mRNA_E-siliculosus-1a_F_contig1323.1966.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A6H5L3B6_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B6_9PHAE) HSP 1 Score: 533 bits (1372), Expect = 1.350e-174 Identity = 480/548 (87.59%), Postives = 485/548 (88.50%), Query Frame = 2
Query: 8 ECTVREARGREDRDLTLLDMAPAAPTRCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLPSRGSSSKHXXXXXXXXXXXXXXXXXXDSDDGRANGVGSGMKKMQSRGAARDTPDKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEEGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-----HRAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKRAAATGRHGRSRSRSRGSKSPAARQDKSASNAQDAPDDGRTRYKGRGGRVYRTPSPVRGGRADRDRDDRYNNRSRDGGGXXXXXXYGDRGGARSRSR 1636
EC VREARGR D TLLDMAPAAPTRCFFD++IGGEPAGRMVFKLYT+ VPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFF+TT PASHLDGLHVVFGELESGADTL KMSEVETDKKDAPISLQRVIIEDCGELLPSR S XXXXXXXXXXXXXXXXXX ANGVGS XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HRAVGNGVSAASKENGSRSSKPANGSSSRH APEGRRA SPSPPKRAAATGRHGRSRSRSRGSKSPAARQDKS SNAQDAPDDGRTRYKGRGGRVYRTPSPVRGG+ADRDRDD YNNR RDGGG XXXXXYGDR GA R R
Sbjct: 8 ECRVREARGRTDS--TLLDMAPAAPTRCFFDISIGGEPAGRMVFKLYTETVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFITTHPASHLDGLHVVFGELESGADTLVKMSEVETDKKDAPISLQRVIIEDCGELLPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRAVGNGVSAASKENGSRSSKPANGSSSRHTAPEGRRAASPSPPKRAAATGRHGRSRSRSRGSKSPAARQDKSTSNAQDAPDDGRTRYKGRGGRVYRTPSPVRGGKADRDRDDGYNNRPRDGGGRXXXXXYGDRSGAWDRDR 553
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: D7FWA1_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA1_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 8.730e-160 Identity = 426/438 (97.26%), Postives = 430/438 (98.17%), Query Frame = 2
Query: 65 MAPAAPTRCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLPSRGSSSKHXXXXXXXXXXXXXXXXXXDSDDGRANGVGSGMKKMQSRGAARDTPDKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEEGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHRAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKRAAATGRHGRS 1378
MAPAAPTRCFFDMAIGGEPAGRMVF+LYT+KVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFF+TTDPASHLDGLHVVFGELESGADTL KMSEVETDKKDAPISLQRV+IEDCGELLPSRGSSSKHXXXXXXXXXXXXXXXXXXDSDDGRANGVGSGMKKMQSRGAARDTPDKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEEGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKRAAATGRHGRS
Sbjct: 1 MAPAAPTRCFFDMAIGGEPAGRMVFELYTEKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFITTDPASHLDGLHVVFGELESGADTLTKMSEVETDKKDAPISLQRVVIEDCGELLPSRGSSSKHXXXXXXXXXXXXXXXXXXDSDDGRANGVGSGMKKMQSRGAARDTPDKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEEGEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RAVGNGVSAASKENGSRSSKPANGSSSRHAAPEGRRAVSPSPPKRAAATGRHGRS 431
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A6V1RCR2_HETAK (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCR2_HETAK) HSP 1 Score: 234 bits (598), Expect = 6.620e-67 Identity = 115/173 (66.47%), Postives = 134/173 (77.46%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 604
+ FFD+ IGG AGR+VF+LY D VP TAENFR LCTGEKG G TT + LHYKGVPFHR+I GFM QGGDF NGTGGESIYGGKFKDE +KH + LLSMANAGK+SNG+QFFVT P HLDG HVVFGE+ +G D + +M EVE D+K+ P++ QRV+I DCGEL
Sbjct: 15 KTFFDITIGGVKAGRIVFELYNDLVPKTAENFRALCTGEKGIGPTTRKPLHYKGVPFHRIIGGFMAQGGDFSNNNGTGGESIYGGKFKDEA--FTVKHGRPGLLSMANAGKDSNGAQFFVTFVPTPHLDGKHVVFGEVVAGMDIVRRMEEVECDRKNCPVAAQRVLIADCGEL 185
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A8K1CG83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG83_PYTOL) HSP 1 Score: 234 bits (597), Expect = 4.370e-66 Identity = 115/177 (64.97%), Postives = 136/177 (76.84%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLPSR 616
R FFD++IGG AGR+VF+LY D VPLT +NFR LCTGE G G+TTG+ LHYKGVPFHR+I GFM QGGDF R+GTGGESIYG +FKDE + +H K LLSMANAG N+NGSQFF+TT P HLDG HVVFGE+E G D + KM VET KD P+++Q V IEDCGE+ S+
Sbjct: 6 RVFFDISIGGASAGRIVFRLY-DGVPLTTDNFRALCTGEAGVGKTTGKPLHYKGVPFHRIIKGFMLQGGDFSNRDGTGGESIYGSRFKDES--FRYRHTKPGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVEKGMDVVRKMESVETGVKDRPVAMQTVRIEDCGEVKKSK 179
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: G4ZG38_PHYSP (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZG38_PHYSP) HSP 1 Score: 225 bits (574), Expect = 9.040e-65 Identity = 111/173 (64.16%), Postives = 133/173 (76.88%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 604
R +FD++IGG AGR+VF+LY +P T ENFR LCTGE+G GR+TG+ LHYK VPFHRVI GFM QGGDF RRNGTGGESIYG KF DE + +H+K LLSMANAG+N+NGSQFF+TT P HLDG HVVFGE+ESG D + ++ VET D P +Q V+IEDCGE+
Sbjct: 3 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRVIKGFMLQGGDFSRRNGTGGESIYGDKFADES--FRYRHSKAGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGEVESGMDVVRRVENVETVANDKPAPMQAVVIEDCGEI 172
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A2D4BWY8_PYTIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWY8_PYTIN) HSP 1 Score: 224 bits (571), Expect = 6.180e-64 Identity = 112/182 (61.54%), Postives = 136/182 (74.73%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELLPSRGSSSK 631
R FFD++IGGE AGR+VFKLY D VP T+ENFR LCTGE G G+TTG+ LH+KG FHRVI GFM QGGDF R+GTGGESIYG +F DE + +H + LLSMANAG+N+NGSQFF+TT P HLDG HVVFGE+ESG D + K+ VET +D P+++Q V IEDCGE + + K
Sbjct: 2 RVFFDISIGGESAGRIVFKLYDD-VPKTSENFRGLCTGEYGIGKTTGKPLHFKGSVFHRVIKGFMLQGGDFSNRDGTGGESIYGSRFADES--FRHRHTRAGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGEVESGMDVVRKIENVETGPRDRPVAMQTVSIEDCGEARAKKKDAKK 180
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A1B0D8K0_PHLPP (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D8K0_PHLPP) HSP 1 Score: 223 bits (569), Expect = 1.030e-63 Identity = 110/182 (60.44%), Postives = 136/182 (74.73%), Query Frame = 2
Query: 62 DMAPAAPTRCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGELL 607
+ + A+ TRCFFD+AIGG PAGR+VF+L+ D VP TAENFR LCTGEKG G+TTG+ LHY GV FHRV+ FM Q GDF +NGTGGESIYGG F+DE LKH+K LLSMAN GKN+NGSQFF+TT PA HLD +HVVFG++ SG D + ++ ++ D+ P LQ I +CGEL+
Sbjct: 12 ERSSASRTRCFFDIAIGGLPAGRIVFELFADVVPKTAENFRALCTGEKGLGKTTGKPLHYSGVIFHRVVKDFMIQAGDFSNKNGTGGESIYGGTFEDE--NFTLKHDKPFLLSMANRGKNTNGSQFFITTQPAPHLDNVHVVFGQVVSGQDLVTQLEQLAVDRNSRP--LQDASIANCGELV 189
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A3R7HCE3_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HCE3_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.400e-63 Identity = 113/173 (65.32%), Postives = 130/173 (75.14%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 604
R +FD++IGG AGR+VF+LY +P T ENFR LCTGE+G GR+TG+ LHYK VPFHR I GFM QGGDF R NGTGGESIYG KF DE K +HNK LLSMANAGKN+NGSQFF+TT P HLDG HVVFGE+ SG D + KM VET D P +Q V+IEDCGE+
Sbjct: 6 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRTIKGFMLQGGDFSRYNGTGGESIYGEKFADES--FKYRHNKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVSGMDVVRKMENVETVANDKPAPMQAVVIEDCGEV 175
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: A0A3F2RQ90_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ90_9STRA) HSP 1 Score: 224 bits (572), Expect = 3.980e-63 Identity = 113/173 (65.32%), Postives = 130/173 (75.14%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 604
R +FD++IGG AGR+VF+LY +P T ENFR LCTGE+G GR+TG+ LHYK VPFHR I GFM QGGDF R NGTGGESIYG KF DE K +HNK LLSMANAGKN+NGSQFF+TT P HLDG HVVFGE+ SG D + KM VET D P +Q V+IEDCGE+
Sbjct: 6 RVYFDVSIGGSRAGRIVFRLYPG-LPKTTENFRSLCTGERGLGRSTGKPLHYKKVPFHRTIKGFMLQGGDFSRYNGTGGESIYGEKFADES--FKYRHNKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVSGMDVVRKMENVETVANDKPAPMQAVVIEDCGEV 175
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Match: H3G611_PHYRM (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G611_PHYRM) HSP 1 Score: 220 bits (561), Expect = 5.490e-63 Identity = 110/173 (63.58%), Postives = 130/173 (75.14%), Query Frame = 2
Query: 86 RCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGRTTGRMLHYKGVPFHRVIPGFMCQGGDFERRNGTGGESIYGGKFKDEPAGLKLKHNKKHLLSMANAGKNSNGSQFFVTTDPASHLDGLHVVFGELESGADTLAKMSEVETDKKDAPISLQRVIIEDCGEL 604
R +FD++IGG AGR+ F+L+ +P T ENFR LCTGE+G GRTTG+ LHYK VPFHRVI GFM QGGD +GTGGESIYGGKF+DE + +H K LLSMANAGKN+NGSQFF+TT P HLDG HVVFGE+ G D + KM VET KD P ++Q V+IEDCGEL
Sbjct: 1 RVYFDVSIGGSRAGRVEFQLFPG-LPKTTENFRSLCTGERGLGRTTGKALHYKTVPFHRVIKGFMLQGGDLSNHDGTGGESIYGGKFEDES--FRYRHAKAGLLSMANAGKNTNGSQFFITTVPTPHLDGKHVVFGEVVRGIDVMKKMESVETVAKDKPAAMQSVVIEDCGEL 170 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1323.1966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1323.1966.1 >prot_E-siliculosus-1a_F_contig1323.1966.1 ID=prot_E-siliculosus-1a_F_contig1323.1966.1|Name=mRNA_E-siliculosus-1a_F_contig1323.1966.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=651bp MAPAAPTRCFFDMAIGGEPAGRMVFKLYTDKVPLTAENFRCLCTGEKGEGback to top mRNA from alignment at E-siliculosus-1a_F_contig1323:23252..28972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1323.1966.1 ID=mRNA_E-siliculosus-1a_F_contig1323.1966.1|Name=mRNA_E-siliculosus-1a_F_contig1323.1966.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5721bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1323:23252..28972+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1323:23252..28972+ >mRNA_E-siliculosus-1a_F_contig1323.1966.1 ID=mRNA_E-siliculosus-1a_F_contig1323.1966.1|Name=mRNA_E-siliculosus-1a_F_contig1323.1966.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3906bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1323:23252..28972+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |