mRNA_E-siliculosus-1a_F_contig13098.1881.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: D7G248_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G248_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.190e-68 Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAVRLSL 453
ND+VFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEV A V+P V L L
Sbjct: 346 NDQVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEV-CAKVLPTVMLCL 474
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A835ZEQ5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ5_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.320e-50 Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAAC 387
N ++F+PLCAGFTDAAA LRELTLKSMV FT +LS+KNMNDKLI+HLARLQGD EDSIRTN IIFLGK+A +L PAVRDKVLLPAFARG++DPF A RLAGLRATAAC
Sbjct: 390 NARLFDPLCAGFTDAAAQLRELTLKSMVVFTDKLSDKNMNDKLIRHLARLQGDPEDSIRTNTIIFLGKIAGKLKPAVRDKVLLPAFARGIRDPFPAARLAGLRATAAC 497
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A7S2U6Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6Q9_9STRA) HSP 1 Score: 135 bits (339), Expect = 7.880e-34 Identity = 72/133 (54.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 52 QLPP---NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
QL P N VFEP+C+GF+D+AA LRELTLKS + LS N+ +KL+++L RLQGDAE SIRTN +IF+GK+A+ LS R +++LPAF R +KDPF RLA LRA C +FR ++V AA V+P V
Sbjct: 409 QLTPAKLNSAVFEPMCSGFSDSAAQLRELTLKSTIVLVPHLSPANL-EKLVRYLVRLQGDAESSIRTNTVIFIGKIASHLSDTSRQRLILPAFTRAMKDPFTPCRLAALRAVLHCRVYFRPKDV-AAKVLPCV 539
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A7S2EPS3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EPS3_TRICV) HSP 1 Score: 128 bits (321), Expect = 1.740e-33 Identity = 70/126 (55.56%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
N VFEP+C+GF+D++APLRELTLKS V LS N+ +KL ++L RLQ D E SIRTN +IF+GK+A QL VR K++LPAFAR +KD F RLA LRA AC F +V A V+PAV
Sbjct: 43 NASVFEPMCSGFSDSSAPLRELTLKSTVVLVPHLSPANL-EKLTRYLVRLQSDPESSIRTNTVIFIGKIAPQLGDVVRSKLILPAFARAMKDEFPPCRLAALRAVRACKGLFSPGDV-AGKVLPAV 166
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A7S2PSF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSF7_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.270e-32 Identity = 67/126 (53.17%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
N VFEP+C+GFTD++ PLRELTLKS + +L+ N+ +KL+++L RLQ D E SIRTN +IF+GKVA L+ R K++LPAF R +KDPF RLA LRA AC ++F +EV A V+P V
Sbjct: 452 NSSVFEPMCSGFTDSSGPLRELTLKSTIVLVPKLNHANL-EKLVRYLVRLQADPEASIRTNTVIFIGKVAPHLTETSRQKLILPAFTRSMKDPFTPCRLAALRAVIACKEYFSQKEV-AEKVLPCV 575
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A7S3XI66_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XI66_HETAK) HSP 1 Score: 122 bits (306), Expect = 4.750e-31 Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLR 372
N +F+ +C GF D + +RE+TLKSM+ F LS+KN+NDKL+K+L+RLQGD E +RTNA I LGKVA +LS RDKVL+PA RG++DPF R+A +R
Sbjct: 173 NGSIFDQVCMGFQDNSPAMREVTLKSMIHFVDHLSDKNLNDKLVKYLSRLQGDTEAGLRTNATILLGKVAGRLSEKTRDKVLVPALIRGLRDPFPHARMAAVR 275
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: B8C7X9_THAPS (Protein kinase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7X9_THAPS) HSP 1 Score: 124 bits (312), Expect = 4.500e-30 Identity = 61/126 (48.41%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
N VF+P+C+GFTD++ PLRELTLKS + +L+ ++ +KL+++L RLQ D E SIRTN +IF+GKVA L+ R K++LPAF R +KDPF RL+ L+A +C Q+F ++V A V+P++
Sbjct: 460 NSSVFDPMCSGFTDSSGPLRELTLKSTIVLVPKLNHASL-EKLVRYLVRLQADPEASIRTNTVIFIGKVAPNLTDMSRQKLILPAFTRAMKDPFTPCRLSALKAVISCKQYFTQKDV-AEKVLPSI 583
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: K0TA70_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TA70_THAOC) HSP 1 Score: 124 bits (310), Expect = 8.060e-30 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 64 NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
N VFEP+C+GFTD++ PLRELTLKS V +L+ N+ +KL ++L R+Q D E SIRTN +IF+GK+A L+ R K++LPAF R +KDPF RL+ LRA +C ++F +V A V+P+V
Sbjct: 519 NASVFEPMCSGFTDSSGPLRELTLKSTVVLVPKLNPTNL-EKLTRYLVRMQADPEASIRTNTVIFIGKIAPNLTEMSRQKLILPAFTRAMKDPFTPCRLSALRAVISCKEYFSQRDV-ADKVLPSV 642
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: A0A7S2EMU2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EMU2_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.850e-28 Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 1
Query: 4 RSALPLMGMICRYYLYQLPPNDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQGDAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
R AL + +L N VFEP+C+GFTD++ PLRELTLKS + L+ N+ +KL ++L RLQ DA+ SIRTN +IF+GK+A +L+ + K++LPAF R +KD F RLA LRA +C +F ++ + A +V+P V
Sbjct: 436 RGALLARTSLLAAHLDAAALNKSVFEPMCSGFTDSSGPLRELTLKSSICLVSHLTPANL-EKLTRYLVRLQSDADASIRTNTVIFIGKIAPKLTEVSQGKLVLPAFTRALKDNFNPCRLAALRAVLSCKDYFDSKTL-AESVLPCV 579
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Match: UPI00142594BF (N-terminal kinase-like protein isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142594BF) HSP 1 Score: 110 bits (276), Expect = 3.220e-25 Identity = 59/150 (39.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 1 RRSALPLMGMICRYYLYQLPP--NDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEKNMNDKLIKHLARLQG-DAEDSIRTNAIIFLGKVAAQLSPAVRDKVLLPAFARGVKDPFVATRLAGLRATAACHQHFRAEEVGAATVVPAV 441
R + + L+ + + Y P ND++F +C GF D +RE T+K+M+ +LS+ N+N +++KH ARLQ D++ IRTN + LGK+A L+P R KVLL AF R +KDPF +R+AG+ A CH F + A ++PA+
Sbjct: 362 RATRIKLLQQLESFIEYIQPAVVNDQIFPHICHGFMDTNPAIRESTVKAMILLAPKLSDHNLNVEVMKHFARLQSKDSQGGIRTNTTVCLGKIACYLNPTTRQKVLLSAFTRAMKDPFPPSRIAGVMAMHTCHNFFAVRDT-ALRILPAM 510 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13098.1881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig13098.1881.1 >prot_E-siliculosus-1a_F_contig13098.1881.1 ID=prot_E-siliculosus-1a_F_contig13098.1881.1|Name=mRNA_E-siliculosus-1a_F_contig13098.1881.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=154bp MGMICRYYLYQLPPNDKVFEPLCAGFTDAAAPLRELTLKSMVAFTQQLSEback to top mRNA from alignment at E-siliculosus-1a_F_contig13098:455..1294- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig13098.1881.1 ID=mRNA_E-siliculosus-1a_F_contig13098.1881.1|Name=mRNA_E-siliculosus-1a_F_contig13098.1881.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13098:455..1294- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13098:455..1294- >mRNA_E-siliculosus-1a_F_contig13098.1881.1 ID=mRNA_E-siliculosus-1a_F_contig13098.1881.1|Name=mRNA_E-siliculosus-1a_F_contig13098.1881.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=924bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13098:455..1294- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |