mRNA_E-siliculosus-1a_F_contig131.1888.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: D7G1H5_ECTSI (Regucalcin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H5_ECTSI) HSP 1 Score: 632 bits (1629), Expect = 2.620e-224 Identity = 301/328 (91.77%), Postives = 308/328 (93.90%), Query Frame = 2
Query: 308 MLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
MLAEG SWNHLEQELWWVDINGKMI RLFCKSDEDGEDGLGA+L AEGW+VQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAG EDEYEQLPNTRLNDGR CDRQGRFLCGGINLENIDQPPD+WKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQ+IARYDYNP+TGDI+NKRVFVELEEGYPDGATVDTEGCVWVA+FSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG
Sbjct: 1 MLAEGVSWNHLEQELWWVDINGKMIMRLFCKSDEDGEDGLGASLAAEGWDVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGGEDEYEQLPNTRLNDGR----------------CDRQGRFLCGGINLENIDQPPDLWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQKIARYDYNPDTGDITNKRVFVELEEGYPDGATVDTEGCVWVAMFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 312
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: A0A835YSU6_9STRA (Regucalcin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU6_9STRA) HSP 1 Score: 280 bits (717), Expect = 6.310e-86 Identity = 167/395 (42.28%), Postives = 216/395 (54.68%), Query Frame = 2
Query: 119 SSKASVLVAAAATAAFAVAYAIARPRKLKRRTDVTGRLQNLVWHKPLSELPTDGAVLLVDGAYMLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNK-RVFVEL--EEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRL-EGVKGIPEPRFRG 1291
S K ++L AA AA A R + RRT T L W L ++P + VLL++ ++ EG W+ Q L WVDI G+ ++RL ++ E W + R LREG A K PL++ FEDGF L +P T A +Y Q N RLNDGR CDRQGR +CGG+NL++ID+ DVW +++ E ++LP +RCYN T FSPDGRTMY A+TP ++I YDY+P TG+IS K RV E EEG PDGATVD G VWVA F G + +P+G +R I +P AK TTC IGGP LD LFITSA +GL D + +QP AG + AI+L +G +GIPE RF G
Sbjct: 2 SQKVALLATAAVAAAVIYAGLQRRRKDAARRTTHT-----LAWTGALEDIPENEPVLLMECNALVGEGVVWDAKTQALRWVDIEGRRLYRLRYQTRE-----------VVSWELPKRASMACLREG-AESDKATLPLLMGFEDGFALYNPET------RATQYLPGDYVQEGNIRLNDGR----------------CDRQGRLVCGGVNLDHIDEALDVWHATVSTYQIGEDMRANQVLPGP-YRCYNATSFSPDGRTMYMADTPSKQILAYDYDPMTGNISGKPRVLKEFTEEEGNPDGATVDASGNVWVAEFWAGRINCIAPDGSTVRRIEIPHAKRTTCCCIGGPQLDTLFITSACIGLTDGELKQQPWAGGLMAIKLGKGFRGIPEARFFG 356
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: A0A2V6PCN5_9BACT (SGL domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PCN5_9BACT) HSP 1 Score: 207 bits (528), Expect = 6.410e-59 Identity = 125/330 (37.88%), Postives = 178/330 (53.94%), Query Frame = 2
Query: 308 MLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVEL--EEGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
+L EGA W+ +Q+L+WVDI G+++ R + D + W V GSLA+R G LV+A GF DP+TG + + AA D E R NDG+ DRQGRF G ++ P+ +P ++RL+ R+ + C N C+SPDGRTMY A+TP + + +D++P++GDI+N+RVFV + EG PDGA VD EG VW+A + V R+ P G + R +P+P + TC A GG LD+L++TSA+VGL++ +R QP AG V A+ GV G+PE RFRG
Sbjct: 13 ILGEGALWDAADQKLYWVDIKGRLVHRFDPVTGVDQQ-----------WAVAEDVGSLAVRTGSG--------LVLALRSGFHFFDPATG--ITSLVAAPESDRSEN----RFNDGK----------------TDRQGRFWAGSMH------DPET-RPTGALYRLDADLTCTRMT--DGLICSNTLCWSPDGRTMYHADTPTRTVWAWDFDPDSGDIANRRVFVRVPEHEGAPDGAAVDAEGFVWIAHWDGWRVTRYDPAGRVARVVPLP-VQRATCPAFGGAQLDVLYVTSATVGLSEGERARQPWAGGVLALD-PGVHGLPEARFRG 290
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: A0A2E5KSK1_9PROT (Calcium-binding protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E5KSK1_9PROT) HSP 1 Score: 195 bits (496), Expect = 3.010e-54 Identity = 122/329 (37.08%), Postives = 169/329 (51.37%), Query Frame = 2
Query: 311 LAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELE--EGYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
L EG W+ +Q L+WVD N I RL K+ E W V + GS+ALRE G V+A + GF D +G ED TR NDG+ DRQGRFL G +++ ++ R ++RL+ + ++ E NG CFSPDG T Y A++P + I YDY+ TG++SN R F++LE + +PDGATVD+EGC+W A+ + G+V RFSPEG L+ + VP A + + V GGPDLD+LF+TS + Q + E P G ++AI V G+PEPRF G
Sbjct: 15 LGEGPLWDPRDQVLYWVDSNECRIRRLDPKTGE-----------VVNWLVAEQIGSMALREAGG--------AVIALKSGFHFFDFESGTATPIINPEPGED------RTRFNDGK----------------VDRQGRFLAGSMDMPGLNDS------RGSLYRLDADLSISKLR--ENIGVSNGPCFSPDGGTFYFADSPRRMIWAYDYDVATGEVSNMRTFIDLEPLDAFPDGATVDSEGCLWSALVTKGQVGRFSPEGALMHIVDVP-ADHPSSVMFGGPDLDVLFVTS--IWEWRQVKTENPADGCLYAIHGLEVTGLPEPRFAG 291
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: A0A504LID3_9HYPH (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Mesorhizobium sp. CU2 TaxID=2589985 RepID=A0A504LID3_9HYPH) HSP 1 Score: 191 bits (485), Expect = 1.180e-52 Identity = 118/338 (34.91%), Postives = 176/338 (52.07%), Query Frame = 2
Query: 287 LLVDGAYMLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALR-EGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEEGY--PDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
+LVD +L E W+ E+ L+W+D GK I+R E + W+V + GS+ALR GGA +++ E GF D +TG A+ D + TRLNDG+ DRQGRF+ G ++++ + P+ ++R++ + ++ +E C NG C+S DG+T Y A+T I YDYN +TG ISNKR F EG PDGAT+D EG +W A+ GE+RRF+P+G L R + +P +N T + GGP+LD+L++TSA+ + + G++F IR GV+G+PE RF G
Sbjct: 6 VLVDCRTILGESPIWDVDEERLYWIDSFGKRIYRSTITGTE-----------LKTWDVPGKIGSMALRARGGA---------ILSLESGFHAFDLATG------KASPIADPEADVATTRLNDGK----------------VDRQGRFVAGSMDMDEAN-------PKGSLYRVDVDLSIHKL--EEGIVCSNGPCWSVDGKTFYFADTWADEICAYDYNTDTGSISNKRPFASFREGVGAPDGATIDEEGFLWSAVAYGGELRRFAPDGSLDRRVEMP-VRNVTSLMFGGPNLDVLYVTSAATSPLARFPDDGRLGGSLFEIRGLGVRGVPERRFLG 291
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: A0A5J6N2H8_9PROT (Regucalcin n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6N2H8_9PROT) HSP 1 Score: 190 bits (483), Expect = 2.240e-52 Identity = 121/338 (35.80%), Postives = 177/338 (52.37%), Query Frame = 2
Query: 287 LLVDGAYMLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALR-EGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEE--GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
+LVD +L EG W+ EQ L+W+D G ++R + E + W+V + GS+ALR +GGA V++ + GF D TG D P TR+NDG+ D++GRF+ G +++ P ++RL+ V ++ ++ C NG C+SPDG+T Y A++ + I+ YDY+ ETG SNKR F ++ G PDGATVD EG VW+A+ GE+RR++P+G L RTI +P K T V GGP+LDIL++TS + + + P G++FAI GVKG+PEPRF G
Sbjct: 5 VLVDCKTILGEGPLWDVEEQRLYWIDSFGNKVWRATPEGKE-----------IQTWDVPAKIGSMALRRKGGA---------VLSLQTGFHFLDFKTGKTELI------HDPEPDKPTTRINDGK----------------VDKKGRFIAGSMDMMESG-------PIGALYRLDPDLSVHKL--EDGIICSNGPCWSPDGKTFYFADSWSEAISVYDYDLETGTPSNKRTFCSVKGTGGAPDGATVDAEGYVWMALVYAGEIRRYAPDGRLDRTIKMPVLK-VTSVNFGGPNLDILYVTSMAKPPLPRFPEDGPLGGSLFAITGLGVKGVPEPRFAG 290
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: UPI001CFFF387 (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Oceaniglobus trochenteri TaxID=2763260 RepID=UPI001CFFF387) HSP 1 Score: 190 bits (483), Expect = 2.310e-52 Identity = 122/333 (36.64%), Postives = 160/333 (48.05%), Query Frame = 2
Query: 308 MLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWK--PRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEE---GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
+L EG W+H + LW++D GK +FR + E W V + GS+ALRE G +VA EDGF D +G D P RLNDG+ D GRFLCG ++ D +W+ P V RLE+G I+ C NG CFSPDG T+Y A++ I+ +DY+P TGD +N+R F ++ G PDGATVD EGCVW A G V RF+P+G + R I +P + T +A GG DL LF+TS + + + P GA F I GV G PEPRF G
Sbjct: 12 LLGEGPIWDHDRERLWFIDSLGKRVFRCTAEGGE-----------MRAWTVPSAIGSMALRENGG--------AIVALEDGFHALDLDSGETRPII------DPEPDRPGNRLNDGK----------------VDPAGRFLCGSMDKGETDPTGTLWRLDPDLSVHRLEDG-----II------CSNGPCFSPDGTTLYFADSFSGTISAFDYDPATGDATNRRSFAQMPAVRGGAPDGATVDAEGCVWSACVFDGRVFRFAPDGTVDRVIEMP-VRKITSLAFGGHDLTTLFVTSMAEPPLPKYPGDGPQRGATFRIDGLGVAGRPEPRFAG 291
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: UPI0016617352 (SMP-30/gluconolactonase/LRE family protein n=2 Tax=Pseudaminobacter soli TaxID=2831468 RepID=UPI0016617352) HSP 1 Score: 187 bits (475), Expect = 3.310e-51 Identity = 122/339 (35.99%), Postives = 172/339 (50.74%), Query Frame = 2
Query: 281 AVLLVDGAYMLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYE-QLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEE-GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
A LL+D + EG W+ + L+W DI+G+ ++ + +E + V G A R G +P +V AF DGF L D TG R A +E LP TRLNDGR DRQGRF+ GG++ + + KP + V++L ++R+ D C NGTCFSPDGRTM+ A++P +RI +DY+P TG + +R + G PDG+ VD EG +W AI+ V R+SP+G L R I VP K TC A GG DL LFIT++ G + +P AG++F +R GV+G+ + F G
Sbjct: 3 AELLLDCRNVHGEGIFWSAQHKLLYWTDIDGQQVWTYDPRRKR-----------SESFKVPGPVGCFADRAG-----RPFNEVVAAFADGFALLDLKTGARQDIGA-------FEPDLPTTRLNDGR----------------TDRQGRFIAGGMDQDGV-------KPISSVWQLGTDLTLKRLFGD--VGCANGTCFSPDGRTMWFADSPTKRIDAFDYDPATGALGARRTIAHTPDPGVPDGSCVDAEGFIWNAIWEGYRVERWSPDGRLDRVIDVP-VKKPTCCAFGGEDLATLFITTSRQGETEDDLAREPLAGSLFQVR-PGVRGLQDQPFGG 291
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: UPI001AE02AB2 (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Roseomonas sp. SSH11 TaxID=2820812 RepID=UPI001AE02AB2) HSP 1 Score: 186 bits (471), Expect = 1.400e-50 Identity = 124/348 (35.63%), Postives = 168/348 (48.28%), Query Frame = 2
Query: 257 LSELPTDGAVLLVDGAYMLAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGVFRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEEGYP---DGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
+ +LP + G ++ E W+ +EQ L+WVD + RL + DG A W + + GS R+GG ++ + GF D TG A D P RLNDGR CDR+GR+ CG + P P ++RL+ G R+ D F NG FSPD RT+ ++ + + RYD + E+G ISNKRVF+ G P DGAT D EG W A+ G V RF PEG L R + +P + T C GGPDLD+L++TS +V LN+ +R QP AGAVFA+R GV+G+PEP F G
Sbjct: 1 MPKLPQPEIEVAHQGGDLVGECPMWHPVEQRLYWVDTRRPSLQRL----ETDG--------TARRWPMPSNIGSYVFRQGGG--------VLAGLKQGFATIDLETG------AITPVLDPEPDRPENRLNDGR----------------CDRRGRYWCGS-------RDPGDENPGGSLYRLDPGFSCERM--DTGFIVSNGMAFSPDDRTLIFGDSRGETMWRYDLDMESGRISNKRVFLSTA-GLPWRVDGATFDAEGYYWCALIGDGAVGRFDPEGRLDRIVRLPVSHPTMC-NFGGPDLDVLYVTSGTVFLNEVERARQPLAGAVFALRGLGVRGVPEPFFAG 295
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Match: UPI001FF05989 (SMP-30/gluconolactonase/LRE family protein n=2 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001FF05989) HSP 1 Score: 185 bits (470), Expect = 1.700e-50 Identity = 124/332 (37.35%), Postives = 166/332 (50.00%), Query Frame = 2
Query: 311 LAEGASWNHLEQELWWVDINGKMIFRLFCKSDEDGEDGLGAALVAEGWNVQTRPGSLALREGGARGRKPGYPLVVAFEDGFFLCDPSTGGRVAAAAAAGAEDEYEQLPNTRLNDGRQEAREGRGSSSHFVNVCDRQGRFLCGGINLENIDQPPDVWKPRAGV---FRLEEGKGVRRILPDEEFRCYNGTCFSPDGRTMYAAETPLQRIARYDYNPETGDISNKRVFVELEE--GYPDGATVDTEGCVWVAIFSCGEVRRFSPEGELLRTIPVPGAKNTTCVAIGGPDLDILFITSASVGLNDQQRMEQPNAGAVFAIRLEGVKGIPEPRFRG 1291
L EG W+ EQ L+W+D G ++ +D G + W + GSLALRE G +V+ GF D +TG AE + +L RLNDG+ DRQGRF+ G ++ E R GV FRL+ V + D + C NG CFSPDGRT+Y A+T + I YDY+ ETG + ++RVF E G PDGATVD +G VW G + RF P G + R + +P ++TT + GGPDLDI F+TS + N+Q E+ AG VFAI GV+G+PEPRF+G
Sbjct: 14 LGEGPLWDVAEQRLYWIDSYGPAVY----SADVTGGN-------RRHWPLPEPVGSLALRENGG--------AIVSLRSGFHELDFATG-----EVTLIAETQPGEL-TPRLNDGK----------------VDRQGRFIAGSMDFEE----------RNGVGKLFRLDPNHSVHEL--DRDIICSNGPCFSPDGRTLYFADTGKKLIYAYDYDTETGKVRSRRVFTSFENLRGLPDGATVDADGYVWSTEVYSGRLIRFDPNGVIDRIVGLP-VQSTTSLIFGGPDLDIAFVTSMARPFNNQYHRER-EAGCVFAIHGLGVRGLPEPRFKG 290 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig131.1888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig131.1888.1 >prot_E-siliculosus-1a_F_contig131.1888.1 ID=prot_E-siliculosus-1a_F_contig131.1888.1|Name=mRNA_E-siliculosus-1a_F_contig131.1888.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=394bp MASSKASVLVAAAATAAFAVAYAIARPRKLKRRTDVTGRLQNLVWHKPLSback to top mRNA from alignment at E-siliculosus-1a_F_contig131:58026..69895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig131.1888.1 ID=mRNA_E-siliculosus-1a_F_contig131.1888.1|Name=mRNA_E-siliculosus-1a_F_contig131.1888.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig131:58026..69895- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig131:58026..69895- >mRNA_E-siliculosus-1a_F_contig131.1888.1 ID=mRNA_E-siliculosus-1a_F_contig131.1888.1|Name=mRNA_E-siliculosus-1a_F_contig131.1888.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2364bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig131:58026..69895- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |