAGRGGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAETAEETATEAPAETGEGEGDMEQEEGGGPKLSEAEIKSYK 436
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A6H5L3Q9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q9_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 6.170e-99
Identity = 269/374 (71.93%), Postives = 278/374 (74.33%), Query Frame = 1 
Query:  526 KLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGGAPXXXXXXXXXXXXXXXXXXXXGTTTEVEEASPQTASPQEPSGTAVTAAGXXXXXXXXPTETGTAAXXXXXXXXXXXXXQAAPTETSSMDVDGAEEGKTAEAPVPAADAGNGEAEQEPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETAEETATEAPAETDEGAGDMEQEEGGGPKLSEAEIKSYKVTQLKKALVERGLPTNGLKADLAARLMEAMGY 1647
            +LSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINL+PSLKQLDFQKVTVK            AGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG   XXXXXXXXXXXXXXXXXXXX  TTEVE ASPQTASP +          XXXXXXXX        XXXXXXXXXXXXX       SSMDVDGAEEGKTAEAP  ++  G  +      A         XXXXXXXXXXXXX                             PAET EG GDMEQE+GGGPKLSEA+IKSYKVTQLKKALVERGLPTNGLKADL+ARLMEAMGY
Sbjct:    2 QLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVK------------AGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG-XXXXXXXXXXXXXXXXXXXXXXXXTTEVEMASPQTASPHDXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSMDVDGAEEGKTAEAPEASSAKGGADGRGGGDARVGDEGGEEXXXXXXXXXXXXX-----------------------------PAETGEGEGDMEQEDGGGPKLSEADIKSYKVTQLKKALVERGLPTNGLKADLSARLMEAMGY 330
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.140e-68
Identity = 135/230 (58.70%), Postives = 168/230 (73.04%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 924
            MRLTAD+I+ ARAS+N   ERELDLRG+KIP+IEN+GVTQDQFD +DFSDNEI+KLDNFPR  RL++LLL NN +++I +D+G  LPNLSCL+LTNN +S L+EL  LG C +LTMLSLL N V   Q+YRLY+I+ IPSLK LDF KV  +ER  A RL +S AG+AM +D+A QA   KTF PG  A     LT   R      I +A T EEI+ L + ++AGI P+
Sbjct:    1 MRLTADVILRARASLNALRERELDLRGHKIPIIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQA---KTFVPGGAA--RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPA 225
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A7S3XKJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKJ1_HETAK)

HSP 1 Score: 230 bits (586), Expect = 4.570e-64
Identity = 126/235 (53.62%), Postives = 169/235 (71.91%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQK-LTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYK 936
            MRLTAD+I+ A A+INPC ERELDLRGYKIP+IEN+G TQD FD +DFSDNEIKKL+NFPR +RL++LL  NNH+SKI+E +   +PNLS L     ++  LAEL  L    KLT+LSLL N VV +Q+YRLY+I+  P+LK LDF+KV  +ER+ AARL +S+AGQ M  DV ++    KTF  G     E+K LT++ + +  + I  ATT EE++ L ++++AGI+P+   K
Sbjct:    1 MRLTADVILRADATINPCKERELDLRGYKIPVIENVGATQDMFDTIDFSDNEIKKLENFPRMERLTTLLFNNNHISKIAESIKDQVPNLSTLXXXXXRIQHLAELDSLQGLRKLTLLSLLENPVVRRQHYRLYVIHRCPALKYLDFRKVKQQERQEAARLFKSKAGQQMQDDVQKEI---KTFQAGEKQEREKKRLTEDQKNLIREAIKNATTPEEVDKLERQLKAGIMPNLAQK 232
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A7S2G9L1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9L1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.120e-60
Identity = 124/240 (51.67%), Postives = 163/240 (67.92%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPG----------APAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 924
            +RLTAD+  HA   +N C ERELDLRG KIP IEN+GVTQDQFD +DF+DNEIK++DNFP +KRLS+LLL NNHV+++S  L   LPNL CL         L+E+  L  CTKLTMLS ++N ++ +Q+YRLY+I  +P LK LDF KV   ERE AA+L RS AG+ M QDV  ++   KTFTPG          A    EQK  D+ RA+    IA A+T EE++ + ++++AG+IP+
Sbjct:    2 VRLTADVFAHAVPRMNCCQERELDLRGLKIPAIENVGVTQDQFDVLDFTDNEIKRVDNFPTFKRLSTLLLSNNHVTRLSPTLSEQLPNLDCLXXXXXXXXNLSEVDNLIGCTKLTMLSFVNNPIIRRQHYRLYVIAKLPQLKALDFVKVKAIEREEAAKLFRSAAGRLMQQDVEAES---KTFTPGEDIPSTTNPMANLTAEQK--DQVRAV----IAAASTPEEVDRIERQLKAGVIPT 232
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A3Q3N132_9LABR (Small nuclear ribonucleoprotein polypeptide A' n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3N132_9LABR)

HSP 1 Score: 211 bits (538), Expect = 1.880e-59
Identity = 117/239 (48.95%), Postives = 162/239 (67.78%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 942
            ++LTA++I  A    NP  +RELDLRGYKIP++ENLG T DQFD +DFSDNEI+KLD FP  KRL +LL+ NN + ++ E+L  +LP L+ LILTNN +  L +L  L T   LT+LSLL N V NK++YRLYMIN IP ++ LDFQKV  KER+ A ++ + + G  + +D+A+   + KTFTPG PA  E+K T   +A      + IA A+++ E+E L   +QAG IP  + ++G
Sbjct:    2 VKLTAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTVDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRVGENLEQSLPCLTELILTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYMINKIPQIRVLDFQKVKQKERQEAEKMFKGKRGAQLAKDIAK---RTKTFTPGVPAQLEKKKTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIPGRDLREG 237
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A7S2WMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMG2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.960e-59
Identity = 119/232 (51.29%), Postives = 160/232 (68.97%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGA--PAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 924
            +RLTAD++ +  A INPC +RELD+RG K+P IEN+GVT+DQ+D +DFSDNEIKKL+NFPR+ RLS+LLL NNH+++IS  LG  L +L            L+E+  L  CTKLT LSL++N V  +Q+YRLY+I+ +PS+K LDF KV  +ER  AARL +S AG+ M QDV  +A    TFTPG   P+      T+E  A     IA ATT EE++ + ++++AGIIPS
Sbjct:    2 VRLTADVLQNCFARINPCLDRELDIRGLKVPAIENIGVTKDQYDTLDFSDNEIKKLENFPRFSRLSTLLLNNNHIARISPTLGEQLLSLQXXXXXXXXXXQLSEVDHLVGCTKLTTLSLVNNPVARRQHYRLYVIHKLPSVKVLDFSKVKPQERADAARLFKSAAGKLMQQDVDAEAS---TFTPGEDMPSNPMANFTEEQMAQVRAVIAAATTPEEVDRVERQLKAGIIPS 230
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A3Q1EK11_9TELE (Small nuclear ribonucleoprotein polypeptide A' n=6 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A3Q1EK11_9TELE)

HSP 1 Score: 209 bits (531), Expect = 1.850e-58
Identity = 114/239 (47.70%), Postives = 163/239 (68.20%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 942
            ++L+A++I  A    NP  +RELDLRGYKIP++ENLG T DQFD +DFSDNEI+KLD FP  +RL +LL+ NN + +I E+L  +LP+L+ L+LTNN +  L +L  L T   LT+LSLL N V NK++YRLY+IN IP ++ LDFQKV +KER+ A ++ + + G  + +D+A+   + KTFTPG  A  E+K T   +A      + IA A+++ E+E L   +QAG IP  + +QG
Sbjct:    2 VKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTVDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQSLPSLTELVLTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVAAQPEKKRTGPSQADVDAIKNAIANASSLAEVERLKGMLQAGQIPGRDLRQG 237
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A0K2V8V0_LEPSM (Small nuclear ribonucleoprotein polypeptide A' [Latimeria chalumnae] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2V8V0_LEPSM)

HSP 1 Score: 209 bits (532), Expect = 2.130e-58
Identity = 115/236 (48.73%), Postives = 165/236 (69.92%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRI-------AKATTVEEIEMLSKKIQAGIIP 921
            ++LT D+I  +   INP  +RELDLRGYKIP+IENLG T DQFD +DFSDNEI++LDNFP   RL +L   NN + +I +++  +LPNL+ LILTNN L  LA+L+ L     LT LSL+ N V++K  YRLY+I+ +P+L+ LDF+KV +KERE A    +S+ G+ +++++ ++A  AKTFTPGAP A+E K  ++   +  D+I       A+ATT+EEIE L++ ++ G IP
Sbjct:    2 VKLTPDLIEGSAQYINPVRDRELDLRGYKIPVIENLGATLDQFDCIDFSDNEIRQLDNFPFLPRLKTLFFNNNRIIRIGDNINESLPNLNSLILTNNSLQELADLERLAKIKSLTNLSLMSNPVISKPDYRLYLIHKLPNLRMLDFRKVKLKEREEAKAKFKSEEGKKVLKEIKKRA--AKTFTPGAPLADESKKENQPHGLNPDQIRNIKAAIARATTLEEIERLNQMLRTGQIP 235
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Match: A0A7S2F7F7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7F7_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.540e-58
Identity = 116/234 (49.57%), Postives = 162/234 (69.23%), Query Frame = 1 
Query:  235 MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAARLARSQAGQAMIQDVAQQAE----KAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 924
            MRLT+D++++A A +NPC ERELDLRG KIP IEN+GVTQD +D +DF+DNEIKKL+NFP  KRLS LLL NNHV  I+ ++   +P+L  L+LTNNK++ L+E+  L  C  LT LSLL N V+ +Q+YR Y+I+ +P LK LDF K+  KER+ A RL RS AG+ M +DV +  E    +A+T T         +L +  RA     IA A+T +EI+ + ++++AGI+P+
Sbjct:    1 MRLTSDVLLNAHARLNPCSERELDLRGLKIPAIENIGVTQDLYDTLDFTDNEIKKLENFPNTKRLSCLLLSNNHVKIINPEISEKIPSLRTLVLTNNKITNLSEVDNLAACANLTELSLLSNPVIRRQHYRFYVISKLPQLKVLDFSKIKPKERQEAERLFRSAAGKLMQEDVLKSKEIETDEAETATHNMA-----QLNEVDRAQVRAAIAAASTPQEIDRIERQLKAGILPT 229
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1324.1968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC4_ECTSI1.960e-18288.15U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A6H5L3Q9_9PHAE6.170e-9971.93SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE59_9STRA5.140e-6858.70Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A7S3XKJ1_HETAK4.570e-6453.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G9L1_9STRA1.120e-6051.67Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A3Q3N132_9LABR1.880e-5948.95Small nuclear ribonucleoprotein polypeptide A' n=2... [more]
A0A7S2WMG2_9STRA5.960e-5951.29Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3Q1EK11_9TELE1.850e-5847.70Small nuclear ribonucleoprotein polypeptide A' n=6... [more]
A0A0K2V8V0_LEPSM2.130e-5848.73Small nuclear ribonucleoprotein polypeptide A' [La... [more]
A0A7S2F7F7_9STRA2.540e-5849.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1324contigE-siliculosus-1a_F_contig1324:11065..18839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1416
Model size2474
Exons7
Ec32 orthologEc-21_003190.1
Ec32 ortholog descriptionU2 small nuclear ribonucleoprotein A
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGsCOG4886@1,KOG1644@2759
EggNOG free text desc.U2 snRNA binding
KEGG ModuleM00352
KEGG Pathwayko03040,map03040
KEGG koko:K11092
Seed eggNOG ortholog2880.D8LSC4
Seed ortholog evalue5.2e-153
Seed ortholog score547.7
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927845.6863132-UTR-E-siliculosus-1a_F_contig1324:11064..112981622927845.6863132-UTR-E-siliculosus-1a_F_contig1324:11064..11298Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1324 11065..11298 +
1696318705.1759667-UTR-E-siliculosus-1a_F_contig1324:11064..112981696318705.1759667-UTR-E-siliculosus-1a_F_contig1324:11064..11298Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1324 11065..11298 +
1622927845.8343372-UTR-E-siliculosus-1a_F_contig1324:18015..188391622927845.8343372-UTR-E-siliculosus-1a_F_contig1324:18015..18839Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1324 18016..18839 +
1696318705.2500165-UTR-E-siliculosus-1a_F_contig1324:18015..188391696318705.2500165-UTR-E-siliculosus-1a_F_contig1324:18015..18839Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1324 18016..18839 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927845.7030656-CDS-E-siliculosus-1a_F_contig1324:11298..113251622927845.7030656-CDS-E-siliculosus-1a_F_contig1324:11298..11325Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 11299..11325 +
1696318705.1879234-CDS-E-siliculosus-1a_F_contig1324:11298..113251696318705.1879234-CDS-E-siliculosus-1a_F_contig1324:11298..11325Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 11299..11325 +
1622927845.7148898-CDS-E-siliculosus-1a_F_contig1324:13047..131311622927845.7148898-CDS-E-siliculosus-1a_F_contig1324:13047..13131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 13048..13131 +
1696318705.1972349-CDS-E-siliculosus-1a_F_contig1324:13047..131311696318705.1972349-CDS-E-siliculosus-1a_F_contig1324:13047..13131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 13048..13131 +
1622927845.7259285-CDS-E-siliculosus-1a_F_contig1324:13876..140591622927845.7259285-CDS-E-siliculosus-1a_F_contig1324:13876..14059Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 13877..14059 +
1696318705.2062337-CDS-E-siliculosus-1a_F_contig1324:13876..140591696318705.2062337-CDS-E-siliculosus-1a_F_contig1324:13876..14059Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 13877..14059 +
1622927845.7369757-CDS-E-siliculosus-1a_F_contig1324:14631..147931622927845.7369757-CDS-E-siliculosus-1a_F_contig1324:14631..14793Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 14632..14793 +
1696318705.2153437-CDS-E-siliculosus-1a_F_contig1324:14631..147931696318705.2153437-CDS-E-siliculosus-1a_F_contig1324:14631..14793Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 14632..14793 +
1622927845.7508845-CDS-E-siliculosus-1a_F_contig1324:15492..156811622927845.7508845-CDS-E-siliculosus-1a_F_contig1324:15492..15681Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 15493..15681 +
1696318705.2251272-CDS-E-siliculosus-1a_F_contig1324:15492..156811696318705.2251272-CDS-E-siliculosus-1a_F_contig1324:15492..15681Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 15493..15681 +
1622927845.8021648-CDS-E-siliculosus-1a_F_contig1324:16230..169021622927845.8021648-CDS-E-siliculosus-1a_F_contig1324:16230..16902Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 16231..16902 +
1696318705.2349954-CDS-E-siliculosus-1a_F_contig1324:16230..169021696318705.2349954-CDS-E-siliculosus-1a_F_contig1324:16230..16902Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 16231..16902 +
1622927845.817878-CDS-E-siliculosus-1a_F_contig1324:17916..180151622927845.817878-CDS-E-siliculosus-1a_F_contig1324:17916..18015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 17917..18015 +
1696318705.2424843-CDS-E-siliculosus-1a_F_contig1324:17916..180151696318705.2424843-CDS-E-siliculosus-1a_F_contig1324:17916..18015Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1324 17917..18015 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1324.1968.1prot_E-siliculosus-1a_F_contig1324.1968.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1324 11299..18015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1324.1968.1

>prot_E-siliculosus-1a_F_contig1324.1968.1 ID=prot_E-siliculosus-1a_F_contig1324.1968.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1968.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=472bp
MRLTADIIMHARASINPCDERELDLRGYKIPMIENLGVTQDQFDAMDFSD
NEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLS
TLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVT
VKERESAARLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHR
AIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGGGAPAANGAAAPAA
AAAAPGKPPAGTTTEVEEASPQTASPQEPSGTAVTAAGKAAAPAAAPTET
GTAATAPEAPAAPAAPAQAAPTETSSMDVDGAEEGKTAEAPVPAADAGNG
EAEQEPPATSEAGGGGGGKEEASSAKRGADGGGGGDAMVDDEGGEEAAAE
TAEETATEAPAETDEGAGDMEQEEGGGPKLSEAEIKSYKVTQLKKALVER
GLPTNGLKADLAARLMEAMGY*
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mRNA from alignment at E-siliculosus-1a_F_contig1324:11065..18839+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1324.1968.1 ID=mRNA_E-siliculosus-1a_F_contig1324.1968.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1968.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7775bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1324:11065..18839+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGCGACCAACACTGGATGCACTAACCCCGACAAGCGCCATTAGAGGGAA
AGCTGCTGTGGGATACCTCGCGCCAACGATCGTTTCTCGCTGGCGACGCG
AATCCGAGAAAATCTAGAGGTTTCTCGATTTGGTGGGCGGGAAACCAGGG
GGGGGGAGCTCTGGCTGTGGGCGGTGCAGACGATAGGCGTTAGCTGGAGA
TTGGCGGCGAGGGGGAAGAGGCAAAGGAGGAAAGATGCGGCTCACCGCTG
ACATAATCATGGTGAGTAAGAGCGTAGGTAATGAAGCGCGAGGCTGGTGT
ATCTGTAAGCCGAAACGACGTCGGGGGGAGAGTAGGACCAAACGTAATGC
AAACACAGCCAAGTCAATTTTTCAAGCGGTGTTGGCACCGCTGTTGTCAT
CGCTGTTGTTGGTGGATCCACACGGGCACTGGGTGTCGGGGTGTCCTCCT
CGCCCCTTGATCTTTTGATACCCATGGCCTGCAGCTTGCCTCCCTGTTGG
TGGACATGGTCCCTGCATCCACCTGCGTTTATGATGCCAAAGTCCGTCAC
AGCAGTACGAAGAAGAAGAGTCAAGCTTCCTGAGAAAACTCGACGACGCC
ATATGGCCATGTCTCACGATGAGTTTTAGACTACCCCACATGGGGGGCGG
TGTCTACTGCTGTGAGTGGGTAGGTCATGGTCTTGGAGCACACGGCTACC
ATCTGTTGGATAGCAGCGAGTTATGCTCTGCTCAAAGGCTGGCTGCGACA
GGTAGAGATGGTTGGCGGCGATCTTGCTTTGCTCTATGGACGAGGCCTAC
ACAGCAGCACAGCGATCAGTCTCGTGCTGCAATTGTACGAGAGCGACTTT
TCCATCCGAATGTATGTCTTGAGGGCACCCTGCCATTGCGGCGTCCCGCT
GCACCATGCAAACAGGAATATCCATGCTGGTGCAGTTGAGATGTCTGAGG
TAGGGCTTCCGGACCCCAGCAGAAAAAGATATGGACTTTTTTCGTCGTGA
TGATCCGCGTATCGCCATCGATGGTTGTATCGGGGTGTTCAGCCGACCTA
CACCTCTCTTCGGTTCTCTCGGTTCTCGAAAGACAAGTTCCGTCACGCAG
CGTCGCCCTAACGAAACGGTACCATTCACTGCTGTACCAGGTTGTACAAA
CACCAGTTTCACGATATCGATTAAGGCCGTACAAACTTTGTTGGGGCTGT
CGGCGGGGGTCTTGCGGACTGAACTGCTGGTGTGCTTTGTTTACTTCCCA
TGCGTGGTGCGGACACAACAGCTTTGATCATTAAGCTTTTCGCTGCGGTG
TGTTCATGTACGAGGACTGTGGCACCACATGCCTGTCGGGTAGGTCCATC
GTAGATGGTGTTGCGAACAAAGCACCTGGCACCGGTCATACCTGCAAGTA
TTCCGCAAAAACCGTCAAAGTTTTTTCTCGCCGTGCTGCTGTACCTGGCA
