mRNA_E-siliculosus-1a_F_contig1311.1900.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A6H5JZI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI2_9PHAE) HSP 1 Score: 741 bits (1914), Expect = 1.610e-249 Identity = 461/529 (87.15%), Postives = 469/529 (88.66%), Query Frame = 2
Query: 317 MGASGSKARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSALDWGSLTLDGESKATGDGLDPALAMTTPRVGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETLLTFXXXXXXXXXXXXXXXXXXXTRESKSAATAISAMTAWSASASARPAPMGXXXXXXXXXXXXXXXXXXRQGPPLRLRSMGGDDTFLSXXXXXXXXXXXMG---LKTPSRTLSRNTSYGNLLRSPLVGHGLRGPAAMSPRPRGFFNAVGGPAGAGEGGGVTATAKGRGWRGEESLKTPKPGASGLGRTWGEDELRRADGGKGXXXXXXXXLRKERERNIPPTPITTGRTRRRT 1894
MGASGSKARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKM+FLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSALDW S TLDGE+K TG GLDPALAMTTPRVGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETL TF TRESKSAATAIS + AWSASASARPA MGXXXXXXXXXXXXXXXX RQ PPLRLRS XXXXXXXXXXX LKTPSRTLSRNTSYGNLLRSPLVGHGLRGPAAMSPRPRGFFNAVGGPAGAG+GGGVTA G GEESL+TP+PGASG+GRTWGEDELRRADG KG +RKERERNIPPTPITTGRTRRRT
Sbjct: 1 MGASGSKARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMRFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSALDWDSRTLDGETKTTGYGLDPALAMTTPRVGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFPSDAHFSLATSPSARRSTCETLTTFDSPHRSSAVSALPFTTPRRTRESKSAATAISCVAAWSASASARPASMGXXXXXXXXXXXXXXXX--RQAPPLRLRSXXXXXXXXXXXXXXXXXXXXXXXXXLKTPSRTLSRNTSYGNLLRSPLVGHGLRGPAAMSPRPRGFFNAVGGPAGAGDGGGVTAXXXXXGSGGEESLQTPRPGASGVGRTWGEDELRRADGRKGGGGG----VRKERERNIPPTPITTGRTRRRT 523
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: D8LIC5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI) HSP 1 Score: 134 bits (338), Expect = 2.720e-29 Identity = 91/283 (32.16%), Postives = 128/283 (45.23%), Query Frame = 2
Query: 359 EGRLAGTK-----FDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRSALDWGSLTLDGESKATGDGLDPALAMTTPR------------VGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPR-SMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFPSDAH 1153
E R+A T+ D+ E+ VI T+KDL ++ G IDK TFLQ P+PGL+G+RLF D SG I +++FV GLAV CRG+ EEK++F+F +YD++ G + RDEL +LN VP++++ G V A + +G +P A P VG+ + + S GG A P +FTN I DQA E L+F +F+ W + P V LQ FP D H
Sbjct: 3 EQRVAYTRTEIVPVDECEIKVIKETFKDLCHVNGGSM---RIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFG-RAVALDATAAEERARGSALRPRAEGREPPPAGVAPESVGGEGAAAGAVVGAAAHATELKAGSAGGEGESSGRSRRGTARSDS--STEGGASFAAAQHHPHWEIFTNNDIVDQAFEECDLNQTGKLSFPEFRLWVERNPIVTQFLQSVFPYDEH 279
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A7S3HBN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN9_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.460e-28 Identity = 87/287 (30.31%), Postives = 133/287 (46.34%), Query Frame = 2
Query: 356 KEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPR---------TLLNIGIEP--------VDRSALDWGSLTLDGESKATGDGLDPALAMTTPRV--------GSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEGSDKSLTFDQFQRWAQSTPAVQALLQGAFP 1141
KE ++A KFD E+HV+ T++DL+ S G IDK TFLQ FP+ GL+G+RLF D+ K+G I FDDF++GLA CRG++++K+ F+F +YD++ D + + +L +LNQ+P+ TL + +P ++R GS T E G D A P + G R D GG +T D +TN + ++A E D L+++QF+ W Q TPA+ ++ P
Sbjct: 25 KEAKIAAQKFDTDEIHVLRKTWQDLSDRSDGS----GIDKETFLQYFPLNGLLGERLFAQFDNKKTGSIDFDDFILGLATVCRGSMDDKIHFVFNMYDVSHDNTVSKQDLTTLLNQIPKEALSDPSHHTLDHFSNQPPHSPLPFEMNRQRSHSGSSTTLSEINGAGSTDDNHTAPALPPLQQTFGNAPGILERSDSDAPAPVPGLARDTSSNLNL-----------GGQITE-FDYEDVDFYTNHDMVEKAFEECDLNHDGRLSYEQFKMWVQRTPALMEYIESILP 295
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A6H5L0T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 7.650e-27 Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 2
Query: 317 MGASGSKARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIG 730
MG S S L E R A +FD+ E+ VI T+KDL ++ G IDK TFLQ P+PGL+G+RLF D SG I +++FV GLAV CRG+ EEK++F+F +YD++ G + RDEL +LN VP++++ G
Sbjct: 1 MGQSNSNFE--LASEARRAAERFDECEIKVIKETFKDLCHVNGGSM---RIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFG 133
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A836CA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA22_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.160e-24 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 2
Query: 350 LTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLN 700
L E R A +FDD E+ VI T+KDL LS GD IDK TFLQ FP+PGL+G+RLF D G + +++FV GLAV CRG+ EK++F+F +YD++ G + R EL +++
Sbjct: 10 LAAEARRASERFDDCEIKVIRETFKDLCHLS-GDN--TRIDKETFLQYFPLPGLLGERLFAVFDKKNIGEVDYEEFVCGLAVTCRGSWAEKVEFIFNLYDVHGVGAVSRGELAALVS 123
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A835YJT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT6_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.650e-24 Identity = 49/108 (45.37%), Postives = 75/108 (69.44%), Query Frame = 2
Query: 377 TKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLN 700
T FD E+ V+ T+KDL +S G S+DK TFLQ FP+PGL+G+RLF D+ +SG++ F++FV GLAV CRG ++K+ F+F +YD++ G + R+EL +++
Sbjct: 2 TCFDHCEITVLRQTFKDLCAISGK---GTSVDKETFLQYFPLPGLLGERLFAVFDTKRSGKVDFEEFVCGLAVTCRGDWDQKVDFIFSLYDVHGTGAVSREELTALVS 106
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A2D4CGZ4_PYTIN (Protein kinase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGZ4_PYTIN) HSP 1 Score: 115 bits (287), Expect = 1.270e-23 Identity = 57/128 (44.53%), Postives = 86/128 (67.19%), Query Frame = 2
Query: 344 RPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNI 727
R L+ E R A KF + E+H++ T+K LA K G ++DK TFL+ FP+PGL+G+RLF +D + SG I++++FV GLA+ RG+ EK++F+F +YD+ G I R EL+ ML+Q P + L+I
Sbjct: 13 RRLSVEEREAMKKFCEEEMHLLRETFKGLADA----KNGNTVDKETFLKCFPLPGLLGERLFEVIDKDGSGSIAYNEFVYGLAILFRGSQREKLKFIFDLYDLTATGSISRHELVTMLHQFPESALDI 136
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A8K1FIK0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIK0_PYTOL) HSP 1 Score: 116 bits (290), Expect = 2.330e-23 Identity = 63/154 (40.91%), Postives = 99/154 (64.29%), Query Frame = 2
Query: 344 RPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLL---NIGIEPVDRSALDWGSLTLDGESKA 796
R + E R A KF + E+H++ T+K LA + K G ++DK TFL+ FP+PGL+G+RLF +D + SG I +++FV GLA+ RGT +EK++F+F +YD+++ G I R EL+ ML+Q P + L N+ EP D S + + ++ E +A
Sbjct: 13 RRFSMEEREAMKKFCEEEIHLLRETFKGLANV----KNGAAVDKETFLKCFPLPGLLGERLFEVIDKDGSGSIGYNEFVYGLAILFRGTRKEKLKFIFDLYDLSDTGSISRYELVTMLHQFPASTLEHLNLTEEP-DTSTSEPSTKNINDEIEA 161
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: K3X2U7_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2U7_GLOUD) HSP 1 Score: 112 bits (279), Expect = 4.000e-23 Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 2
Query: 344 RPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNI 727
R L+ E R A KF D E+H++ T+K LA S G ++DK TFL+ FP+PGL+G+RLF +D ++S I +++F+ G+A+ RG+ +EK++F+F +YD++ G I R EL+ ML+Q P + L +
Sbjct: 13 RRLSVEEREAMKKFGDEEMHLLRETFKGLANSSNG----YAVDKETFLKCFPMPGLLGERLFEVIDKDRSDSIGYNEFLHGVAILFRGSRKEKLKFIFDLYDLSRSGSISRHELVTMLHQFPESALEL 136
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Match: A0A1D3PBV9_PLAMA (Calcium-dependent protein kinase 7, putative n=3 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1D3PBV9_PLAMA) HSP 1 Score: 111 bits (278), Expect = 1.300e-21 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 2
Query: 335 KARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMQFLFGVYDMNEDGLIGRDELLLMLNQVP 709
K R K +L KF+ EL V+ YK+L S IDK TFLQ FP+PGL G+RLF + +G I F++F++G+A+CCRGT +K+ LF ++D+N DG I + E++ ML+ +P
Sbjct: 9 KEREDQKKNFKLCSKKFETDELEVLKKIYKELGSRSSSSH----IDKETFLQFFPLPGLWGERLFLKFNFKNTGYIDFEEFIIGIAICCRGTKSDKINILFDIFDLNSDGYIQKSEMVAMLSNIP 129 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1311.1900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1311.1900.1 >prot_E-siliculosus-1a_F_contig1311.1900.1 ID=prot_E-siliculosus-1a_F_contig1311.1900.1|Name=mRNA_E-siliculosus-1a_F_contig1311.1900.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=526bp MGASGSKARRPLTKEGRLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESback to top mRNA from alignment at E-siliculosus-1a_F_contig1311:8946..16655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1311.1900.1 ID=mRNA_E-siliculosus-1a_F_contig1311.1900.1|Name=mRNA_E-siliculosus-1a_F_contig1311.1900.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7710bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1311:8946..16655- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1311:8946..16655- >mRNA_E-siliculosus-1a_F_contig1311.1900.1 ID=mRNA_E-siliculosus-1a_F_contig1311.1900.1|Name=mRNA_E-siliculosus-1a_F_contig1311.1900.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3156bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1311:8946..16655- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |