mRNA_E-siliculosus-1a_F_contig131.1886.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE) HSP 1 Score: 667 bits (1720), Expect = 4.010e-231 Identity = 515/567 (90.83%), Postives = 518/567 (91.36%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGANANEPRGSSNNDRKGRGQFRAGGPGNKNXXXXXXGRDGRDGDRRPSEMNVKDALAGGLSAPRGVSRRDRGRSNDEGPRDVVIHVDGEDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREVIVVTQSGVDENDRWQADGNGVFAEDGLGGGSAAPASATATTPHSPADDDLRGRIKGRGRRGVGSESPPPRKKAALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXSDGDGTGGAGYPARPAKMAPPAEVGSDKRKRDGSRDSGGRGADKSRGGVGRSDRGRGGGDRNGSGG 1930
MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASL KGKKG GAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGA+ANEPRGSSNNDRKGRGQFRAGGPGNKNXXXXXXGRDGRDGDRRPSEMNVKDALAGGLSAPR SRRDR RS DEGPRDVVIHVDGEDGG XXXXXXXXXXXXXXXXXXXXXX S REVIVVTQSGVDENDRWQAD NGVFAEDGLGGG AA ASAT TTPHSPADDDLRGRIKGR RRGV SESPPPR+KAALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX SDGDGTGGAG PARPAK AP AEVGSDKRKR GSRDSGGRGADKSRG VGRSD+GRGGGDRNGSGG
Sbjct: 1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLPKGKKGTGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANEPRGSSNNDRKGRGQFRAGGPGNKNXXXXXXGRDGRDGDRRPSEMNVKDALAGGLSAPRRGSRRDRARSEDEGPRDVVIHVDGEDGG---VRGRPRLGNGRNVHVRVAGEGXXXXXXXXXXXXXXXXXXXXXXDCEGSGREVIVVTQSGVDENDRWQADENGVFAEDGLGGGPAALASATTTTPHSPADDDLRGRIKGRDRRGVESESPPPRRKAALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDGDGTGGAGSPARPAKRAPAAEVGSDKRKRGGSRDSGGRGADKSRGDVGRSDKGRGGGDRNGSGG 564
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 3.970e-208 Identity = 502/639 (78.56%), Postives = 505/639 (79.03%), Query Frame = 2
Query: 209 RGQAGSDMYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGG-AGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGANANEPRGSSNNDRKGRGQFRAGGPGNKNXXXXXXGRDGRDGDRRPSEMNVKDALAGGLSAPRGVSRRDRGRSNDEGPRDVVIHVDGEDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREVIVVTQSGVDENDRWQADGNGVFAEDGLGGGSAAPASATATTPHSPADDDLRGRIKGRGRRGVGSESPPPRKKAALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXSDGDGTGGAGYPARPAKMAPPAEVGSDKRKRDGSRDSGGRGADKSRGGVGRSDRGRGGGDRNGSGGXXXXXXXXXXXXXXXXXXXSGPXXXXXXXSDAISVTSNGEILNTTFWSWRGLAMS-MVGQLPVA 2119
RGQAGSDMYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKG AGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGA+ANEPRGSSNNDRKGRGQFRAGGPGNKN GRDGRDG+RRPSEMNVKDALAGGLSAPRG SRRDR RS DEGPRDVVIHVDGEDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREVIVVTQSGVDENDRWQADGNGVFAEDGLGGGSAAPAS+T TTPHSPADDDLRGRIKGRGRRGV ES PPRKKAALAP XXXXXXXXXXXXXXX SGP DAISVTSNGEILNTTFWSWRGL MS MVGQLPVA
Sbjct: 25 RGQAGSDMYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGXXXXXXXAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAERDSMMAKRAERFGASANEPRGSSNNDRKGRGQFRAGGPGNKNNDKRAGGRDGRDGERRPSEMNVKDALAGGLSAPRGGSRRDRARSEDEGPRDVVIHVDGEDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEREVIVVTQSGVDENDRWQADGNGVFAEDGLGGGSAAPASST-TTPHSPADDDLRGRIKGRGRRGVECESSPPRKKAALAPXXXXXXXXXXXXXXXXA------------------------------------------------------------------------------------------------------SGPPSGPPAGGDAISVTSNGEILNTTFWSWRGLEMSTMVGQLPVA 560
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A836CB89_9STRA (cwf21 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB89_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.300e-36 Identity = 95/173 (54.91%), Postives = 115/173 (66.47%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEPPP--RKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 733
MYN +G+ TPRGSGTSGHVMSNRSHV+A R + RN G QA W P +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R L + KG+G +H+ KA +N RMR+AFGLG DY GE+FD E Q +K
Sbjct: 1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPE--KGSG---------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 160
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A7S3Y519_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y519_HETAK) HSP 1 Score: 113 bits (282), Expect = 2.810e-25 Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQ 724
MYN +G+ T RGS T+G+V N SHVR Q R + +N G LQ DW+ P ++AN+ +L+HQ+KR++EAK+FELQ + D G ++ EI++K +RK L S + + +G +H R K +++RR+R AFG+ +D+ AG AFD E Q
Sbjct: 1 MYNGIGLATVRGSSTNGYVQRNLSHVRTQQVRNQVAQNKGGLQ--DWDAPKQKQANKAILEHQQKRQIEAKVFELQVQLEDEGLNEEEIDKKCQALRKKLNS---SAKPQQIHEG-------------GTHARAALKEEEDRRLRAAFGIREDFVAGAAFDPELQ 147
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A7R9UG21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG21_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.930e-23 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPR-KANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 733
MY NVG++T RGSGT+G+V NR ++R Q FR + NT D P R +A+ ELL+H RKR +EAK+FE + + D G D +IEE++ ++R LE G+ G+ G GT +SH+R +KA + RR+++AF + +DY G+AFD EA+E++
Sbjct: 1 MYGNVGLKTARGSGTNGYVQRNRGYLRPQKFRARVRDNTQATPFSDPISAPLRAEADAELLEHSRKRAIEAKLFEERVRLEDDGLEDEKIEERLKKMRASLERSSGA------------RGSFGSEGT-NSHVRAARKAQERRRLKDAFRIREDYVEGQAFDREAREQE 156
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: G4Z8N6_PHYSP (cwf21 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8N6_PHYSP) HSP 1 Score: 102 bits (255), Expect = 9.240e-21 Identity = 71/175 (40.57%), Postives = 100/175 (57.14%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWE-------EPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 733
MYN +G+RT RGSGT+G+V N S+V A R + RN + D+ PPP N ++L H++KRKVE ++ E+ M DRG EI+EKV R+ L R +AS G+K A SH R +K ++N+R+++AFG+ DY AGE+FD EAQER+
Sbjct: 1 MYNGIGLRTVRGSGTNGYVQRNLSYVNASRTRQTLARNQRGGASGDFGAHRGGKGRPPP---NADILLHEQKRKVELQLLEISLEMEDRGCDPEEIQEKVKRERERLLARL---NEASDRGGEKAKDA------ESSHARQKRKEEENKRIKDAFGIATDYVAGESFDPEAQERR 163
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A4D9CSM3_9STRA (cwf21 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSM3_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.830e-20 Identity = 65/169 (38.46%), Postives = 105/169 (62.13%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARD-WEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 733
MYN +G++T RGS TSG+V NR +V + R +G +D ++ KAN+E+L+H+RKR++EA+++E++E M D+GYS++EI++K +R+ L+ G +L+ K G+GG T D+H +KA + R+R AFG+ D+ GE +D EAQ R+
Sbjct: 1 MYNGIGLQTARGSATSGYVTKNRGYVPPRRVRQETALVSGHGGPQDTFKAAVLAKANQEILEHKRKRQIEAQVYEMEERMRDQGYSESEIKDKATALRERLK-----GNNLALVAANK-TGSGGSEMT-DTHEVAARKAQEIERLRNAFGIAQDHVEGETWDPEAQNRR 162
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A3KNE2_XENLA (cwf21 domain-containing protein (Fragment) n=1 Tax=Xenopus laevis TaxID=8355 RepID=A3KNE2_XENLA) HSP 1 Score: 99.0 bits (245), Expect = 5.410e-20 Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEER------EGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFD 712
MYN +G+ TPRGSGT+G+V N S VR + R + + + E +K N+++LDH+RKRKVE K EL+E MA++GY+DAEI+EKVA R L+E+ E QKA++ ++H N R+R AFG+ D Y G +FD
Sbjct: 1 MYNGIGLTTPRGSGTNGYVQRNLSSVRHKKDRTDYK---SEEELKKLENLLMKKPNQDILDHERKRKVELKCLELEEMMAEQGYNDAEIQEKVATFRLMLQEKDLTQIKEEEKQKANVS---------------ETHQMAEANEKKNERLRAAFGISDSYVDGSSFD 149
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A225WFR0_9STRA (cwf21 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFR0_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.700e-19 Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRN----TGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 733
MYN +G+RT RGSGT+G+V N S+V A R + RN AR + PP N E+L H++KRKVE ++ E+ M +RG EI+EKV R+ L R +G KA K + SH R +K ++N+R+++AFG+ DY AGE+FD E QE++
Sbjct: 1 MYNGIGLRTVRGSGTNGYVQRNLSYVNASRSRQTLARNQRGGASDFNARGGKSRPP--PNAEILLHEQKRKVEVQLLEMSLEMEERGCDPEEIQEKVKRERERLLARL-NGAKAEKSKDE------------SSHARQRRKEEENKRIKDAFGITTDYVAGESFDPEMQEKR 157
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Match: A0A6P5AXA5_BRABE (serine/arginine repetitive matrix protein 2-like isoform X2 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AXA5_BRABE) HSP 1 Score: 103 bits (256), Expect = 4.180e-19 Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 2
Query: 230 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGI--DRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGK---KGAGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFD 712
MYN +G+ TPRGSGT+G+V N +H+R + ++ + KL A ++P N+E+LDH+RKRKVE K E+QE M ++GYS+ EIE KVA R+ L E+EG G ++ K + +G G A +SH N +M+EAFG+ + Y G +FD
Sbjct: 1 MYNGIGLNTPRGSGTNGYVTRNWAHIRGRKEKVNYKTEEEMKKLDAAMSKKP-----NQEILDHERKRKVELKCMEMQELMEEQGYSEEEIERKVATFRRMLMEKEGVGSTSAGGKEEEVERGPGRP-SANPKESHQLAEANEKKNLKMKEAFGISESYVDGSSFD 160 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig131.1886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig131.1886.1 >prot_E-siliculosus-1a_F_contig131.1886.1 ID=prot_E-siliculosus-1a_F_contig131.1886.1|Name=mRNA_E-siliculosus-1a_F_contig131.1886.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=631bp MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPback to top mRNA from alignment at E-siliculosus-1a_F_contig131:49452..56249- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig131.1886.1 ID=mRNA_E-siliculosus-1a_F_contig131.1886.1|Name=mRNA_E-siliculosus-1a_F_contig131.1886.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6798bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig131:49452..56249- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig131:49452..56249- >mRNA_E-siliculosus-1a_F_contig131.1886.1 ID=mRNA_E-siliculosus-1a_F_contig131.1886.1|Name=mRNA_E-siliculosus-1a_F_contig131.1886.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3786bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig131:49452..56249- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |