mRNA_E-siliculosus-1a_F_contig1302.1847.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1302.1847.1
Unique NamemRNA_E-siliculosus-1a_F_contig1302.1847.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 2.520e-178
Identity = 257/272 (94.49%), Postives = 262/272 (96.32%), Query Frame = 1 
Query:    1 SGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDERVGDARPPDTNANNTDDAPPPSTLHGGQVKDARVSGGHYMATNPTFTPTPV 816
            +GIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYD VVVSIFFLEFIVGLCMF IVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKD+DERVG+ARP D N+N+T   PPPSTLHGG VKD R SGGHYMATNPTFTPTPV
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVGNARPSDINSNSTVGVPPPSTLHGGHVKDDRGSGGHYMATNPTFTPTPV 281
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 5.800e-118
Identity = 181/268 (67.54%), Postives = 216/268 (80.60%), Query Frame = 1 
Query:    1 SGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDERVGDARPPDTNANNTDDAPP--PSTLHGGQVKDARVSGGHYMATNPT 798
            SG++W LC++VEDMMVTVCW   +L   IK VKF+E  SS+M+A+THLAICVNLALIVSSHRTL RVQSVSSP LL+L+LAIS+G+T+ TVPLWETV V+GT FWIVNSDQG YD VVVSIFFLEF+VG+CMF I+AWLLLFR+KEVKECWRI ARIRYY CLT+LGT +++ IGICSTVFV+G + + RLAIW+WV RYIH+ALDTFVLYGVLREKD+DER G+AR  + N N++ ++     S  HG      R  G     TNPT
Sbjct:   59 SGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNARSSNYNCNDSANSSGLVVSRRHG--KSSPRSGGSSINTTNPT 324
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.560e-82
Identity = 125/222 (56.31%), Postives = 165/222 (74.32%), Query Frame = 1 
Query:    1 SGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDER 666
            SG +  L  + ED+MV+ C+A  NL  LIKT+ FV + SS+MLA T+L IC+NLALIVSSHRT+ RV++VSSP +L +ML +S  + AATVPLWET +V+GT FW  NSD  K D +++SI+ +EF+VG+CM  IV WL +FR+ E+KECWR H+RIRYY CLT+ GT ++L +GIC   +V G  K+    IW+W+FRYIHI+ DT VLYG LRE  +DER
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDER 230
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 3.210e-75
Identity = 117/200 (58.50%), Postives = 156/200 (78.00%), Query Frame = 1 
Query:   43 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVL 642
            MV VCWAG N+   +K +KF+EL +S+MLA+T+LAIC NLAL++ SHRTL RV+S SSP L+ L LA+S+ +  A  P W+T +V GT F + N DQ   D + VS FFLEF+VG+CMF IVAWLLLFR+ EVKECW++HARIRYY  LT++GT ++L++G+C T++V+GG +++ L +  W FR+IHIALDTFVLYGVL
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 2.890e-72
Identity = 114/217 (52.53%), Postives = 157/217 (72.35%), Query Frame = 1 
Query:   28 LVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDERVGDA 678
            + +  M++VCW G+ LE  IK +K++E  SS+MLA+T+LAIC+NLAL+V+SHRTL RV SVS+P L+ L LAIS+   AA+VP W   +V GT+FW+ N+D+ K D ++VSI  LEF+VG+CMF IV+WL+ FR++ +KECW++HARIRYY  LTV+GT ++L++GI    +V        L    W FRY H+ALDT VLYGVL  + +DE  G A
Sbjct:    3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSA 219
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 3.420e-66
Identity = 116/245 (47.35%), Postives = 168/245 (68.57%), Query Frame = 1 
Query:   43 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDERVGDARPPDTNANNTDDAPPPSTLHGGQVKDARVSGGH 777
            M++VCWAG+NL   IKT+KF+EL +S+MLA+T+LAICVNL+LIV S R    V+S+S+  L+ L LA+S G+ A  VP W   ++ GT FW +  ++  ++ V++S F +EF+VG+CMF IV+WLLLFR+ E+KECW +HA +RYY  LT+LGT  +L++G+C T++V+  +    L I++W FR + IALDT VL+ VL  K +DER     PP   A+    APPP++  G +    R+ G H
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERA--ETPPTDGAS---PAPPPASSRGSR----RLGGAH 236
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 1.270e-63
Identity = 101/188 (53.72%), Postives = 147/188 (78.19%), Query Frame = 1 
Query:    1 SGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQ 564
            SG++  L ++ E  MV+VCWAG +L  LIKT+KF ELA+S+MLA+T+LAICVNLALIV SHRTL RV+S S+P L+ + LA+S+G+ A +VP W  ++V GT+FW+   +Q  +D +VV+ FF+EF VG+CM  IV WL++FR  E+K+ W++HARIRYY  LT++ TG++L++GIC T++V+G +K+
Sbjct:   85 SGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
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BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 4.510e-59
Identity = 93/168 (55.36%), Postives = 132/168 (78.57%), Query Frame = 1 
Query:   43 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFV 546
            M++VCW G+ LE  IK +K++E  SS+MLA+T+LAIC+NLAL+V+SHRTL RV+SVS+P L+ L LAIS+   AA+VP W   +V GT+FW+ N+D+ K D ++VSI  LEF+VG+CMF IV+WL+ FR++ +KECW+IHARIRYY  LT++ T ++L++GI    +V
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.060e-58
Identity = 100/170 (58.82%), Postives = 134/170 (78.82%), Query Frame = 1 
Query:   43 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLG 552
            M++VCWAG NL +LIK +KF+ELAS++MLA+T+LAICVNLAL+V SHRTL RV S+SSP ++ L L +++G  AA VP W+T+I+ GT F   + D+   D  VVS F  EFIVG+CM AIVAWLLLFR+KE+KECW++H RIRYY  LT++ TG++L +GI  TV+++G
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVG 170
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Match: D8LNN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN7_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 8.110e-57
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 1 
Query:  235 MLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDLDERVGDAR 681
            ML +S  +  ATVPLWET +V+GT+FW  N D  KYD V++SI+  EFIVG+CM  IV+WL +FR+KE+KECW+IH RIRYY CLT+LGT ++L +GIC   FV G  KQ  L IW+W+FRYI I+ DT VLYGVLRE  +DER  + R
Sbjct:    1 MLLVSASLAVATVPLWETTVVLGTAFWFTNPDPAKYDFVIMSIYIFEFIVGICMLVIVSWLAMFRMKEMKECWKIHPRIRYYFCLTLLGTAVNLGLGICGAAFVKGDRKQPLLQIWSWLFRYIQISFDTLVLYGVLREGSIDERAEEDR 149
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1302.1847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FTK4_ECTSI2.520e-17894.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK5_ECTSI5.800e-11867.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE1.560e-8256.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN1_ECTSI3.210e-7558.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8K6_9PHAE2.890e-7252.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP0_ECTSI3.420e-6647.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNM4_ECTSI1.270e-6353.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN2_ECTSI4.510e-5955.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE1.060e-5858.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN7_ECTSI8.110e-5759.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1302contigE-siliculosus-1a_F_contig1302:26109..31625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size819
Model size819
Exons4
Ec32 orthologEc-13_004720.1
Ec32 ortholog descriptionexpressed unknown protein
Hectar predicted targeting categorysignal peptide
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1302.1847.1prot_E-siliculosus-1a_F_contig1302.1847.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1302 26109..31625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927825.9606671-CDS-E-siliculosus-1a_F_contig1302:26108..263641622927825.9606671-CDS-E-siliculosus-1a_F_contig1302:26108..26364Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 26109..26364 -
1696318696.4219947-CDS-E-siliculosus-1a_F_contig1302:26108..263641696318696.4219947-CDS-E-siliculosus-1a_F_contig1302:26108..26364Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 26109..26364 -
1622927825.9758577-CDS-E-siliculosus-1a_F_contig1302:27463..276931622927825.9758577-CDS-E-siliculosus-1a_F_contig1302:27463..27693Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 27464..27693 -
1696318696.4315195-CDS-E-siliculosus-1a_F_contig1302:27463..276931696318696.4315195-CDS-E-siliculosus-1a_F_contig1302:27463..27693Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 27464..27693 -
1622927825.989585-CDS-E-siliculosus-1a_F_contig1302:29467..296231622927825.989585-CDS-E-siliculosus-1a_F_contig1302:29467..29623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 29468..29623 -
1696318696.4465353-CDS-E-siliculosus-1a_F_contig1302:29467..296231696318696.4465353-CDS-E-siliculosus-1a_F_contig1302:29467..29623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 29468..29623 -
1622927825.9999144-CDS-E-siliculosus-1a_F_contig1302:31448..316251622927825.9999144-CDS-E-siliculosus-1a_F_contig1302:31448..31625Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 31449..31625 -
1696318696.4595504-CDS-E-siliculosus-1a_F_contig1302:31448..316251696318696.4595504-CDS-E-siliculosus-1a_F_contig1302:31448..31625Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1302 31449..31625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1302.1847.1

>prot_E-siliculosus-1a_F_contig1302.1847.1 ID=prot_E-siliculosus-1a_F_contig1302.1847.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=273bp
SGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAI
CVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVV
GTSFWIVNSDQGKYDVVVVSIFFLEFIVGLCMFAIVAWLLLFRLKEVKEC
WRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRY
IHIALDTFVLYGVLREKDLDERVGDARPPDTNANNTDDAPPPSTLHGGQV
KDARVSGGHYMATNPTFTPTPV*
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mRNA from alignment at E-siliculosus-1a_F_contig1302:26109..31625-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1302.1847.1 ID=mRNA_E-siliculosus-1a_F_contig1302.1847.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5517bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1302:26109..31625- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCGGGATCATATGGAGCCTGTGTTGGCTTGTAGAAGACATGATGGTGAC
GGTCTGCTGGGCCGGGAAAAATCTCGAGGACCTGATCAAGACCGTCAAGT
TCGTCGAACTGGCTTCTTCCCACATGCTGGCCCTCACGCACCTCGCCATC
TGCGTCAACCTGGCCCTCATCGTCTCGGTGAGATGATTGTGTTCCGATAT
TTGCTTAGATGCAAGAAACACCCTGCCAACATGTGTTTCCAAGATCTCGT
AACAGCGATCAGGCACGTATCTAATTCGTGTATCCTCCCACCCCGTATAT
GCGCACGAAGCCGGAGAGTGCACTTCAGTTGCAGTGACACGTGTGCCTTG
ACGTTTATCGCGACGATAGGCCAGCCACTGTTCTTATATCTTATGGCCAT
CTTCCACGAACGGGCCGTGAACGTTACCATACCCGGCCGGTGATAGCTTG
ATTTCCCGCACTCGGGGATGGCGGTGATCTTTCGCGGGACACCGTATGTA
ATAGGTGGAGAGATTCCACTCCCCCCATAGACCGACGTTTAGAGCTCGAT
TACTCCACGACCAACATTTTTTGTACCGTACCGTAAACCGTACCGTGGTA
TTCCGTAAGAGGCGGAGAGATGACACCCCCCCATAGACCGACTTTAAAAG
CTCGCTTCGATTGCTCCACAAGCAAGGAGTTGCCGAACGAGCTCGATACT
TGTACGGAAAGACGAGTTTTTGTTTTTTGTTCTTCCAAAACCATCGCTTT
TGGTGTTGGGATAGTCTTCGTTGTGGAGCAATCGAACCTTGAAAGTCGGT
CTATGGGGGGAGTGCCATCTTCCCACCTCTTACGGAATACGGTATACGGT
AAGGTGCAGAAAATCTTGGTTATGGAGTAGTCGAGCTCCGAAAGTCGGCC
TAGGGGGGGTGCTATCTCTCCGCCTCCTGCGGTACTGCCGAAAACGCCTC
GTTTTGATGCACCCATCCTCTTTGTCGTGAATTATTCGAGCTTGGAGAAC
TCGTCCCGGTGGTGTGGCACCTTCTTTCGTCACCTCTGGTAGTTGTGGTG
CCCGATATTGTTTCGGTTTCTGCCCCCCCCCCTCGCCATGGGGCGCTTTA
TGCGTGGCTGATTTTTCAAAAGTTTTGGCTTCTCACCAATTGGAAGCCAT
CGAAAAACTGGCAAGTGAGTAGGGCCCAAACAAGTGGGAATGTGGGTTCC
AATTGTCTTTACTTTCCTACTTTTTGCCTTCGAGCCCGTTTTGCAAAGTT
CCCTAAATGGGGTATATATTCCGAGATTTTTCGGGAAAACTGGGCCATGT
ATACAATGCGCCTGACCTGTGCGCTCTTTCTACCCGATGGCGTCTGTCGT
CCCCCACCCACCAGGGTGCATACCATCAGATAGAGGTGCATTGAAGTATG
TACTAGCCGAGTCCTTCGTACTACAGTCGTGGTCCCGGTTTACCGGTTCC
CTTTTTAGCGGGATGGATGCCCTGAATAGCGGTTCCAAAATCTCGTGGCA
CGGGTGCACGTCGGTAGTCCGAACTACATTATGACTGCCAGTCCGGTTTA
GCGGTGATGCCCTCATTAGCCGTCATACACTTTTTGTGACACTATGGACA
CCTTTATCGGGGCCACCCCTGTACTGTAGGCTGTCTCGTCGTGTAGACTA
CCGTATACGATACAAGATAACACACCCCCTGGACCGATTTTCAAAGCTCG
ATGTCTCCACAACAGAGAGAGTCAGAGCGCCAAAAACGGTGTCGGTGACG
CCGCCTTGTCGAGATCTTTCCGAAAATGTATCATTTCGTTTATGCATGTT
CCTCGTCGTGGTGTAATCGAGCTTTGAAAATCGGTCCAGGGGGTGTGTTA
TCTTGTGTCGTATATGGTAGCTGTGGTGGGCGTTTCCGTGTTTGTTTTCT
GTCACCCCGCCAACTAACGAACTCGCTTCTTTCCCTCCGTTGGTTTCCGG
TCGACTTCTTTCTGCGCACGCCGTGTTTATCATGTGTTGTTCACACGCGC
AGTCCCACCGGACGCTTAAGCGTGTTCAGAGCGTCAGCTCGCCGGGACTC
CTGACGCTGATGCTGGCCATCTCCATGGGGATGACGGCAGCCACGGTACC
CTTATGGGAGACCGTGATCGTGGTCGGGACCAGCTTCTGGATAGTCAACT
CCGACCAGGTAATACCGTAGGTGACATGACGTAAGATAGCATTCCCCCTG
AAGCGATTTCCAAAGCTCGATTAATCAACAGCACCAAGAGTCGCAGCGCC
GAAGTCGGGACCAGCTTCTGGATCATCAACTCCGACCAGGTACCTACCGT
AGTGACATGACGCTAGACAACAAACCCCCTTGGACCGAGTCTCAAAGCTA
GATTATTTTCAGCAGAAAGAGCCGCAGAGCCCAAACCGGCGGCGTTGAAG
CCGTCTGTTCGAGAGCTCGTCGAAAACGTATCGTTTCGTTTATGCATCCT
CTTGGTCGTGGAGTAATCAAGCTTTGAAAACCGGTTCAGGGGTGTTATCT
TGTGTCGTATACGGTACTACTGCACTCCACAACGGAAGAAGGTGTAATAT
TATAGTGAGGGCCCAATCATGGAAATAATCTCGACGGGACTGTACCAAGG
TCGAGATTGTCGGCACCGCCACTCCTTCCGCCGTGGAAAAATCGAGAGTT
TTTTGTCACATAGACCGTTGGAACAATTGAAAGCACCCCAGCGTCGAAAA
CAACTAGTATTTGCAAGCAGAGGTTCTTGAGTGCGGACGCTTTGTGTAAG
GTAAAGAAACACACGATGAGCAATCCCTTCCCCCTCCAACTGCCACTCCC
GGCATTCCCCTTCCTCAGAGCGAGGGTTCCGCTCGATTTTCCACTCAAAA
CTCTTGCGTCCCAAACACTGGAAATTGAAAATTACCCGAAACAAAACACA
CCAAATTTATCAAAAACACCCACTTTTTATCCCTCGATGGTAACCGCGGA
GGTTCGGTTTTAGTGTATAGCATAGGAGGCGTCTTCCACGTAGCCTGACG
CTTTATACTGTCCATGTATTCAGACCGAACGCTACGTGGTAATGTGCTCT
TGTTGACGAAGGTCGTGGGGTTTGTTTTCTCTTGATTACGCGCTGACGGT
GCTTGTGTTTTGACGTCCTACAGGAAACAAAGTTGGCGTTTGGTTGTCTT
TCGTCTGTAGGAAGGCCAACTACATGGAACAATATCTCTTCGACCGTACG
GTACTCCTCGATCAGAAAATGTTTTCGACATAATCCGGGAGAGGGGGTCG
TGATGTTCGAAATCGAAACTATTTTGGTCCCGTTTCCTTCAACGGAAAGA
AGTGGTGTCGTCCGCCTAGCGCTCGCCTTGTCTGCCTTGGCTCCGAGAGA
GCGAATAAAGCATATGCGACAAAATTGTAGAAATCGACAGAGAGGGAGAG
GGCGATAGGGGGGCGGGAACGAATCCCAAAGAACCGTCACCCGTCCGTGT
GCAAACGCATGCTACCACCAAGGGAGCCTTGCCGGCGATGTTGCCTCAGA
ACCAAGAATCAAATCAACTTTTTACCCAATTCTGATGGCTCAATCTAGCA
TTTGTGTGACCACGGACCGATTATTTGCTGGATTTTGGGAAATAGCAACT
GACACGAGTTTAATGTGAAGAGAATAACAACAACAACAACAGCAACAACA
ACTCCACCTCCTCAACAGCCGTGCGCCGTGTGCGGCTTGGCCTAATGTTT
CTTGGGAAAATTTGTCGTGTCGTATTGGGTCTTCGCCGTCTGTCCGGACT
CCTTCCTTTCCGTCCTACACCACGCACATTTTCTCCTCCTGCCCCACTTG
ATTGAATCATGAACCCCTGTGTACGCCACTCAGCACTTCAGGGGAAATAC
GACGTCGTTGTCGTCTCCATTTTCTCCTCCTGCCCCACTTGATTGAAACA
TGATCCCATGTGTACGCCACACAATACTTCAGGGGAAATACGATGTCGTC
GTCGTCTCCATCTTCTTCCTCGAGTTCATCGTCGGCCTCTGCATGTTCGC
CATCGTGGCGTGGCTCCTGCTGTTCCGCCTGAAAGAGGTCAAGGAGTGCT
GGAGGATCCACGCAAGGATCCGCTACTACCTGTGCCTGACTGTTCTAGGC
ACGGGCATCAGTCTTAGCATCGGAATCTGCAGCACCGTCTTCGTCTTGGG
CGGGTTGAAGCAGTGAGTCGATAGGGTCTGACCCGCGGGATCTCCGTAGA
TCTGTGTCAGTGCCCGTTGAAGCGGTTAGTAAAAAGGGCTGATCTCCGTT
GATCTGTCTCAACGCCTTTCATTGAAGCAGTTTGTGAATGATCTACGTAG
ATTTGTCTCAAGGCCCAATGAATCCATCACTCAAACGGGCTGATCTACGT
AAATCTGTCTCAACTCCCATTGAAGCAGTGAGTCGATAGGGTAGGGCATG
ACCTACGGGGTCTAGAGCCGTCTCCCGTTCTGAAACTGCCTACCCGTATC
TAACCCCTGTGCCGGTGTACTATATGCATCCCAAATCATGATACAGACTA
CATTTTGTTGTTGTTGTTGTAGCTATCTTCACGTTGAAAATCGCTTCGAG
CTCTACTAGAACCTTCCAATCTCGGTAGGTACTTGTCCAACTCAATCGAG
GCGCCTCCGATGGTAGTTTTTGTTTTTCCCGATCGTGCTACAATACAACA
TATGTTGCTTTCGGGAGCACGTATCAAGACACGAAGGATGCTCAGGGTTA
GGGTTAGGGTTACGTAGTAGGTTTGGTTGAGCATGCTCTACTGTAAGTCT
AGTCCACGGCAGTTGGCGACTCACACCAACCTCTTTGCTCACCAGTCACA
ATCACGCCATCTGTTTGTTCGGTCTTGCATCACTTGAAATCAAAAGCCTT
GGTTCTTCTGTAGCTGTAGTTGTTGCCTTCACACGAAAAGCCGTTCCGAT
CTCTATACCCAGTACCATCTTTTGTCCGTACTAGTCCAACACTTGACGAG
GTCGGTTCCCGTGGTCACAGCCTAACTCACCCTAAAACGGTGTACTCAAT
AATTATGTACCCGAAGTAGGCATGAGAAAAACAAGAGTTTTTGCATACAC
ACCACGGATGGAAGGCGTCGCGTCAGGTGGGACAGTACGGGTATTACGGA
GTACTTGGTACTGAGCGGAAAATGGAACGAGACATAATGTCAAGGCTACA
ACAACAAACAACAACAAACAAAAACAAACAAACAACAACAACAACAACAA
CCACCTGCGCGCCGCGCGTACGTCCCGACCCTGGCTGCGATTTCGATGAC
GATATTTCCAGGACCCGGCTGGCGATCTGGGCCTGGGTCTTCCGATACAT
TCACATCGCGCTCGATACGTTCGTGCTTTACGGTGTGCTTCGCGAGAAGG
ACTTGGATGAGCGCGTTGGAGACGCTCGGCCGCCCGACACCAACGCCAAC
AACACCGACGATGCCCCGCCTCCCTCTACCCTGCACGGTGGACAAGTGAA
GGACGCGCGTGTGTCAGGCGGTCATTACATGGCGACCAATCCTACCTTTA
CCCCGACCCCAGTTTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1302:26109..31625-

>mRNA_E-siliculosus-1a_F_contig1302.1847.1 ID=mRNA_E-siliculosus-1a_F_contig1302.1847.1|Name=mRNA_E-siliculosus-1a_F_contig1302.1847.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1638bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1302:26109..31625- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCGGGATCATATGGAGCCTGTGTTGGCTTGTAGAAGACATGATGGTGAC
GGTCTGCTGGGCCGGGAAAAATCTCGAGGACCTGATCAAGACCGTCAAGT
TCGTCGAACTGGCTTCTTCCCACATGCTGGCCCTCACGCACCTCGCCATC
TGCGTCAACCTGGCCCTCATCGTCTCGAGCGGGATCATATGGAGCCTGTG
TTGGCTTGTAGAAGACATGATGGTGACGGTCTGCTGGGCCGGGAAAAATC
TCGAGGACCTGATCAAGACCGTCAAGTTCGTCGAACTGGCTTCTTCCCAC
ATGCTGGCCCTCACGCACCTCGCCATCTGCGTCAACCTGGCCCTCATCGT
CTCGTCCCACCGGACGCTTAAGCGTGTTCAGAGCGTCAGCTCGCCGGGAC
TCCTGACGCTGATGCTGGCCATCTCCATGGGGATGACGGCAGCCACGGTA
CCCTTATGGGAGACCGTGATCGTGGTCGGGACCAGCTTCTGGATAGTCAA
CTCCGACCAGTCCCACCGGACGCTTAAGCGTGTTCAGAGCGTCAGCTCGC
CGGGACTCCTGACGCTGATGCTGGCCATCTCCATGGGGATGACGGCAGCC
ACGGTACCCTTATGGGAGACCGTGATCGTGGTCGGGACCAGCTTCTGGAT
AGTCAACTCCGACCAGGGGAAATACGATGTCGTCGTCGTCTCCATCTTCT
TCCTCGAGTTCATCGTCGGCCTCTGCATGTTCGCCATCGTGGCGTGGCTC
CTGCTGTTCCGCCTGAAAGAGGTCAAGGAGTGCTGGAGGATCCACGCAAG
GATCCGCTACTACCTGTGCCTGACTGTTCTAGGCACGGGCATCAGTCTTA
GCATCGGAATCTGCAGCACCGTCTTCGTCTTGGGCGGGTTGAAGCAGGGA
AATACGATGTCGTCGTCGTCTCCATCTTCTTCCTCGAGTTCATCGTCGGC
CTCTGCATGTTCGCCATCGTGGCGTGGCTCCTGCTGTTCCGCCTGAAAGA
GGTCAAGGAGTGCTGGAGGATCCACGCAAGGATCCGCTACTACCTGTGCC
TGACTGTTCTAGGCACGGGCATCAGTCTTAGCATCGGAATCTGCAGCACC
GTCTTCGTCTTGGGCGGGTTGAAGCAGACCCGGCTGGCGATCTGGGCCTG
GGTCTTCCGATACATTCACATCGCGCTCGATACGTTCGTGCTTTACGGTG
TGCTTCGCGAGAAGGACTTGGATGAGCGCGTTGGAGACGCTCGGCCGCCC
GACACCAACGCCAACAACACCGACGATGCCCCGCCTCCCTCTACCCTGCA
CGGTGGACAAGTGAAGGACGCGCGTGTGTCAGGCGGTCATTACATGGCGA
CCAATCCTACCTTTACCCCGACCCCAGTTTAGGACCCGGCTGGCGATCTG
GGCCTGGGTCTTCCGATACATTCACATCGCGCTCGATACGTTCGTGCTTT
ACGGTGTGCTTCGCGAGAAGGACTTGGATGAGCGCGTTGGAGACGCTCGG
CCGCCCGACACCAACGCCAACAACACCGACGATGCCCCGCCTCCCTCTAC
CCTGCACGGTGGACAAGTGAAGGACGCGCGTGTGTCAGGCGGTCATTACA
TGGCGACCAATCCTACCTTTACCCCGACCCCAGTTTAG
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