mRNA_E-siliculosus-1a_F_contig1308.1871.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1308.1871.1
Unique NamemRNA_E-siliculosus-1a_F_contig1308.1871.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: A0A6H5JRU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU7_9PHAE)

HSP 1 Score: 757 bits (1954), Expect = 1.810e-267
Identity = 382/419 (91.17%), Postives = 391/419 (93.32%), Query Frame = 2 
Query:  233 MSSARRRLVWATGLTIVVLSWSRHNFKEGKRIGGTSMRSPGDHDGNNNDGRTQRTELRGVPMSDCASCGRDRGQWDEGDEQQHRHQSDTGGGLVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQAFDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSDARPFCNQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAMLGGHAKAKHTMSMLDRGKFPVNCISSSPGAERRTGRGNGGGGDGLT-SPESSEELYRRLHSCDGRPR 1486
            MSSARRRLVWATGLTIVVLSWSRHNFK GKRIGGTSMRSP D D N  DG TQRT+LRGVP+SDCAS GRDRGQWDEGDEQQHRH+SDTGGGLVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQ+FDISLRHVTPYTPY VLEELVP AAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAG+VPQ DARPFCNQLAWLMSGRDVDFTKI DAEKARRVASEV+EEAER GVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAA TNNKC+SAIRGCNLVDEVLYEHYER FE LVRALPSRTSERVAAMLGGH KAKH MSMLDRGKFPVNCIS SPGAERRT RGNG      + SPESSEELYR LHSC+GRPR
Sbjct:    1 MSSARRRLVWATGLTIVVLSWSRHNFKGGKRIGGTSMRSPRDDDSNYYDGSTQRTQLRGVPVSDCASFGRDRGQWDEGDEQQHRHRSDTGGGLVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQSFDISLRHVTPYTPYDVLEELVPGAAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGKVPQGDARPFCNQLAWLMSGRDVDFTKIADAEKARRVASEVIEEAERRGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAADTNNKCVSAIRGCNLVDEVLYEHYERHFEILVRALPSRTSERVAAMLGGHPKAKHAMSMLDRGKFPVNCISGSPGAERRTERGNGXXXXXXSASPESSEELYRCLHSCNGRPR 419
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: A0A8J2WZM9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZM9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.950e-45
Identity = 103/296 (34.80%), Postives = 155/296 (52.36%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQAFDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGDIKKKYK-TPQALVTEIRAGRVPQSDARPFCNQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLV--RALPSRTSERVAAMLGGHAKAKHTMSMLDRGKFPVNCISSSPGAERR 1387
            +V +K++KTGSTT++ ++AQ+G++R  + LHP  +G F  GEL+ R D G+ FD+S RH TP      L  LVP A + TIMR P  RF+S   F   + ++++    ALV  I+  R+P  DA  FCN +AW++SG        V  E+    A+ +    + H  +VL+ + MS S+A+LA  + WD+      + S RV    RG   C  A     C +A+  CN  D  LYE YER+F+  +  RA   R      A++   A+     +     K+P+NC   + G   R
Sbjct:   82 VVFVKTYKTGSTTVSEFLAQIGYERGLHALHPSESGHFKAGELKRRADRGERFDLSFRHPTPTLDVLSLGRLVPNARWCTIMREPVSRFVSTMRFVRRLDERFRGNAAALVDSIQKKRLPDGDANTFCNNVAWVLSGEQRTLAYGVSREEQLAAAAAITARLDAHETLVLMQKDMSASLALLASSLNWDLAASPARLRSARVARGRRGAARCEDAA----CRNAVLACNAADSQLYETYERRFDAEIARRAGDERFRANRRAVVAAPARNAPPFAS----KYPINCQQPNTGPPER 369
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: D7FID6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 7.650e-26
Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 2 
Query:  980 MEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRG 1186
            MEEAER GVVVLITERMSESV +LAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAA T     +   G
Sbjct:    1 MEEAERRGVVVLITERMSESVDILAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAADTTASASAPSEG 69
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: A0A7S2STP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STP4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.030e-16
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQAFDISLRHVTPYTPYGVLEELVPAAAFVTIMRRP 763
            LV IK++K+GSTT+A ++  V +Q+    LHP A GWF  GEL  R   G+ +D+S RH+TP+  Y  L  L+P A +V+I+R P
Sbjct:   52 LVFIKTYKSGSTTVAKFLNAVAYQKELTMLHPLAQGWFQNGELVRRGKAGERYDMSFRHITPHVDYPALGVLLPNAHYVSILREP 136
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: UPI00189C4D0B (galactose-3-O-sulfotransferase 4-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189C4D0B)

HSP 1 Score: 72.8 bits (177), Expect = 5.610e-10
Identity = 70/274 (25.55%), Postives = 125/274 (45.62%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRR--DEGQAFDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGDIKKKYKTP----------QALVTEIRAGRVPQSDARPFCNQLAWLMSGRDVDFT-KIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAML 1291
            +  +K+ K  S+++   + + G +RR  F  P    + G  +L +R   +    FD+ + H T +        L P   FVTI+R PA  F SLF++ GD+K+                + V ++RA     +  R   NQ+++     D+ F  ++   E A R   E M+       +V++ ERM+ES+ +L HL+ W+MD + +   ++R  D               + ++ +R  N VD +LY ++ ++FE  V A      +R   +L
Sbjct:   32 VCFLKTHKCASSSVQNLLMRFGERRRLTFALPWFDIYLGHTDLLNRTMVEGTPPFDMLVHH-TRFQEDEARALLKPDVVFVTIVREPASLFESLFSY-GDLKEHVNVSLEELQRATENASFVKQMRAILPGPNRKRLGLNQMSF-----DLGFNLELSHNESAVRGFIERMDAVFD---LVMVAERMNESLVLLRHLLCWEMDDVVVFKHNRRKGDFRHSL--------TKQLVAELRALNSVDTLLYTYFTQRFEQRVEAFGRERMQREVQLL 287
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: G3MI88_AMBMU (Uncharacterized protein (Fragment) n=1 Tax=Amblyomma maculatum TaxID=34609 RepID=G3MI88_AMBMU)

HSP 1 Score: 73.2 bits (178), Expect = 1.060e-9
Identity = 70/306 (22.88%), Postives = 136/306 (44.44%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQA--FDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSD--------ARPFCNQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAMLGGHAKAKHTMSMLDRGK--FPVNCISSSPGAERRT 1390
            +  +K+ K  S+++   + + G  R   F+ P    + G   L +R   G    FD+ + H   ++   +   L PAAAFVTI+R PA  F SL+++ G   + + T    + E+ AG    ++        ++   NQ+++ +      F    +A   RR    + +  +    +V++ ER++ES+ ++ HL+ WD+D + +   + R ++  R   +   A       + +R  N  D  LYE++ R+FE  V A              G  +  H + +L+     +   C+  +P  + +T
Sbjct:  164 VCFVKTHKCASSSVQNVLLRYGESRGLRFVLPARNNYLGHPRLFNRSMAGTPTPFDLLVHHAR-FSEAEMRAVLRPAAAFVTIVREPASLFESLYSYYGFGTRTHLT----LEELGAGGASLAERLSRERTRSKLGLNQMSFDLGLEPALFG---NASAVRRFVEHLDDAFD----LVMVAERINESLVLMRHLLCWDVDDVVVFKHNAR-KNTYRSQLNASLA-------AQLRVLNAADVQLYEYFARRFEQRVEAF-------------GRRRMAHELRLLEERTQHWYQRCVEDTPQTDSKT 436
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: A0A023GEP6_AMBTT (Putative galactose-3-o-sulfotransferase ixodes scapularis galactose-3-o-sulfotransferase (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GEP6_AMBTT)

HSP 1 Score: 70.9 bits (172), Expect = 3.240e-9
Identity = 65/262 (24.81%), Postives = 119/262 (45.42%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQA--FDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSD--------ARPFCNQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSR 1264
            +  +K+ K  S+++   + + G  R   F+ P    + G   L +R   G    FD+ + H   ++   +   L PAAAFVTI+R PA  F SL+++ G   +   T    + E+ AG    ++        ++   NQ+++ +      F    +A   RR    + +  +    +V++ ER++ES+ ++ HL+ WD+D + +   + R         S   +  N    + +R  N  D  LYE++ R+FE  V A   R
Sbjct:  115 VCFVKTHKCASSSVQNVLLRYGESRGLRFVLPARNNYLGHPRLFNRSMAGTPTPFDLLVHHAR-FSEAEMRAVLRPAAAFVTIVREPASLFESLYSYYGFGTRTRLT----LEELGAGGASLAERLSRKRTRSKLGLNQMSFDLGLEPALFG---NASAVRRFVERLDDAFD----LVMVAERINESLVLMRHLLCWDVDDVVVFKHNARK--------STYRSQLNASLAAQLRVLNAADVQLYEYFARRFEQRVEAFGRR 356
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: UPI001C714605 (galactosylceramide sulfotransferase-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C714605)

HSP 1 Score: 71.2 bits (173), Expect = 3.850e-9
Identity = 60/273 (21.98%), Postives = 119/273 (43.59%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRD-----EGQAFDISLRHVTPYTPYGVLEELVPA-AAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSDARPFCNQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDM-DTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAMLGGHAK 1306
            +  +K+ K  S+ +   + + G+    +F  P    +FG G +  + D           +++  +     Y  +  ++P    +++++R PAE F S+F +    +K YK       E       +       NQ+ W       DF    +A      A  ++E+A++   +V++ ERM ES+ +L+H + WD+ D + L V ++  +     + +  +A T     + +R     D +LYEH+ ++F+ LV        +R  A L  H +
Sbjct:   70 IAFLKTHKCASSAIQNILFRYGYAHNLHFALPDHGNYFG-GPVSFKADMLRLSPWYKLGVNIFAIHTKWDYEQVRAVMPNDTVYISVVREPAELFESMFTY-AKFEKVYKKDLKTFVETEEADGERFQKYLGFNQMVW-------DFGLPSEAMTDLDAAQRMIEDADKQFGLVMVAERMDESLVLLSHFLCWDLRDVVVLKVNARSSK-----FKTSLSAETQ----ATLRNKLAPDYLLYEHFAKKFDQLVNLFGRERMDREVARLRSHTE 324
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: UPI001FB5D830 (galactosylceramide sulfotransferase-like n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB5D830)

HSP 1 Score: 69.7 bits (169), Expect = 6.630e-9
Identity = 66/281 (23.49%), Postives = 127/281 (45.20%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQAFDISLRHVTPYTPYGV-------------LEELVPA-AAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSDARPFC--NQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDM-DTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAMLGGH 1300
            +  +K+ K  S+ +   + + G+    +F  P+   + G G++         F+  +   TP+   GV             ++ ++P    +++I+R P+E+F SLF +  D +K YK  ++L   +++  V       +   NQ+AW       DF    +A K       ++++A+    +V++TERM ES+ +L+H + WD+ D + L V ++      +   S     T  + ++        D +LYEH+ R+F+ LV        +R  A L  H
Sbjct:   69 IAFLKTHKCASSAVQNILFRYGYTHGLHFALPETGNYIG-GKV--------TFNADMVRNTPWYKLGVNIFAIHTKWDYEQVKSVMPNDTVYLSIVREPSEQFESLFTYT-DFEKFYK--KSLEEFVQSEDVDGDRFSKYLGYNQMAW-------DFGLPREAMKDLDAVQRMVDKADEQFGLVMVTERMDESLVLLSHFLCWDLSDVVVLKVNAR--SSTFKTSLSAETQATLKRKLAP-------DYLLYEHFLRKFDRLVELFGRERMDREVAKLRNH 321
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Match: UPI0018A79C27 (galactose-3-O-sulfotransferase 4-like isoform X1 n=2 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A79C27)

HSP 1 Score: 70.5 bits (171), Expect = 7.060e-9
Identity = 67/281 (23.84%), Postives = 125/281 (44.48%), Query Frame = 2 
Query:  509 LVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRDEGQAFDISLRHVTPYTPYGV-------------LEELVPA-AAFVTIMRRPAERFLSLFNFRGDIKKKYKTPQALVTEIRAGRVPQSDARPFC--NQLAWLMSGRDVDFTKIVDAEKARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDM-DTIELNVGSQRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRALPSRTSERVAAMLGGH 1300
            +  +K+ K  S+ +   + + G+     F  P    +FG G +        AFD  +  +TP+   GV             ++ ++P    +++I+R P+E F SL+ +  + +K YK  + L   + +  V  +  R +   NQ+AW       DF    +A K       +++ A+    +V++TERM ES+ +L+H + WD+ D + L V ++      R   S     T  + ++        D +LY+H+ R+F+ LV        ++  A L  H
Sbjct:   92 VAFLKTHKCASSAVQNILFRYGYAHGLRFALPDYGNYFG-GPV--------AFDADMVRLTPWYGLGVNIFAIHTKWDFEQVKSVMPNDTVYISIIREPSELFESLYTY-AEFEKFYK--KTLEEFVESEDVDGTRYRKYLWYNQMAW-------DFGLPAEAMKDLDAVQRLVDMADEQFGLVMVTERMDESLVLLSHFLCWDLSDVVVLKVNAR--SSKFRTNLSAETQATLKRKLAP-------DYLLYDHFVRKFDRLVELFGRERMDKEVAKLRNH 344
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRU7_9PHAE1.810e-26791.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2WZM9_9STRA1.950e-4534.80Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D7FID6_ECTSI7.650e-2681.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2STP4_9STRA1.030e-1645.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI00189C4D0B5.610e-1025.55galactose-3-O-sulfotransferase 4-like n=1 Tax=Derm... [more]
G3MI88_AMBMU1.060e-922.88Uncharacterized protein (Fragment) n=1 Tax=Amblyom... [more]
A0A023GEP6_AMBTT3.240e-924.81Putative galactose-3-o-sulfotransferase ixodes sca... [more]
UPI001C7146053.850e-921.98galactosylceramide sulfotransferase-like n=1 Tax=P... [more]
UPI001FB5D8306.630e-923.49galactosylceramide sulfotransferase-like n=1 Tax=P... [more]
UPI0018A79C277.060e-923.84galactose-3-O-sulfotransferase 4-like isoform X1 n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1308contigE-siliculosus-1a_F_contig1308:11519..19325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1437
Model size2637
Exons10
Ec32 orthologEc-11_001430.1
Ec32 ortholog descriptionGalactose-3-O-sulfotransferase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko01002,ko03009,ko03041,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EC2.1.1.181,3.4.19.12
EggNOG OGsCOG3129@1,COG5077@1,KOG1866@2759,KOG2912@2759
EggNOG free text desc.23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GOsGO:0000154,GO:0000226,GO:0001510,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008174,GO:0008649,GO:0008757,GO:0008988,GO:0009056,GO:0009057,GO:0009451,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016422,GO:0016433,GO:0016556,GO:0016740,GO:0016741,GO:0017069,GO:0017070,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0022402,GO:0022613,GO:0030629,GO:0031023,GO:0031167,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032259,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0034248,GO:0034249,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035613,GO:0040025,GO:0040031,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043484,GO:0043487,GO:0043488,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045935,GO:0046483,GO:0046700,GO:0048024,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048569,GO:0048731,GO:0048856,GO:0050684,GO:0050779,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0052907,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0065007,GO:0065008,GO:0070475,GO:0071704,GO:0071840,GO:0080009,GO:0080090,GO:0090304,GO:0097159,GO:0120048,GO:0120049,GO:0140098,GO:0140102,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1903311,GO:1903313,GO:2000112,GO:2000113
KEGG ReactionR07232
KEGG koko:K06970,ko:K11393,ko:K11840,ko:K11853,ko:K11869,ko:K13119
KEGG rclassRC00003,RC00335
Preferred nameMETTL16
Seed eggNOG ortholog44056.XP_009034943.1
Seed ortholog evalue5.8e-35
Seed ortholog score155.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1308.1871.1prot_E-siliculosus-1a_F_contig1308.1871.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1308 11571..18177 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927829.4237516-UTR-E-siliculosus-1a_F_contig1308:11518..115701622927829.4237516-UTR-E-siliculosus-1a_F_contig1308:11518..11570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1308 11519..11570 +
1696318697.8518395-UTR-E-siliculosus-1a_F_contig1308:11518..115701696318697.8518395-UTR-E-siliculosus-1a_F_contig1308:11518..11570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1308 11519..11570 +
1622927829.825044-UTR-E-siliculosus-1a_F_contig1308:18177..193251622927829.825044-UTR-E-siliculosus-1a_F_contig1308:18177..19325Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1308 18178..19325 +
1696318697.9465976-UTR-E-siliculosus-1a_F_contig1308:18177..193251696318697.9465976-UTR-E-siliculosus-1a_F_contig1308:18177..19325Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1308 18178..19325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927829.4362822-CDS-E-siliculosus-1a_F_contig1308:11570..116711622927829.4362822-CDS-E-siliculosus-1a_F_contig1308:11570..11671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 11571..11671 +
1696318697.861556-CDS-E-siliculosus-1a_F_contig1308:11570..116711696318697.861556-CDS-E-siliculosus-1a_F_contig1308:11570..11671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 11571..11671 +
1622927829.4485652-CDS-E-siliculosus-1a_F_contig1308:11883..119861622927829.4485652-CDS-E-siliculosus-1a_F_contig1308:11883..11986Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 11884..11986 +
1696318697.8687005-CDS-E-siliculosus-1a_F_contig1308:11883..119861696318697.8687005-CDS-E-siliculosus-1a_F_contig1308:11883..11986Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 11884..11986 +
1622927829.4638746-CDS-E-siliculosus-1a_F_contig1308:12289..123751622927829.4638746-CDS-E-siliculosus-1a_F_contig1308:12289..12375Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 12290..12375 +
1696318697.875926-CDS-E-siliculosus-1a_F_contig1308:12289..123751696318697.875926-CDS-E-siliculosus-1a_F_contig1308:12289..12375Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 12290..12375 +
1622927829.4735408-CDS-E-siliculosus-1a_F_contig1308:12891..131171622927829.4735408-CDS-E-siliculosus-1a_F_contig1308:12891..13117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 12892..13117 +
1696318697.883433-CDS-E-siliculosus-1a_F_contig1308:12891..131171696318697.883433-CDS-E-siliculosus-1a_F_contig1308:12891..13117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 12892..13117 +
1622927829.4836953-CDS-E-siliculosus-1a_F_contig1308:13982..142341622927829.4836953-CDS-E-siliculosus-1a_F_contig1308:13982..14234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 13983..14234 +
1696318697.8909996-CDS-E-siliculosus-1a_F_contig1308:13982..142341696318697.8909996-CDS-E-siliculosus-1a_F_contig1308:13982..14234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 13983..14234 +
1622927829.4937377-CDS-E-siliculosus-1a_F_contig1308:15240..153831622927829.4937377-CDS-E-siliculosus-1a_F_contig1308:15240..15383Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 15241..15383 +
1696318697.8987079-CDS-E-siliculosus-1a_F_contig1308:15240..153831696318697.8987079-CDS-E-siliculosus-1a_F_contig1308:15240..15383Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 15241..15383 +
1622927829.506798-CDS-E-siliculosus-1a_F_contig1308:16328..164161622927829.506798-CDS-E-siliculosus-1a_F_contig1308:16328..16416Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 16329..16416 +
1696318697.9064727-CDS-E-siliculosus-1a_F_contig1308:16328..164161696318697.9064727-CDS-E-siliculosus-1a_F_contig1308:16328..16416Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 16329..16416 +
1622927829.5193634-CDS-E-siliculosus-1a_F_contig1308:16642..167731622927829.5193634-CDS-E-siliculosus-1a_F_contig1308:16642..16773Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 16643..16773 +
1696318697.9226153-CDS-E-siliculosus-1a_F_contig1308:16642..167731696318697.9226153-CDS-E-siliculosus-1a_F_contig1308:16642..16773Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 16643..16773 +
1622927829.530362-CDS-E-siliculosus-1a_F_contig1308:17481..176111622927829.530362-CDS-E-siliculosus-1a_F_contig1308:17481..17611Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 17482..17611 +
1696318697.9311175-CDS-E-siliculosus-1a_F_contig1308:17481..176111696318697.9311175-CDS-E-siliculosus-1a_F_contig1308:17481..17611Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 17482..17611 +
1622927829.8125541-CDS-E-siliculosus-1a_F_contig1308:18000..181771622927829.8125541-CDS-E-siliculosus-1a_F_contig1308:18000..18177Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 18001..18177 +
1696318697.9386528-CDS-E-siliculosus-1a_F_contig1308:18000..181771696318697.9386528-CDS-E-siliculosus-1a_F_contig1308:18000..18177Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1308 18001..18177 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1308.1871.1

>prot_E-siliculosus-1a_F_contig1308.1871.1 ID=prot_E-siliculosus-1a_F_contig1308.1871.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1871.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=479bp
MFFTAAAVDDGITFLSLDACPPGAFWMKQCASPRTCARGLLEGLQWATTK
GRPMPAREARMSSARRRLVWATGLTIVVLSWSRHNFKEGKRIGGTSMRSP
GDHDGNNNDGRTQRTELRGVPMSDCASCGRDRGQWDEGDEQQHRHQSDTG
GGLVLIKSFKTGSTTLATYIAQVGHQRRSYFLHPKATGWFGRGELESRRD
EGQAFDISLRHVTPYTPYGVLEELVPAAAFVTIMRRPAERFLSLFNFRGD
IKKKYKTPQALVTEIRAGRVPQSDARPFCNQLAWLMSGRDVDFTKIVDAE
KARRVASEVMEEAERHGVVVLITERMSESVAVLAHLMQWDMDTIELNVGS
QRVQDAGRGYFSCPAAGTNNKCMSAIRGCNLVDEVLYEHYERQFETLVRA
LPSRTSERVAAMLGGHAKAKHTMSMLDRGKFPVNCISSSPGAERRTGRGN
GGGGDGLTSPESSEELYRRLHSCDGRPR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1308:11519..19325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1308.1871.1 ID=mRNA_E-siliculosus-1a_F_contig1308.1871.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1871.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7807bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1308:11519..19325+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATCGTGGGCCCCCTCCCTGTTCTCCGAAGATCAGCAGATTCAAAAATCGG
AGATGTTCTTTACTGCTGCTGCTGTTGATGATGGCATCACCTTCCTCTCC
CTGGACGCTTGTCCGCCAGGCGCTTTTTGGATGAAGCAATGTGCCAGCCC
CAGGTACCCACGTGAGAGAAAGAGACCCCTATCTCCTCGGTTGGTTAATA
AAATATGCATGGTATCTTTTTTGGACGCACAAGACAAGACGGCGGGGGGG
ACTTCGAACAAAAATGGAGAACGCTTGAGGGATACCCCCCGTAGTACCCC
TGCCCCTCTCTCGCGTTGCCCCCCCACCTTGCTCGCAATTGCTCGTTCGT
TGCTCCTTGTGCAAGAACGTGTGCGCGAGGGCTGCTGGAAGGGCTGCAGT
GGGCGACAACGAAGGGAAGACCAATGCCGGCAAGGGAGGCGCGTATGTCG
TCGGCCCGCAGGCGCCTGGTGAGCGAAACGCGATCCCCATTCTCGTCTAT
GAACACCGTCCGTCGATAGGCACACAGCAGCAGCAGTACCACCGCGGTAA
CGGCCGGCGGCCAAACCACCACTGCTGTGCACAGCCTTGCAGGTTGGCTA
TTGGCTGCCGATCAAGCGGCCACGACCAGCGGTGCGCGGAGGCACCCCAC
CTGTACAGATATGCTATGTGCTAATGGTACCTTTGGGCGTTAGACCTGCG
TAGCGGGTCTGGTTTACGACGCAGGCGTTCATCCTGTGAGCGTTTGCGAT
CGGTGTGCGCATCATGCTCAGGTCTGGGCAACAGGGTTGACCATCGTCGT
ACTCTCGTGGTCACGACACAACTTCAAGGAGGGCAAGCGCATCGGCGGGA
CAAGCATGTGAGCGGAAATGTCATTCCCCATTGGTTCCGCCGATTCCCAG
ACAATATCTGCTGTAAGGACAAACTTGGGGTCATCTCAGCATGATGTACT
ATTATACAGCTGTGAGGTGCGGAGTATCTCCAACTTGAAACTCGAGCAGT
TTCCTCAACGACAGCAGCAAGGAGGGGGAGTGACGTTGTTGTGTGATGTC
GCCGTACTGTAGGCACATCTGGGTGTTCGAGGCACGTTTATCGGATGCTT
CAGCTGCCGAGGGTTGGATACGTAAGACGCGTATGACGGAAGGGAGTATA
AAACGCTGCCTCCAGGAGCGAGAACGCGCTTTGCGTCTCTCTGCCGAGCA
TAGGATAAGCCGGTCGGACGGGATGAATCCATGATGTGTGTGTGCGGCAA
TGAAAGATCTTCCAGTGTACTGGGGTACTGCTGTACTACGTGCAATTTGA
CCCTATCACTTCGTTTCACGACGACTAAGTTTCGCGCTGTTGTGTTCTGC
GGCACACGGCCTATATGGTCCAGGAGGTCTCCCGGCGACCATGACGGTAA
CAACAACGACGGAAGAACCCAACGTACCGAGCTCCGAGGAGTTCCGATGA
GCGACTGCGCATCTTGTGGTCGAGATCGCGGCCAGTGGGATGAAGGTGAT
GAGCAGCAGCACCGCCATCAGAGTGACACGGGTGGTGGATTGGTGTTGAT
CAAATCCTTCAAGACAGGGAGCACCACACTGGCGACCTACATTGCACAGG
TGTGTTGACCACCGTTGTTTCTGAATGACCGGATATGCCTGTGTGCGCAT
GCTTGCTTTTTCAGTTATGTAATACCTGCCATCCTCTCTCTTTGCAGCAA
CACCCGCTACGTGGCTTACCGTTGTTTGACATGTATGGCGGGGTGCTACG
TAGATACATCGTTTTTGCCCAGCATCTGTTTTTGCTAGTCAAACAGAAGA
CGACTGGGAACGAGAGGCACGCGCATCGGGGGCGATGCGCTCTCACGTGT
GCGTCTATTAAGTCAATGCACACGCGCCCCTGTATACTTTTGTGCGAGCG
AGTTGGAGAGATGAAGCACCACGTTCGTTTTCGACACGGGTACCCGGCAC
ATATATGGATGATCTCCGACACAAATATATTCGGACGAGACGATATCTCT
GCTGTACAGTATTTAACACTCATATATGCTGGTGTGTACGTTGTCACGTT
AGCAACGAGTTGGAGAGAGGGAAATGTGCGCACGTGTTGAGGGTTTAATC
CTCTCCATGCCACGGTGCGTGCCCCAGCTGTAAGTGCTTTTCCCGAGCCA
GTCCGATCATTGGGTACTACCACGCAGATAATCCACACAGATTCATGGTT
ATTCGGCGCATGCGCTAGAAACTTGGACCGACTGCTGCATTGCACCCTTT
GGCCCCTACTCCTGCTGTGTAGTCCACTGGCGTGACAGCAGCATGGGGTG
GCGGGGGCGCCCCCTAGCACAATTCATGGAACGAATGGCCCCCACAGCCC
CTTCGCGCTGGCGCCATCTCTTCTTCGCGCTCGGCCCTCTTCTTCAGTCC
CGGACACTAGATAGCAACAACCGTCTGCTCGGGTACTCTTGCTGCCGCCA
ATCCGTGTCGTTAGGTTGGCCACCAGAGACGCTCCTACTTCTTGCACCCC
AAGGCCACCGGCTGGTTCGGGCGGGGGGAGCTCGAATCCCGGCGCGACGA
GGGCCAGGCGTTCGATATAAGCCTTCGACACGTGACGCCGTACACCCCGT
ACGGCGTGCTGGAGGAGCTGGTGCCCGCGGCGGCCTTCGTGACGATAATG
CGCCGCCCCGCCGAGCGCTTCCTGTCGCTCTTCAACTTCCGGGGGGATAT
CAAGAAGAAATACAAGGTGCGCCGGCCGGCCGGCAATACCGAGTAGTTTA
GGGCCACCGGATTTACTGCAGACCGGTAATTCTGCTTTCTGCCATCTTCC
CACGTACGAACCTACCATCGTTTAGACCGTTTTTTTTCTCTGCTTTCTGC
ATTCTGCCGTCTTCCCAGGTACGAACCATTGCTTATTACCGTTTTTCATC
CCTACCAGGTGGTCTCGCCCTCTCAAACCGAAGGGCTCCGGGTCACGCAC
GGAAAGAAGTCCTCTGGCTTCCATTCGTTCTTTACCTATGGCGAGAAGGG
CTTAGCCACCATTCCTCCCCTGAAAAATTCATTCTCACGAACGAACGCTC
CAGTCTACAAAAGCGCTTCGCCCGTTGCTCCGCAGTTTCAGAGACACCGA
AACATTCGGTACAATGCGGGAACCCCTCATCTTCGAGAGCCTCAAAATCC
CGTGCACGCACACAAACGTTCTTGGGGCGTGCTACTGTAACCAGCGGCAG
ATCTGGACGGCATGGCGATCCGATGCGAAATGTTTTCATGTGTACAGATA
GCACCCGCATGTAACGAGCTATCTCTCTAGGTAGTATTGGGCGAGGCTGG
GGTTGCTACTGTTGTTCCGTGGGTTATGTTGCAAATTTCAACTAATTGGT
TTTATTGTAGAGATTCTTGCCCGGGCTCACAAATGGCGTTCAAGCTCTTC
TGTTTTGGGTTTTTCGAGGCTATTTTATTTTGAGTTTTTTCCAGGCTACA
ATGTATCAAGTTCTTTGCTGCCAAGTTCTTAAGTGCGGGGGCTAGCTGTA
CCGCGCCATTCTTGGCTTTTTTCGCGCTGTACATGACTTGCGGAGAGGCG
TCGACGTTCTACTTCTCGGGCGTACGCAGCACGCCACAGGCGCACGTGCG
CTGCTAACGTGTGGTTCTTCTCTGATGCCTGCCATTGGACATCTTGACCC
TGCCCGCCTGATATCGCCTCAATGCCCCCCCCCCCCCGGATATCACCGCT
GGTGATCGTGCATGATGCCCAGACCCCACAAGCGCTGGTGACCGAGATCC
GGGCCGGAAGAGTGCCTCAAAGTGATGCCCGACCGTTTTGCAATCAGCTC
GCGTGGCTCATGTCCGGGAGGGACGTCGACTTCACCAAGATCGTGGATGC
GGAGAAAGCTCGAAGGTGCGCTATTTCATGCTATACCATGGCACCGAAGA
CTGTATTTTCTGCGTTTTCCGCATGGAGCGCGTGGAATGGACTAAGCCTC
TGGCCATTTCCTGTTTGAACCGACGCAGATATGTCGGTTGTATTTCCCCC
CACGCAAGATAGTACACGAAAGTAGCGCTTCTCATACCCCAACAGCAGTG
GCAGTGTAGGAAACACTGTTTGGACTTGTCGAATGCGGTTTCATTTCGTA
GGAGTCGGCTTTGTACACGTCATGCGTGTGTTCGTTGTAGTCGTTGCTCG
CTACTCAGTTGCTTCGTCGTTGTTTGAGAGACGTCGCGGCCATGGTTTTC
GGGCGTTGTGGCATTGCGACTCGGTCGCGGTGTCCCTGTTGACACAGTTG
CATGGCGTTGCATTTGCCCTGGCGCCGAGCGGTTTGGTGAAGACTACGAC
TCTCGGGTGAACGTCAGTCCTGAACTGTACGGTACTTTTTCGCGCACCTT
GCCTCGCCTGCGCTGCACTGCTGCACGACTCTCGTTGTGTTTCTGCTGCA
TGTTGTCGTCGCACCGTTCTGTAGTATTGGCGAAGTTCGCTACCGCTCTG
TAGTGTGATGGCCGCACCGTCGTTTGTTTCCCCTCAATGTATCTCCACAA
AGCAACTTACAGAACACGTCGCCAAGTATGAACCCCTTTTGTTTTGGGCA
AAACCGTAGCGGCTTGTTTCCTCTGTAAGGAAGCCAACAGGAAATGTATT
GGTTGTAGTGTAGGTCGGGGTCCAAGCTCTTATAACTGCAACGTTTTTAC
CCCTAGAGTTCATGATGTGCCAAGTTCTTGACAGTAGCGACGCGGTCTGG
ACGTAATCGCGCTCGCCTTATGTATCACGAAGCTCCATTTGACCATGGTA
TTGAACGTATCGATGGGTCTTTTACGTCTCGGGAAATGTGGGAAACGGTG
TTCTTGACAGGGTGGCCAGCGAGGTCATGGAGGAGGCTGAGAGACACGGC
GTGGTGGTGCTCATCACGGAAAGGATGTCAGAATCCGTCGCCGTCCTGGT
GGGTCTTTTCATAGAGCTTGCTGTTGTTCTTGTTGTTGTTGTTGTTGGTG
GTGGTGGTGTTGGTGTTGTTATTGTTGTTGTTGTTGTTGTGGTTGCTGTT
CTAGTTATTGTTGTTTGTAGTAGACAGTGGTTGTGGCGTTGTTGCCTCAT
AGCGGGTGCTAAACCAGAACTGTTTTCCTCCTCTCATTTCGAAACACAAC
CGCGGATCGCCGCTCTGCCCTCAGGCGCATCTCATGCAATGGGACATGGA
TACGATCGAGCTCAACGTTGGTTCCCAAAGAGTGCAGGACGCAGGGCGCG
GCTACTTTTCCTGCCCCGCCGCTGGCACCAACAACAAGTGCATGAGCGCC
ATCAGGTGGGCAAAAAAAAGTGCAATGTGGCAGGGTCGGCATCGCACGGT
TTGATCGATCAGCTTTTGCATCATGCCGAAGGCCGTGGTGCCCGATCAAC
CAGCAAGCAGTGTAACAGCGGGACACCCCCGCCGGTGGCCCTGACCCGGT
GGGACGTGACGCCCTTGTTGCTGCTCCCGTGGCCTTGTATGGGGACGGCA
TCGACACCGCCAACACACGCCGCAGCAACAGGTTTTCGTAACCATACACC
CTCCAGCGTGTCGGACGTTGTACTTCCGAACTGGCAGGGAACTATGACCC
GAAGCACAGCTCCGCCCGGTTGATCTAGTTTCGGCAGTACGCAGTACCAC
TCGATAAACACAGCTGGGCGCTCCTGAGTCGACGGTACGCAGTGGTCTAT
CGCCCTACTGTAGGCGCGGTTGACAATGTTGACCTGCTTTGAGTGCGAAA
CTACTCCAGAGTTGGGGCAGAAAATGGAGGTTTTGGCGTTGTTCTCTGTC
TTCGTTTCCTGCCACACATTGGCTCTAGTTCACCCTCATCGATTCTGCTG
CAGGTGACACTGGTATGCTGCGGAGGCACGCCCAGCAGACTGGCGTTTCT
TTGCGACATTGCGCCGTGTCTCGTTGCTTCTTTTTCCCCGCTTCTTTTTA
ATGCCGTCGGTGTTGGTGCTGCGCTGCGGCTGTTTGCCGTTGCTCCTGCT
GTTGCTATTGCAGAGGGTGTAACCTGGTCGACGAGGTGCTGTACGAGCAC
TACGAGCGACAGTTCGAAACCCTAGTGCGCGCGTTGCCTTCACGAACGTC
AGAGCGGGTAGCTGCGATGCTGGGCGGTCATGCCAAGGCCAAGGTGAGCC
CACCACACACAGCACACACTTGCTCCATCCGCGCTGCGCCCTCTTGTGAG
CGATACGCAGCTTCATTGGAAGCTAGCAAGGTAACCTAGTCCCCACCAAG
GCTAGGTCAATATCCGTGGGTACAATTTATTCAAGGGGCAGGGTTCTATC
TGACTGAAGGTGAGCCGGGACCATGCTGAAACTGCAAAGTACAGCGTTCA
CGATTTTGAAAGCCCTCCACCTTGCGGTAGCACTCCATAGTTGTTCTCTT
GCATAGTCACTTGGTTGTCTTACCACAGTGTAGTGAGTAGCTGAAAATCC
TTATCTAGAGGTGTATTCTGTCGAAATTGAGTCGCTTTTTCGCGCTTTTT
CGCCCCTTGCTCTTTACCGCTTGCTTTGGCAGCACACGATGTCAATGTTG
GATCGCGGGAAGTTTCCGGTCAACTGCATCAGCAGCAGCCCCGGAGCGGA
AAGACGCACCGGACGGGGCAACGGTGGCGGGGGCGACGGATTGACATCAC
CCGAATCCAGCGAAGAGCTCTACCGCCGTCTTCACTCGTGCGACGGACGT
CCTCGATGACACCGATGTGGTTCGCAGGGCCCAGCTCGTGCAGGAGGTCT
GTTGCTCGCAACGCCAATCGGCGTGCAATTCTGTACAAACCTGTGCATTG
TAACTTGTGTCTTCTTCAGTTTAGGCTAGACCGGCGCCGACTTCCTTCTA
AAGAGAGATGCCAATGCCGATGGAGACCGCACCACACGCTCCGGTGATGC
GGGGCGATGTGGCCGGGCGTGATTCGGAGGGCCTGGGTCAGGCAGCGTTT
GTGTATACATATGTGTCTACAATTTGTGATGTCCCAGGTGCTGGTTTGCT
CCCCGTATCATGTTGTTCTGTACTCTCGGCAGATGCACCCTTGGCCAGTT
TAGCTTTTTTTGTGTTCGACCGACGAATTATCTTAGGTCGCAGCTTGTCC
AAATTTGTTTGGATCTGTTGCCACGTTTTTCGAGGCGTTGGCGTTGTTTC
CGTTGCATTTGTTGTTTACTTGGTCTTTGTTGTTGTTGTTGTTGTTGTTG
GTGGTGGTGGTGGTGGTGATGTTGTTGTTGGTGGTGGCAGTACTGGTGGT
AATGGTGGCGTCCTCGTTGCGTGGTGACGCTGCTCTAGAAACCTACACGA
TATCGTCTCGGTAGATGTTCCGTTCCTTGTTAATGACGAAGAGATCGAAT
ACCTACCATGGCACACTAGGTGGTACAGATGTGATGTGTTCCGTTCGTTT
TCGATTCATTTTTTTTGTTTTACGTCTGTGCTTGCTACAAGACCTCATAC
GGTGCGTGCACCAAGACCCCGGTGTTTCGGAAGCAATTTCGACTCTTTGG
TTGGCAAGTGGTCGAATCCCGTTCTACCAATTACATATATCTCTTTCAGT
TGCACTCGTCGCGAGCGCGGGAGCAGTCTCGACGCGTGATATATTTACCG
TGGTTGATGTTGGCCGCAGAAGCAAGTCAGCCCCCTTGATCACGCCAGAG
GAGGGTCAAGATCTTGAGATAGCAATTTCAGATACTCACTTCTTGGGTAT
ACATGGGTCTCTCGTTCGCACTTCGTGCGGAGGCAAGAATGCCGGCTAGA
CTAAGGATTTCGTGGTAGACGGCTGCTCAATGCCTTCAACAATTTGCTAA
ACCCGGGTACGTGCCGAACGGGGATTTCAGCGGTGGAAGGGGACGAGGGG
ATCCACG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1308:11519..19325+

>mRNA_E-siliculosus-1a_F_contig1308.1871.1 ID=mRNA_E-siliculosus-1a_F_contig1308.1871.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1871.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2874bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1308:11519..19325+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTCTTTACTGCTGCTGCTGTTGATGATGGCATCACCTTCCTCTCCCT
GGACGCTTGTCCGCCAGGCGCTTTTTGGATGAAGCAATGTGCCAGCCCCA
GATGTTCTTTACTGCTGCTGCTGTTGATGATGGCATCACCTTCCTCTCCC
TGGACGCTTGTCCGCCAGGCGCTTTTTGGATGAAGCAATGTGCCAGCCCC
AGAACGTGTGCGCGAGGGCTGCTGGAAGGGCTGCAGTGGGCGACAACGAA
GGGAAGACCAATGCCGGCAAGGGAGGCGCGTATGTCGTCGGCCCGCAGGC
GCCTGAACGTGTGCGCGAGGGCTGCTGGAAGGGCTGCAGTGGGCGACAAC
GAAGGGAAGACCAATGCCGGCAAGGGAGGCGCGTATGTCGTCGGCCCGCA
GGCGCCTGGTCTGGGCAACAGGGTTGACCATCGTCGTACTCTCGTGGTCA
CGACACAACTTCAAGGAGGGCAAGCGCATCGGCGGGACAAGCATGTCTGG
GCAACAGGGTTGACCATCGTCGTACTCTCGTGGTCACGACACAACTTCAA
GGAGGGCAAGCGCATCGGCGGGACAAGCATGAGGTCTCCCGGCGACCATG
ACGGTAACAACAACGACGGAAGAACCCAACGTACCGAGCTCCGAGGAGTT
CCGATGAGCGACTGCGCATCTTGTGGTCGAGATCGCGGCCAGTGGGATGA
AGGTGATGAGCAGCAGCACCGCCATCAGAGTGACACGGGTGGTGGATTGG
TGTTGATCAAATCCTTCAAGACAGGGAGCACCACACTGGCGACCTACATT
GCACAGGAGGTCTCCCGGCGACCATGACGGTAACAACAACGACGGAAGAA
CCCAACGTACCGAGCTCCGAGGAGTTCCGATGAGCGACTGCGCATCTTGT
GGTCGAGATCGCGGCCAGTGGGATGAAGGTGATGAGCAGCAGCACCGCCA
TCAGAGTGACACGGGTGGTGGATTGGTGTTGATCAAATCCTTCAAGACAG
GGAGCACCACACTGGCGACCTACATTGCACAGGTTGGCCACCAGAGACGC
TCCTACTTCTTGCACCCCAAGGCCACCGGCTGGTTCGGGCGGGGGGAGCT
CGAATCCCGGCGCGACGAGGGCCAGGCGTTCGATATAAGCCTTCGACACG
TGACGCCGTACACCCCGTACGGCGTGCTGGAGGAGCTGGTGCCCGCGGCG
GCCTTCGTGACGATAATGCGCCGCCCCGCCGAGCGCTTCCTGTCGCTCTT
CAACTTCCGGGGGGATATCAAGAAGAAATACAAGGTTGGCCACCAGAGAC
GCTCCTACTTCTTGCACCCCAAGGCCACCGGCTGGTTCGGGCGGGGGGAG
CTCGAATCCCGGCGCGACGAGGGCCAGGCGTTCGATATAAGCCTTCGACA
CGTGACGCCGTACACCCCGTACGGCGTGCTGGAGGAGCTGGTGCCCGCGG
CGGCCTTCGTGACGATAATGCGCCGCCCCGCCGAGCGCTTCCTGTCGCTC
TTCAACTTCCGGGGGGATATCAAGAAGAAATACAAGACCCCACAAGCGCT
GGTGACCGAGATCCGGGCCGGAAGAGTGCCTCAAAGTGATGCCCGACCGT
TTTGCAATCAGCTCGCGTGGCTCATGTCCGGGAGGGACGTCGACTTCACC
AAGATCGTGGATGCGGAGAAAGCTCGAAGACCCCACAAGCGCTGGTGACC
GAGATCCGGGCCGGAAGAGTGCCTCAAAGTGATGCCCGACCGTTTTGCAA
TCAGCTCGCGTGGCTCATGTCCGGGAGGGACGTCGACTTCACCAAGATCG
TGGATGCGGAGAAAGCTCGAAGGGTGGCCAGCGAGGTCATGGAGGAGGCT
GAGAGACACGGCGTGGTGGTGCTCATCACGGAAAGGATGTCAGAATCCGT
CGCCGTCCTGGGTGGCCAGCGAGGTCATGGAGGAGGCTGAGAGACACGGC
GTGGTGGTGCTCATCACGGAAAGGATGTCAGAATCCGTCGCCGTCCTGGC
GCATCTCATGCAATGGGACATGGATACGATCGAGCTCAACGTTGGTTCCC
AAAGAGTGCAGGACGCAGGGCGCGGCTACTTTTCCTGCCCCGCCGCTGGC
ACCAACAACAAGTGCATGAGCGCCATCAGGCGCATCTCATGCAATGGGAC
ATGGATACGATCGAGCTCAACGTTGGTTCCCAAAGAGTGCAGGACGCAGG
GCGCGGCTACTTTTCCTGCCCCGCCGCTGGCACCAACAACAAGTGCATGA
GCGCCATCAGAGGGTGTAACCTGGTCGACGAGGTGCTGTACGAGCACTAC
GAGCGACAGTTCGAAACCCTAGTGCGCGCGTTGCCTTCACGAACGTCAGA
GCGGGTAGCTGCGATGCTGGGCGGTCATGCCAAGGCCAAGAGGGTGTAAC
CTGGTCGACGAGGTGCTGTACGAGCACTACGAGCGACAGTTCGAAACCCT
AGTGCGCGCGTTGCCTTCACGAACGTCAGAGCGGGTAGCTGCGATGCTGG
GCGGTCATGCCAAGGCCAAGCACACGATGTCAATGTTGGATCGCGGGAAG
TTTCCGGTCAACTGCATCAGCAGCAGCCCCGGAGCGGAAAGACGCACCGG
ACGGGGCAACGGTGGCGGGGGCGACGGATTGACATCACCCGAATCCAGCG
AAGAGCTCTACCGCCGTCTTCACTCGTGCGACGGACGTCCTCGATGACAC
ACGATGTCAATGTTGGATCGCGGGAAGTTTCCGGTCAACTGCATCAGCAG
CAGCCCCGGAGCGGAAAGACGCACCGGACGGGGCAACGGTGGCGGGGGCG
ACGGATTGACATCACCCGAATCCAGCGAAGAGCTCTACCGCCGTCTTCAC
TCGTGCGACGGACGTCCTCGATGA
back to top