mRNA_E-siliculosus-1a_F_contig1310.1891.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1310.1891.1
Unique NamemRNA_E-siliculosus-1a_F_contig1310.1891.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A6H5JYK5_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK5_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.750e-61
Identity = 146/171 (85.38%), Postives = 147/171 (85.96%), Query Frame = 1 
Query:    4 GAVEMKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKERDESLQGSKKDLIARLLAWEKTNQS 516
            GAVEMKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRRE+EAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAXXXXXXXXXXXXXXXXXXXXX                        LLKERDESLQGSKKDLIARLLAWEKTNQS
Sbjct:   92 GAVEMKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREKEAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAXXXXXXXXXXXXXXXXXXXXXAGSGGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLIARLLAWEKTNQS 262
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: D7FHS2_ECTSI (Similar to PDGF associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS2_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 7.250e-58
Identity = 143/167 (85.63%), Postives = 143/167 (85.63%), Query Frame = 1 
Query:   16 MKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKERDESLQGSKKDLIARLLAWEKTNQS 516
            MKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEAR  XXXXXXXXXXXXXXXXXXXXXXXX                     LLKERDESL GSKKDLIARLLAWEKTNQS
Sbjct:    1 MKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARXXXXXXXXXXXXXXXXXXXXXXXXXXGGPQKLNPLEVKKMNPTRLKELLKERDESLHGSKKDLIARLLAWEKTNQS 167
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A7M7NR81_STRPU (PP28 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NR81_STRPU)

HSP 1 Score: 86.7 bits (213), Expect = 3.280e-16
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1 
Query:   28 KAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARK 291
            KAKGV  LIE+ NPN + +  +M KA ++D+  AP ++SRRERE +E Q+ KD YMK H  GKT EA+ D+ARLA++RK+REEA+ +K
Sbjct:   78 KAKGVEGLIEIENPNRRVQ--KMQKAVNVDVEQAPTQISRREREEIEKQQAKDRYMKAHQAGKTDEARADLARLAIIRKQREEAQRKK 163
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A8C9RXJ8_SCLFO (28 kDa heat- and acid-stable phosphoprotein-like n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RXJ8_SCLFO)

HSP 1 Score: 84.7 bits (208), Expect = 9.540e-16
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1 
Query:   22 QPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARK 291
            Q + KGV  LIE+ NPN   +  +  K  D+D+ + P ELSRRERE +E QR KDHYMKLH EGKT++AQ D+ARLA+++K+REEA ARK
Sbjct:   54 QQRRKGVEGLIEIENPNRITQNSK--KVTDLDV-SVPKELSRREREEIEKQRAKDHYMKLHLEGKTEQAQADLARLAIIKKQREEA-ARK 139
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A8K0GDC8_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0GDC8_9COLE)

HSP 1 Score: 85.5 bits (210), Expect = 1.110e-15
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 1 
Query:   25 PKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAE 282
            PKAKGVS+LIE+ NPN   K  + +    +D A    +LSRRERE +E QR + HY KLHAEGKT++A+ D+ARLA++R++REEA+
Sbjct:   74 PKAKGVSNLIEIENPNRVQKKSKKLTTLSVDGAPEKPQLSRREREEIEKQRAQAHYQKLHAEGKTEQARADLARLAIIRQQREEAQ 159
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A5B8MIP5_9CHLO (PP28 domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIP5_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 8.500e-15
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 1 
Query:   28 KAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEA 279
            K KGV  LIEV NPN KPK     KA+D D+ +AP  L+RREREA+EAQR K+ Y KL  EGKT++A+ D+ RLAL+RK+REEA
Sbjct:   68 KKKGVEGLIEVNNPNFKPKKAGT-KARDADLNSAPT-LTRREREALEAQRSKERYFKLQKEGKTEQARKDLERLALIRKQREEA 149
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A0K8RRU9_IXORI (Putative casein kinase substrate phosphoprotein pp28 (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RRU9_IXORI)

HSP 1 Score: 83.2 bits (204), Expect = 8.680e-15
Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1 
Query:   13 EMKQPKAKGVSSLIEVANPN-AKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARK 291
            E +Q KAKGV  LIEV NPN  + K  ++ +  + D+A AP +LSRRERE VE Q+ K HY K+HA GKT+EA+ D+ARLAL+RK+REE   R+
Sbjct:   78 EEEQQKAKGVEHLIEVENPNRVEKKVKKVAQLDEKDLAEAP-QLSRREREEVEKQKAKVHYQKMHAAGKTEEARADLARLALIRKQREEQARRR 170
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BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: UPI001E279912 (28 kDa heat- and acid-stable phosphoprotein-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E279912)

HSP 1 Score: 82.8 bits (203), Expect = 9.470e-15
Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 1 
Query:   28 KAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARK 291
            KAKGV SLIE+ NPN   K  + +   + D+  A  +LSRRERE +E Q+ K HY KLHAEGKT +A+ D+ARLA+++++REEA  R+
Sbjct:   74 KAKGVQSLIEIENPNRVQKKNKKLSTLNNDVDNAAPQLSRREREEIEKQKAKAHYQKLHAEGKTDQAKADLARLAIIKQQREEARLRR 161
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: A0A085NRR6_9BILA (PP28 domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085NRR6_9BILA)

HSP 1 Score: 82.8 bits (203), Expect = 1.010e-14
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1 
Query:   28 KAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEA 279
            K KGV  LIE+ NPN +    +  K  D+++   P E+SRREREAVE +R + HY+ LHAEGKT+EA+ D+ARLAL+RK+REEA
Sbjct:   88 KHKGVQHLIEIENPNRR--VVKNKKVTDVNVHKGPAEMSRREREAVEKERARQHYLALHAEGKTEEARADLARLALIRKQREEA 169
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Match: UPI001D075718 (28 kDa heat- and acid-stable phosphoprotein n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D075718)

HSP 1 Score: 82.4 bits (202), Expect = 1.230e-14
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1 
Query:   28 KAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARK 291
            KAKGV SLIE+ NPN   K  + + A + ++  A  +LSRRERE +E Q+ K HY KLHAEGKT +A+ D+ARLA+++++REEA  R+
Sbjct:   72 KAKGVQSLIEIENPNRIQKKNKKLSALNSNIDNAAPQLSRREREEIEKQKAKAHYQKLHAEGKTDQAKADLARLAIIKQQREEARLRR 159
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1310.1891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYK5_9PHAE3.750e-6185.38SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHS2_ECTSI7.250e-5885.63Similar to PDGF associated protein n=1 Tax=Ectocar... [more]
A0A7M7NR81_STRPU3.280e-1654.55PP28 domain-containing protein n=1 Tax=Strongyloce... [more]
A0A8C9RXJ8_SCLFO9.540e-1657.7828 kDa heat- and acid-stable phosphoprotein-like n... [more]
A0A8K0GDC8_9COLE1.110e-1554.65Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A5B8MIP5_9CHLO8.500e-1560.71PP28 domain-containing protein n=1 Tax=Chloropicon... [more]
A0A0K8RRU9_IXORI8.680e-1555.32Putative casein kinase substrate phosphoprotein pp... [more]
UPI001E2799129.470e-1552.2728 kDa heat- and acid-stable phosphoprotein-like n... [more]
A0A085NRR6_9BILA1.010e-1455.95PP28 domain-containing protein n=1 Tax=Trichuris s... [more]
UPI001D0757181.230e-1452.2728 kDa heat- and acid-stable phosphoprotein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1310contigE-siliculosus-1a_F_contig1310:6825..11562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size504
Model size1469
Exons4
Ec32 orthologEc-07_006570.1
Ec32 ortholog descriptionCasein kinase substrate, phosphoprotein PP28
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG3375@1,KOG3375@2759
EggNOG free text desc.Casein kinase substrate phosphoprotein PP28
GOsGO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008283,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0019838,GO:0023052,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0032940,GO:0036230,GO:0042119,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043299,GO:0043312,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048008,GO:0048407,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0065007,GO:0070013,GO:0071944,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:1901363,GO:1904813
Preferred namePDAP1
Seed eggNOG ortholog2880.D7FHS2
Seed ortholog evalue5.5e-49
Seed ortholog score200.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1310.1891.1prot_E-siliculosus-1a_F_contig1310.1891.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1310 7775..11547 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927833.3817296-UTR-E-siliculosus-1a_F_contig1310:6824..77741622927833.3817296-UTR-E-siliculosus-1a_F_contig1310:6824..7774Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1310 6825..7774 -
1696318699.7382584-UTR-E-siliculosus-1a_F_contig1310:6824..77741696318699.7382584-UTR-E-siliculosus-1a_F_contig1310:6824..7774Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1310 6825..7774 -
1622927833.438027-UTR-E-siliculosus-1a_F_contig1310:11547..115621622927833.438027-UTR-E-siliculosus-1a_F_contig1310:11547..11562Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1310 11548..11562 -
1696318699.7962797-UTR-E-siliculosus-1a_F_contig1310:11547..115621696318699.7962797-UTR-E-siliculosus-1a_F_contig1310:11547..11562Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1310 11548..11562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927833.3959055-CDS-E-siliculosus-1a_F_contig1310:7774..78971622927833.3959055-CDS-E-siliculosus-1a_F_contig1310:7774..7897Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 7775..7897 -
1696318699.747727-CDS-E-siliculosus-1a_F_contig1310:7774..78971696318699.747727-CDS-E-siliculosus-1a_F_contig1310:7774..7897Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 7775..7897 -
1622927833.4069524-CDS-E-siliculosus-1a_F_contig1310:8337..85021622927833.4069524-CDS-E-siliculosus-1a_F_contig1310:8337..8502Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 8338..8502 -
1696318699.7581725-CDS-E-siliculosus-1a_F_contig1310:8337..85021696318699.7581725-CDS-E-siliculosus-1a_F_contig1310:8337..8502Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 8338..8502 -
1622927833.4183757-CDS-E-siliculosus-1a_F_contig1310:9938..100611622927833.4183757-CDS-E-siliculosus-1a_F_contig1310:9938..10061Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 9939..10061 -
1696318699.7744687-CDS-E-siliculosus-1a_F_contig1310:9938..100611696318699.7744687-CDS-E-siliculosus-1a_F_contig1310:9938..10061Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 9939..10061 -
1622927833.428185-CDS-E-siliculosus-1a_F_contig1310:11454..115471622927833.428185-CDS-E-siliculosus-1a_F_contig1310:11454..11547Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 11455..11547 -
1696318699.7846842-CDS-E-siliculosus-1a_F_contig1310:11454..115471696318699.7846842-CDS-E-siliculosus-1a_F_contig1310:11454..11547Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1310 11455..11547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1310.1891.1

>prot_E-siliculosus-1a_F_contig1310.1891.1 ID=prot_E-siliculosus-1a_F_contig1310.1891.1|Name=mRNA_E-siliculosus-1a_F_contig1310.1891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=168bp
MKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAV
EAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAEEAAAEE
ASGKAKMEKEAKAKAGSGGPQKLNPLEVKKMNPTRLKELLKERDESLQGS
KKDLIARLLAWEKTNQS*
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mRNA from alignment at E-siliculosus-1a_F_contig1310:6825..11562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1310.1891.1 ID=mRNA_E-siliculosus-1a_F_contig1310.1891.1|Name=mRNA_E-siliculosus-1a_F_contig1310.1891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4738bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1310:6825..11562- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCGGGGGCAGTCGAGATGAAGCAGCCGAAGGCCAAGGGGGTATCCTCGTT
GATAGAGGTGGCGAACCCGAACGCCAAGCCCAAGGCCGGGCGGATGATGA
AGGCGAAGGTGAGAGAGTTTTGCTCGAATCATTCCCTGGCAATGGTACGG
AGCGCGCTTGTGATTTGAAAAAAGAGGTTGTGGGCAATATTCTAATATTT
CATGCGATGCGTGGAGAGGCCGGTTCTGTTAGTGTCAGTGGTTTACGGAT
GTACACGGACGGTGCCCTCTGCTGCAGCCGGGTTCGCACTCTCCCCGCAC
GAGTATTGGTGCACCACAGAGCAGCACTAGTACCCTATGCCGCTAGAGCA
CCGCTGTAGCCGTCACCTACTGCTACTTGCATCCTTGGTGGGCACAACCG
TACTGTGTGCAAGTCTGGGAGAAGAAACATTTCACAACACTAGGTCATGA
TGTGCGCGTCTTGGTCTTCGAGGGTACCCGCTCGAGGACTCTGTTCGGCG
GTAGTGATGTGCAGAGTATCCTTTCTCGCCTACCCTCTGCTCCTCGTGTG
ACACAGGATCGGCGTTTTCTCTGTCGTGGGAGCGCATCCCGCCTTCCTAG
AATATATATGTACGTACGCTCAACATTCACACACGAAATTACCCCCGCTT
TGGGTCCTACAGCACGAGCAAGCATGATTCCGCGTACCCCCCGAAGGAAG
AAGGGTCTTCATGTGCTCGCCGCTCTAAGCGAAATCAGATCGGACATCTG
TCTGTCGCGTTGTCACGAGTGGCACAACAAGCAGTGTCTTTCCCCACGCA
ATGTTTCGATTGCGGGGAGAACATCGAGTGTTGAGATGTGACACGTCGAC
CTCAGCACCCCGAAAACATGGGACGGGTGTATCCCCTGTGTCCTCCCGAT
CCTCAGCTTTGTTTTCCTACACCCGCCTTGCCATGCAGTGCCGCGGGAGG
ATACGGGTGGTGGTAGCCTGAGGGAACGAGTTTGTGTATTCTTGAAACTT
TCACCGGGGCACAGGAGTGCCTTCTGCCTGATCACAAAATCCTCAGTCCC
TGCTATGATGCCGGGGTGTCGGGATCGCCATCTCGCACTATACCACCTTA
ACCAACCCCTTCCTCTCCCTTCATCTGCTGATCTAGCGTTGTCAAACGCG
TGGCCCTTACTCCGTCAACCCTCAGCCCACCGCGAAAAGACCTCCATTCA
CTCCTCTCGCGTCTTCCGCTCCTCTGTTTGCTCATTCCTGCCACAGGAGC
GACAGACAATCGCACTCTAACCGCGTGCACTCCGTCATGCTCACACACAA
CCCATCTACAGCACCACGCTCCCATTCGCACAATCCTCGCGTCGTACCTC
TTGTATCCGTGCACCGGGACGAGGCGCGCGTTCGTCACCGATCGTTCGCT
AGAATTGTTTCTGTGCGGTCAATGCATATTTGGCGCTCCTTTGTCACAGG
CCTTTTGTTTCTGTCGGCGCCTCGTTGAACTTGGTACGTCTTTGATCGCA
GGATATGGATATGGCGGCGGCGCCGGTTGAGCTCTCCCGGCGCGAGAGAG
AGGCGGTAGAGGCCCAGAGAAAGAAGGACCACTACATGAAGCTTCATGCG
GAGGGCAAGACTCAAGAGGCGCAGGTGCACATGCGGTATTGGTGCCGTCG
TCTTGTTTGAAGGAAGTTGGGTCGGGGTTTCAAGATGGAGGGCGATAAGT
TTTTGACAGTTCTTGTGATGTTTTCAAGGTTCCTGAAAGGGAGTTCCCTT
GTAGCCAGGGCCAAGTTGAAACCTTTTGCACGCTGCGGTCGTCCCCCGAT
GGACGAAACATTCAAACGAACGCCGTGTATTTGTTGGATCGTTTGTGCTT
ATGTGGTGATGGGATTTGGTCATTAAGGAGGTGCAGAAGACGAATTTTGC
TGCTGACTAATTTTGAAACCAAACGCAAGAGCACCAGAAATTGCACAACA
GACACACCAGACCAGTAGGAAGGCACCGCGAAAAACAGCAATCGTTGATT
CTCGCACAGGGCGGCAGTAGAGGCTGCTCAAAACATACATTTCACGCCTC
CTTTGAAATCAAGACAAAAATTCGCGCTACTCTAAATTCTAGTCAAGAGC
CAAGACGGAAGGCGCTCAAACAAGGTCAGTTTTGAGGGTTAGGTGTCGCA
TTCTATTGTCATCAGTAGAGGACATCACAAAGATGCGTCGTGCGTGCTGG
CACGTTCAGGTTTGCTACTGGAGCTGAAATATCGAAGGTCGCAGCAGCCT
CTGAGAACAGTCCGAAATCTGCGCCGGAACCAAGCGGCATCCACCATTTG
TTACAGCCGTGCTCACCGCCACTGATCCCAATCTCCTGAACTGCGGGTTT
ACAGAAGTAGCTGATGCCACTAGCTACTGCTGACGACCCGTGGTTCAGGG
GTTTACGGTCCGTGGCGGTGAGCACGGCTGTGACAAATGTTGGATGCCGC
TTGGTTCCGCCGCAGGTTTCGGACAGCTTTCAGAGGCTGCTGCGACCTTC
GATATTTCAGCTCTTGTAGCACACCTGAACGTGCCACCACGCACGACTCC
TCTTGATGGCGTCCTCTGCTGATGACAATAGAATGCGACACCTAACCCTG
GCGGGAAGGTTGTTTTCTTTCTTTCTATAGGATTAAAGTGTGGGAAATAG
AGCCAGCGTCACAACCCCTTTTCTACACCCCCTTAATATGCGTGACTGAA
GAATAGATACACTATCGAATCCCGCTATTTCGCTGTGCTCGTGAAAATAA
TGAGGGTGAAAGCATCAACAACACAGGTGTGATTTGCCGCAGTAAGGATT
GTTAGCTTGTTTCATGCAAGCATCAAGTAGAAACCACGAGGTACAAGTGC
CGTGTGCCAGCTGCACGCCAAGAAAATGCCCTGTCCACACCATCTGGAAA
TACGATCGGCCTGCAAACCGCGAGCCTGCAGTCGTGCAAGGACGGCTTAC
GTGCTCCGGGGGCACAGCAGTAGATACCGGGATGTTCGCGAACACCTTGC
GTCAGAAAAGACGCGGGAAAGCTTGCGCATCACCAACCCGTGTCTCGCTC
GTGTATGCAGGTGGACATGGCGCGGCTCGCGCTGGTCCGCAAGAGGCGAG
AGGAGGCGGAGGCGCGGAAGGCGGAGGAGGCGGCAGCCGAGGAAGCTTCG
GGTAAAGCCAAGATGGAGAAGGAAGCCAAGGCCAAGGCGGGCAGCGGCGG
GCCCCAGAAGCTCAACCCTCTAGAGGTACAAAGACGGCAGCAGACGTTTG
AGCGAAAGTGTTGGTGTTCGTACTTGTTCAAGCCTGCACTGGTTTCGTAC
TTTGGGTGCGCGAAACTCTTGATGATGTGGAGGTCGTGTACCATATTGCC
ATGTGTGTGCTTTCTAGCAAGACGTTTGACGCTTTCGTCTAGACATTTTT
CGTTTTGTTTGGTCGTTGACAACTCGGTGCATTGTTGTGTTTGCCATTGT
CCTCACATCTCTACTCGATACCTCTAACATTTTCAATATGTTCGATAGTG
GCATCTTGTTACTGTTGCACCTGTTGTGTTTGTTGTTATCCCCACATCTC
TGCTCGGTTCTACCTTATATTGAACAACTATACCGCATGGATACCCTAGG
GTACGGGTTTTCCAGTATGTGACACATGTGACAACAAGTGCGTACGTATT
ACTAACAATGGACAGGTGAAGAAGATGAACCCGACACGGCTAAAGGAGCT
GCTCAAGGAACGAGACGAGAGCCTGCAGGGCAGCAAGAAGGACCTAATTG
CAAGGCTTTTGGCGTGGGAGAAGACAAACCAGTCTTGATCTGAAAAATAG
TTTGACGGGGAAAGTGAAAGCCTGGAGCTAGTGTGTTCTAAATTGTTCTG
AACCTAGGCTTGAAAAGGTTTTTAAGAGGTGGTGCTCGTGTGTCAAGTGT
CTGCTCGCTCAGAGATCGTCCAATTTTCCGAAAGTCTCTTGTTGCCTGCC
CTCTTGTTCGCGCACCCTCTTTGAGGAGGCGTCTGCACTCTAACCGTGGG
TCAACACGCCGTTCTCATTGGTGTTAAACATGGGCAACCATGGTCTTCTC
CGCGCTTGTTTGTTGTCCGCTGGTTGATGTGTTTCGAGGTAGCGGGATAG
TGCCCCTCGAGTGACTGGTCCCATGAGACGCACGCCGGTAGCAGGGGTTT
TCCCCGCTGCGATTCACGTACTTGTAAGCTTTGCATGTCTGGTAGCCGCC
GTTCGAGGTTACGTTCACCGTTTGGGATGGCGAACAGGATTGCAATTTGC
CAGTGAAGAGAGGGGGGATGGTGAAAGGGGACATGATGTTTGACATGTTA
CATTGTACGTGTTTCCGAGCCGAGCGGACGGAGACTTGATTGTTCTGTTG
TGTAAATCACGTCAAGTGGCCACTACTGTCAGAGAGCTTTTGCTGCCCAG
TGTGGTGTTAACTTGTTGGAGAATTGCTGTAGAGCCACCTTGAAAGCGAA
CTGCTCAGCCGATGGAGCCGCGACAGCCGCTTTGGTCAGCTTTTTGCTCC
TCCACCAGCTGCGTTGGCTTGGAACAGTGTTGCCTCGTTGCCTGCCGCGC
CCTTGCATGTGGTGGTCGGTTGCCGTCCCGCCGACGGCATCGTTAGTTGT
TACGATCATTGTGGCGACCGAGCATAAGAAACGCTCGCGGCCGTTCTACC
GCAGTGGACTTTCGTAGCACACACAGCAGAATATTGGTCCCAGCCTCGGC
CCTGTCCATACGTGTTGTTCGGAGCACCTCAGCGGGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1310:6825..11562-

>mRNA_E-siliculosus-1a_F_contig1310.1891.1 ID=mRNA_E-siliculosus-1a_F_contig1310.1891.1|Name=mRNA_E-siliculosus-1a_F_contig1310.1891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1008bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1310:6825..11562- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGCAGCCGAAGGCCAAGGGGGTATCCTCGTTGATAGAGGTGGCGAA
CCCGAACGCCAAGCCCAAGGCCGGGCGGATGATGAAGGCGAAGATGAAGC
AGCCGAAGGCCAAGGGGGTATCCTCGTTGATAGAGGTGGCGAACCCGAAC
GCCAAGCCCAAGGCCGGGCGGATGATGAAGGCGAAGGATATGGATATGGC
GGCGGCGCCGGTTGAGCTCTCCCGGCGCGAGAGAGAGGCGGTAGAGGCCC
AGAGAAAGAAGGACCACTACATGAAGCTTCATGCGGAGGGCAAGACTCAA
GAGGCGCAGGATATGGATATGGCGGCGGCGCCGGTTGAGCTCTCCCGGCG
CGAGAGAGAGGCGGTAGAGGCCCAGAGAAAGAAGGACCACTACATGAAGC
TTCATGCGGAGGGCAAGACTCAAGAGGCGCAGGTGGACATGGCGCGGCTC
GCGCTGGTCCGCAAGAGGCGAGAGGAGGCGGAGGCGCGGAAGGCGGAGGA
GGCGGCAGCCGAGGAAGCTTCGGGTAAAGCCAAGATGGAGAAGGAAGCCA
AGGCCAAGGCGGGCAGCGGCGGGCCCCAGAAGCTCAACCCTCTAGAGGTG
GACATGGCGCGGCTCGCGCTGGTCCGCAAGAGGCGAGAGGAGGCGGAGGC
GCGGAAGGCGGAGGAGGCGGCAGCCGAGGAAGCTTCGGGTAAAGCCAAGA
TGGAGAAGGAAGCCAAGGCCAAGGCGGGCAGCGGCGGGCCCCAGAAGCTC
AACCCTCTAGAGGTGAAGAAGATGAACCCGACACGGCTAAAGGAGCTGCT
CAAGGAACGAGACGAGAGCCTGCAGGGCAGCAAGAAGGACCTAATTGCAA
GGCTTTTGGCGTGGGAGAAGACAAACCAGTCTTGAGTGAAGAAGATGAAC
CCGACACGGCTAAAGGAGCTGCTCAAGGAACGAGACGAGAGCCTGCAGGG
CAGCAAGAAGGACCTAATTGCAAGGCTTTTGGCGTGGGAGAAGACAAACC
AGTCTTGA
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