CCCGTCGGGGTTTCCGTTCCTGGCCATCTGCTGCTAAACGGACGGTGGGT
TGTCGCGCCGTGTGGCGTGATGCGTCCATGGGGGTATGGTAGCAGATACT
TGTTGATCAGGAGCGGAATATCAAGCAATATCGGGAGTAGCGCCAGTCGG
AGCTGACTGATGACGAACTCTACTGGCATCAGCACGGAAGAACCGTTTAG
ACGAAACGGTCGGTGGTAGAGACAACAGAGAGGGTTGGCCAGTTTCGTTT
TTTGTTTCCCGCGCGTACAGACAGAAGACACGGGCATCAACCAGAATGAA
GCTGTGCACATGCATACCACCTTCAAATAACTGTATTCCGCCAATAGATG
GAATCATCAACAAAGCCGGCCAACGCCCCCAGACCAACATGATAGAGTCC
CCTCCACGTTTCATGTTTTCGCGTACCCTCCTCCGCCCGTCAACGCAATG
CACCTGCTGTTACGAGGTCTGTGCTTATTGATTTCGGTGTCCTTCCCCTA
TTGCGTGTCGTGCATTGCCCGCGCTCGTTCCAGCACGCTCGTGCGAGCAT
CAACCCTTGCGACGAGCGAGAGCTGGACCTTCGCGGGTACAAGATCCCGA
TGATAGAGAACTTGGGGGTGAGAGACGAAACACGACCACGGAGTGGAACG
AGTAGCAGGGGGGCGGGTGTGTCTGTACTCATAGTCGTGCCTGCCGTAGT
CGTTAGACAATTGAATTCGCATCCCAACAAAGCAGGGACGGAGCATCCCG
GGTTCTCCCCGGACCAGGCTGTCGGGGGGGGGGGTACTCGTGTAACCGGT
ATGCCGTAGTCGTTACAGCATTTACCTCGCATCCCTACAATGCCGGGACG
GAGCGATATGCCGGGTGCTCGCTGGCCCGGGCTACGTTTTACAAGGATAA
GGATGAACCAGAACCTGGTCTTTATCCTTGCGTTTGCTGTGCCATCCAGA
TATGCCATGGGTTGATGGAGGTATCCCGGCTAACCTAACGTTTCACCATC
GGCAGTAGCAGGGGGGGGGGTTTGGGGAAAAAGCCGGGGAGACAGGGAGA
AGGAGGTGTATGTGCCGGGGGAGTGAAGGAAAGGCGAGGGGGGCTGCGGC
AGGGCGACAAGGCACACGCTTTGTATTTGTCGACGTCATATTGTTGTTGT
CGTTGTCCTTTGTCGTCGTGGTTTTACCTCTGCCGCTGATGCTGGTGCCG
GATGCGGCGATTTCGTCGTGGCCGCTTCCGGTTTTTTTAAGCGGGCTCTC
GCATTTTTCTCCGCTGCGAGCGAATAAACGCCCTTTGCTGCCGTCACTCT
CCCGGGTGCGTGCGTGCGTACGTACGTACGTGTGCTTTTGTTTATCTCCA
CCTGTGAACCAGGTGACCCAAGATCAGTTCGACGCGATGGACTTCTCGGA
CAACGAGATCAAGAAGCTAGACAACTTCCCCCGGTACAAGCGCCTGTCGT
CCCTCCTCCTCTGCAACAACCACGTCTCCAAGATTTCGGAAGACCTCGGC
ACTGCTTTGCCGAACCTCTCCTGCCTGATACTCACCAACAACAAGGTGAG
CAGTAGACATGGCGAGGGGGGCGTAGAGAGGACCGGGCCAAAGGTTCTTC
GGTGCCGTCCTTGTCGCAGATTGCCAATCCGGGGGGCTTCATCGTGGAAC
GGAGAGGGGAGAAGAACGGGGCGAGCGACGGACAGAAACGAGATACACGA
AGAATAGCTCTGCATGCGCACAGCGGTGTACTTTTTCTATTCTCAAGCCA
GGAGGGAAGCCGTACTCCTCCTCCGTTCGTGTCTGTTCCGATTGTTTCGA
AGTGGCTTCTTGTGGTTCGATGGTTCGACGATTCCTGGTGCTTCTTGCGG
TAGATGGAAGTGGTGGTGTCGGTGGAACGCTACTACTGTAGGATGAGAGG
TGTGGCGTTTCTGCCTGCTGGTGCTGTTTAGTTGAGTAGCCACGTTGTCG
GCCGCTTCTCGGGGTTCGATAACACTAACAAACGAAAGTTCGGAGCTATC
GTGCCGCGACTGGGGGGCGCTTGCAGAAATGACGACGAGATCACCAATTG
ACAGCTGCTAACATACACACAACGTCCCCGCGTCCACCCCCCCCCCCCCC
CTCCCGCCTACATGCAGCTCTCCACGCTAGCGGAACTCAAGGGCCTTGGC
ACGTGCACGAAGCTGACGATGCTCTCCTTGCTGCACAACGAGGTGGTAAA
CAAGCAGTACTACCGACTGTACATGATCAACCTCATACCCAGCCTCAAGC
AGCTGGATTTCCAGAAGGTCACGGTGAAGGTGAGGATGGTTTGGGTTTTG
CCTCGAGCGGGGAGAGAAAAAGGGAGAGAAGGAAGTTACACGAAGAAGTT
GTAGGCGCAGTTGTGCCGAAGTTTTTTCGCCTGGTCGTCGTGATTTCTCA
AGGGCCCCATTTCAAGCTGTGGTTGCGTGTGTGCGCGGTTTTTCCGTGCA
CCGGACCCCGGGCGCTGTAAATATGGCCATGGTCGCTGTCGTTGGACCTG
TTGTAATCTTGGTATTGTCTTGGTGCTTCAACCCCCTGCGCTTTTGTGTC
GCGTAGTTGGGACCGAACTCCTTCGCGTCGCGTCTTGTTGGTGCTCTTGA
ATTGGTGTATATTCACGCTTTGGCACGTGCGCGCGAGCTGTTCAACGGTC
CGTTTGCCATCGACGAACAACCTTACGAAAAATAGCTCTTGAACGTGGAA
GTCGTTGTGCCTGGTGTCCCGAGAGGCTGCATGGTCACATGACTTACTCC
CAAGCACCAAACAAGTGCCCCCCCCCCCCCCCCCCCACTCTCCTCCACCC
AAAGCGAGAGAAGGGGGCGCGCAGGGGGGGGGGACCGGCGCGGGGGGGGG
GGGGACAGGAGNNNNNNNNNNGAACTTGTCGTTTTGCCTGGTGTCCCGAG
AGGCTGCATGGTCACATGACTTCCCCCCAAGCACCAAACAAGCCCCCCCC
CCCCCCCCGTTACATTTCTCATCGCCAGGAGCGAGAGTCGGCGGCCCGAT
TGGCCAGGTCACAGGCAGGGCAGGCGATGATACAGGACGTGGCGCAGCAG
GCGGAGAAGGCTAAGACCTTCACGCCGGGCGCCCCCGCGGCGGAAGAGCA
GAAGCTGACAGACGAGCACCGAGCCATCTACGCCGATCGCATCGCGAAGG
CCACCACAGTAGAGGAGGTGCGTTCTCTCCGGTTGGAGGGGGGGGGGTCA
TCGCGTGGGCGTGACGGCCGACGCGTTTTTTTTCTCGCGCTCTGAGTGGT
ACAGGAGAGCAGGGTTTACTTGTTTGACCGCAGTACAAGCGTAGGAGGTT
TTGAATCGACGATTGTCCCCGCGTCCTCCTTCGAAACAGCGCCTCTTGCT
CTTCCATGTATGCGTACAAGGTGAATGCACCGCCTCCTGTGGGCGGGTAG
CCCTTTCCACCTATTTAATGCTCTGCCCTCCGGGTTAGGGCTTGCAATGG
GCATGTCCCCGTGACATATCTTGCGAGAACATTGCGAGGAGGTTCTCCCG
GCTTCCGAGTACACGGCAGAAGAGCGCGACGGGTTGTTGTGTCATTAGCC
CGGCAACGTCGAGTCGGCATCCCTGTTTCCACTGCCGTCGAGCCACAGTG
TCGAGCCACAGTCTTTCTATCTCTCTCTGGTCCTTTCTCTCTTGATCCCC
CCTCTATCTATGCTCATGTTTCTTGTCCATCCTCCTCGGTCCCGTGTGTA
TCTATTCGTCTCGTAGATCGAAATGCTCTCCAAGAAGATCCAAGCTGGCA
TCATCCCGTCAGCGAACTACAAGCAGGGCGGCGGAGCGCCGGCGGCGAAC
GGGGCTGCTGCGCCAGCCGCCGCGGCGGCGGCTCCGGGGAAGCCTCCAGC
CGGCACAACAACCGAGGTCGAAGAGGCTTCGCCACAAACGGCGTCTCCTC
AGGAGCCGTCGGGCACGGCAGTAACGGCAGCAGGGAAGGCTGCTGCTCCC
GCCGCCGCCCCCACGGAGACGGGAACAGCGGCGACGGCGCCAGAAGCACC
AGCAGCACCAGCAGCACCAGCACAAGCTGCGCCCACGGAAACATCAAGCA
TGGACGTCGACGGTGCAGAGGAGGGGAAAACGGCGGAGGCGCCGGTTCCG
GCCGCCGACGCTGGGAACGGCGAAGCCGAACAAGAACCGCCAGCAACATC
AGAAGCGGGGGGGGGGGGGGGGGGGAAGGAGGAGGCAAGTAGCGCCAAGA
GGGGGGCAGACGGCGGCGGTGGTGGTGATGCTATGGTTGATGATGAGGGG
GGAGAAGAAGCGGCCGCAGAAACAGCGGAGGAGACGGCCACGGAGGCACC
GGCGGAAACGGACGAGGGGGCGGGAGACATGGAGCAGGAGGAGGGAGGAG
GGCCCAAGCTTTCCGAAGCTGAAATCAAGTCGTACAAGGTGGGCACACGA
GTGTACAGCAGTCTATCTGCCGACATGTCTGCGAAAACACCCAAACGTAG
TTCAGTAGCAAAGACCCACCTATGACCTGCATCCAAACCCGAAAGGAGGG
AAATTATGCGCACGTAGCAGGCCACTGGCGATGCCGATGCCCTCTGTGCA
AGAAAGAGTCCACCCTGGACCAAAAATGAAGACCACCAAGACATTAACCG
TCGTGTCTTCCGAAGCTTAAGAATATGATGCCCTCCACAAACCGAGAGGA
CTGGCAGATCGATTGGTCAGGGGGCCAATGCATGCCCATGTCGCGTGTGT
TAGGACGCCGCCCTGTTGATGTGTCTTGCTTCTTGCTAGCCTCGGGTATA
TCTGGTGCAAGAGACATTGACTTCCGCGTTGCAGAAGATGTGTTTGGTGC
TTTGATGCTGTCGGTGGCCGCATTCTGCACCTGATGCCTGTTAGAACAAT
ACACATCCTGTATGTTCTGTGAATGGGACGGAGAAGCGCGTGGGGCTGAA
CTTCTGCTTAGATCACGGGGTGTTTGTCGTGCGTGCGATTGATCGTTGTG
TTGACGATTAACGATGACTCTTGTACATGTACCCGTTTCCGTGTTTGGTG
TGCATTGGAGCATGCGTCAAGGAGTTGGAAGGGGTCCTGACAATCTCTCG
TTTATTTTTGAAACAATATATACGTACCTCGACATTTGGACAAGGAAACC
TTGATCGTCTCGTTTTTCGTCCCGTTTTGGGCGGAACGTTCCGCTCGCGC
CAGGAATGGCCGCAACAAGTTAACATATCTCCACCGGTTATGTTCTCATC
GTGCTAAATAGTTGAAGCAAATGCCCTACCACTGCGGTATACCCCATCAT
CAGACGAGCCCTGTACATATTCAAACAAGCGTTCAGAGCACGAATGGGCA
TGCGTTCATCCATCGCCTATTCCTTGGTAGAGGCACACGGGCTCCTCGTT
TCTCCTCACCCGTAACCGCTGTGAATACACGACCCGTCCCACCGGAGGGC
AGGTGACGCAGCTGAAGAAGGCGCTGGTGGAACGCGGCCTTCCCACAAAT
GGACTCAAGGCCGACCTCGCCGCGAGGCTGATGGAGGCGATGGGGTACTG
ATGGCGGGCAAGGGAAGATTTCGGCCGGATGCCGGGGGTGGGGGGGCATG
TCTGTAGCGTTTGTTGCCTCTGGTCGCTTGCGGACCGTCGACGGGGTTCC
CCTACTTGGGCGACGAGAATTGAGGAGGGGAAGACGATGCGCCCGAAAGT
ATTTTCAGATTTTGTGGCAACTGCGTTGTGATGCTGGTTGGTGGCGTACG
GAGGTGTTTCGAATAGAACTTAGTCCTGGGTAAGTTAGCCCAGAGGGGGA
TGCTAACAACGCTGCGATTGCGTTTTGGCATGATCAGTGGCCCAGAACAA
TAGGTCAGAAATTGGTGTGGTGCCCGTCCGTCTCCCTTGCACCGCGCAGG
TCCGTGATGGTTTACTGAGCGACTTTTTCGCATTCTCTCCTCTCGTCGTT
TTCGATTGAATACCGTCGTGGTCTTCGGCGATCTCACTTCTCCGGCCAGC
CTCACCACGTCGTGTGTGTGATGGTGCCTCCTTGCCAGCCTCTTCTTTTC
GCCCGTGCGTCTTCAAAATCTGTGACTGTTTCACTTTTTCGACGGGGGAT
CGATGTCGACGTGAACCAAAATGACGAGCACGTCCGAGGAGAAAGAAGAG
GATTTGACGACTGCTTTGCCCCGACCCTAGCACTTGCGAATGCCGTACTC
CGTATTTACTTGTTGTACCGATATGCGTTTTGCGGATACAAGCGATTCAA
AGTTCCTAGAAGTGCGAATTTCGGTTGCATGGAACGCTGAAGAGGGCTAT
AATCTTGACTGGAAGGGTGAGAGAAATTCACGGCTTAGCTAGCTAGACCA
ATTCTGCATCGCAACTGTTGTCGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1324:11065..18839+

>mRNA_E-siliculosus-1a_F_contig1324.1968.1 ID=mRNA_E-siliculosus-1a_F_contig1324.1968.1|Name=mRNA_E-siliculosus-1a_F_contig1324.1968.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2832bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1324:11065..18839+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGGCTCACCGCTGACATAATCATGATGCGGCTCACCGCTGACATAAT
CATGCACGCTCGTGCGAGCATCAACCCTTGCGACGAGCGAGAGCTGGACC
TTCGCGGGTACAAGATCCCGATGATAGAGAACTTGGGGCACGCTCGTGCG
AGCATCAACCCTTGCGACGAGCGAGAGCTGGACCTTCGCGGGTACAAGAT
CCCGATGATAGAGAACTTGGGGGTGACCCAAGATCAGTTCGACGCGATGG
ACTTCTCGGACAACGAGATCAAGAAGCTAGACAACTTCCCCCGGTACAAG
CGCCTGTCGTCCCTCCTCCTCTGCAACAACCACGTCTCCAAGATTTCGGA
AGACCTCGGCACTGCTTTGCCGAACCTCTCCTGCCTGATACTCACCAACA
ACAAGGTGACCCAAGATCAGTTCGACGCGATGGACTTCTCGGACAACGAG
ATCAAGAAGCTAGACAACTTCCCCCGGTACAAGCGCCTGTCGTCCCTCCT
CCTCTGCAACAACCACGTCTCCAAGATTTCGGAAGACCTCGGCACTGCTT
TGCCGAACCTCTCCTGCCTGATACTCACCAACAACAAGCTCTCCACGCTA
GCGGAACTCAAGGGCCTTGGCACGTGCACGAAGCTGACGATGCTCTCCTT
GCTGCACAACGAGGTGGTAAACAAGCAGTACTACCGACTGTACATGATCA
ACCTCATACCCAGCCTCAAGCAGCTGGATTTCCAGAAGGTCACGGTGAAG
CTCTCCACGCTAGCGGAACTCAAGGGCCTTGGCACGTGCACGAAGCTGAC
GATGCTCTCCTTGCTGCACAACGAGGTGGTAAACAAGCAGTACTACCGAC
TGTACATGATCAACCTCATACCCAGCCTCAAGCAGCTGGATTTCCAGAAG
GTCACGGTGAAGGAGCGAGAGTCGGCGGCCCGATTGGCCAGGTCACAGGC
AGGGCAGGCGATGATACAGGACGTGGCGCAGCAGGCGGAGAAGGCTAAGA
CCTTCACGCCGGGCGCCCCCGCGGCGGAAGAGCAGAAGCTGACAGACGAG
CACCGAGCCATCTACGCCGATCGCATCGCGAAGGCCACCACAGTAGAGGA
GGAGCGAGAGTCGGCGGCCCGATTGGCCAGGTCACAGGCAGGGCAGGCGA
TGATACAGGACGTGGCGCAGCAGGCGGAGAAGGCTAAGACCTTCACGCCG
GGCGCCCCCGCGGCGGAAGAGCAGAAGCTGACAGACGAGCACCGAGCCAT
CTACGCCGATCGCATCGCGAAGGCCACCACAGTAGAGGAGATCGAAATGC
TCTCCAAGAAGATCCAAGCTGGCATCATCCCGTCAGCGAACTACAAGCAG
GGCGGCGGAGCGCCGGCGGCGAACGGGGCTGCTGCGCCAGCCGCCGCGGC
GGCGGCTCCGGGGAAGCCTCCAGCCGGCACAACAACCGAGGTCGAAGAGG
CTTCGCCACAAACGGCGTCTCCTCAGGAGCCGTCGGGCACGGCAGTAACG
GCAGCAGGGAAGGCTGCTGCTCCCGCCGCCGCCCCCACGGAGACGGGAAC
AGCGGCGACGGCGCCAGAAGCACCAGCAGCACCAGCAGCACCAGCACAAG
CTGCGCCCACGGAAACATCAAGCATGGACGTCGACGGTGCAGAGGAGGGG
AAAACGGCGGAGGCGCCGGTTCCGGCCGCCGACGCTGGGAACGGCGAAGC
CGAACAAGAACCGCCAGCAACATCAGAAGCGGGGGGGGGGGGGGGGGGGA
AGGAGGAGGCAAGTAGCGCCAAGAGGGGGGCAGACGGCGGCGGTGGTGGT
GATGCTATGGTTGATGATGAGGGGGGAGAAGAAGCGGCCGCAGAAACAGC
GGAGGAGACGGCCACGGAGGCACCGGCGGAAACGGACGAGGGGGCGGGAG
ACATGGAGCAGGAGGAGGGAGGAGGGCCCAAGCTTTCCGAAGCTGAAATC
AAGTCGTACAAGATCGAAATGCTCTCCAAGAAGATCCAAGCTGGCATCAT
CCCGTCAGCGAACTACAAGCAGGGCGGCGGAGCGCCGGCGGCGAACGGGG
CTGCTGCGCCAGCCGCCGCGGCGGCGGCTCCGGGGAAGCCTCCAGCCGGC
ACAACAACCGAGGTCGAAGAGGCTTCGCCACAAACGGCGTCTCCTCAGGA
GCCGTCGGGCACGGCAGTAACGGCAGCAGGGAAGGCTGCTGCTCCCGCCG
CCGCCCCCACGGAGACGGGAACAGCGGCGACGGCGCCAGAAGCACCAGCA
GCACCAGCAGCACCAGCACAAGCTGCGCCCACGGAAACATCAAGCATGGA
CGTCGACGGTGCAGAGGAGGGGAAAACGGCGGAGGCGCCGGTTCCGGCCG
CCGACGCTGGGAACGGCGAAGCCGAACAAGAACCGCCAGCAACATCAGAA
GCGGGGGGGGGGGGGGGGGGGAAGGAGGAGGCAAGTAGCGCCAAGAGGGG
GGCAGACGGCGGCGGTGGTGGTGATGCTATGGTTGATGATGAGGGGGGAG
AAGAAGCGGCCGCAGAAACAGCGGAGGAGACGGCCACGGAGGCACCGGCG
GAAACGGACGAGGGGGCGGGAGACATGGAGCAGGAGGAGGGAGGAGGGCC
CAAGCTTTCCGAAGCTGAAATCAAGTCGTACAAGGTGACGCAGCTGAAGA
AGGCGCTGGTGGAACGCGGCCTTCCCACAAATGGACTCAAGGCCGACCTC
GCCGCGAGGCTGATGGAGGCGATGGGGTACTGAGTGACGCAGCTGAAGAA
GGCGCTGGTGGAACGCGGCCTTCCCACAAATGGACTCAAGGCCGACCTCG
CCGCGAGGCTGATGGAGGCGATGGGGTACTGA
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