mRNA_E-siliculosus-1a_F_contig12987.1808.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A3S9NTL7_9FLAO (Alpha-amylase n=1 Tax=Maribacter sp. MJ134 TaxID=2496865 RepID=A0A3S9NTL7_9FLAO) HSP 1 Score: 363 bits (932), Expect = 1.030e-121 Identity = 169/259 (65.25%), Postives = 203/259 (78.38%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLSPVN 777
+LDFL AL FC K DFWL+GEVVFGDY+EWAN+ L SVTNYEYHTPL ESFN +F I+ +L+RQFG G YK L +Y+FVDNHDV+RAAS L+EPAHL+PLYLLLFTLPGIPAIYYGSEWGFEG+I++G H LRPK L ++ AKHPLL+DSIKRFTA R T L +GDY+EL V EQLVFAR + + VIC++NASR + L+IPL Y + GYKDLLN EY K ++GML +EIPSCWGRVL+P++
Sbjct: 191 DLDFLEALRTFCTNKKQDFWLLGEVVFGDYREWANANRLHSVTNYEYHTPLSESFNRENFEHIASILRRQFGPAGTYKDLTLYSFVDNHDVDRAASALAEPAHLFPLYLLLFTLPGIPAIYYGSEWGFEGRIKDGTHDALRPKAVLGAIEKQAKHPLLLDSIKRFTALRKTNKCLRQGDYKELLVQKEQLVFARALDSDVVICIINASRHVVNLEIPLGPYTSTGYKDLLNPEYSGKVRDGMLRVEIPSCWGRVLAPLD 449
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI00188B6CAF (alpha-amylase family glycosyl hydrolase n=2 Tax=Zobellia nedashkovskayae TaxID=2779510 RepID=UPI00188B6CAF) HSP 1 Score: 307 bits (787), Expect = 8.160e-100 Identity = 144/256 (56.25%), Postives = 179/256 (69.92%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
+ DF+ LA+FCKK+NP+FWLMGEVV GDY W NS MLDSVTNY+YHTP+YESFN +DFGKIS ++R+FG GVYK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYG EWGFEGK LRP+V L ++ AKHP L+D+IK+F + L G Y+ L VTNEQL F R + ++ +VNAS + ++I L+ Y DLLN Y + LS+E+P CWGR+LS
Sbjct: 191 DFDFMKELALFCKKENPEFWLMGEVVHGDYNRWVNSTMLDSVTNYDYHTPIYESFNLKDFGKISETVEREFGPKGVYKNLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGGEWGFEGKKTAHSDDLLRPRVKLNDLGRQAKHPKLLDAIKQFIEVQKNCKVLVNGSYETLLVTNEQLAFFRKNTYKTIVVIVNASTKVAKVNIDLKGLPLGVYTDLLNAGYTSISNKTALSIEVPPCWGRILS 446
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C06E31B (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia sp. B3R18 TaxID=2841568 RepID=UPI001C06E31B) HSP 1 Score: 303 bits (776), Expect = 5.250e-99 Identity = 141/255 (55.29%), Postives = 180/255 (70.59%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
+ DF+ LA FCKK+NP FWLMGEVV G+Y WAN +MLDSVTNY+YHTP+YESFN +DF KIS ++R FG G+YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRP V L+N+ AKHP L+D+IK+F R +LS G Y+ L V EQ F+R ++ V+ +VN S Q + ++IP++ A+ + D LN +Y + LS+E+P CWGR+L
Sbjct: 127 DFDFMKELARFCKKRNPHFWLMGEVVHGNYNRWANDRMLDSVTNYDYHTPIYESFNLKDFSKISETVERDFGPKGIYKDLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSAHSDDLLRPSVELENLKKQAKHPKLLDAIKQFIGARKKCKSLSTGKYETLLVKKEQYAFSRKEKDGTVVVIVNMSNQPVKVNIPVKGLLAKDFTDFLNPDYCLIPNKTGLSVEVPPCWGRIL 381
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C07B741 (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia uliginosa TaxID=143224 RepID=UPI001C07B741) HSP 1 Score: 304 bits (778), Expect = 1.860e-98 Identity = 142/255 (55.69%), Postives = 178/255 (69.80%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
+ DF+ L++FCKK+NP FW+MGEVV G+Y +W N+ MLDSVTNY+YHTP+YESFN +F KI++ + FG G YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRPKVNLKN+ LAKHP L+D+IK+F R L G Y L V EQ VF R + VI +VN+S + ++IPL+ + + + DLLNTEY KA L +E+ CWGR+L
Sbjct: 191 DFDFMRELSLFCKKENPGFWIMGEVVHGNYNKWVNATMLDSVTNYDYHTPIYESFNSGNFSKIAKTATQNFGPKGRYKNLELYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKTAHSDDLLRPKVNLKNLGKLAKHPKLLDAIKQFICVRDNCKTLLYGAYDTLVVNKEQYVFTRKSTYKTVIVIVNSSSKVAVINIPLKGFLLQNFSDLLNTEYCQKANENGLLVEVSPCWGRIL 445
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A844N3V9_9FLAO (Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=A0A844N3V9_9FLAO) HSP 1 Score: 301 bits (770), Expect = 3.000e-97 Identity = 138/256 (53.91%), Postives = 180/256 (70.31%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
+ DF+ L ++CKK+NP+FWLMGEVV GDY +W N MLDSVTNY+YHTP+YESFN +DF KIS +++ FG GVYK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRP V L ++ AKHP L+++IK+F + L G Y+ L VTNEQ F+R + +I +VNAS +++ ++I + + Y D+LNT Y + + LS+E+P CWGR+LS
Sbjct: 191 DFDFMKELRLYCKKENPEFWLMGEVVHGDYNKWVNPAMLDSVTNYDYHTPIYESFNLKDFSKISEMVELDFGPKGVYKNLELYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKTAHSDDLLRPHVKLNDLGKQAKHPKLLEAIKQFILVHKNSETLVNGSYETLLVTNEQYAFSRKSTYKTIIVIVNASNKSVKVNIDFKGLSSGVYADILNTGYTLTSNKTGLSVEVPPCWGRILS 446
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C0734A4 (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij) TaxID=63186 RepID=UPI001C0734A4) HSP 1 Score: 296 bits (757), Expect = 5.100e-97 Identity = 138/255 (54.12%), Postives = 180/255 (70.59%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
+ DF+ LA+FCK++NP+FWLMGEVV GDY W N MLDSVTNY+YHTP+YESFN +DFGKIS ++ FG GVYK +Y+FVDNHDV+RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEG+ LRP V ++ LAKHP L+ +IK+F A R ++ AL +G YQ L VT + F+R ++ V+ +VNAS ++ + IP ++ A DLL+ EY + + L +E+P CWGR+L
Sbjct: 63 DFDFMKELALFCKRENPNFWLMGEVVHGDYNRWVNPFMLDSVTNYDYHTPIYESFNLKDFGKISETVEEDFGPKGVYKNRALYSFVDNHDVDRAASSLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGRKSLHSDELLRPSVKRNDLGKLAKHPKLLGAIKQFIAARKSSEALVKGSYQTLLVTGQYYAFSRKSDNKTVVVVVNASNRSARIHIPFKEPSAMVLTDLLSPEYSLTSDKTGLYVEVPPCWGRIL 317
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A7X3D477_9FLAO (Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=A0A7X3D477_9FLAO) HSP 1 Score: 300 bits (767), Expect = 8.500e-97 Identity = 139/256 (54.30%), Postives = 182/256 (71.09%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
+ +F+ LA+FC+K+NP FWLMGEVV GDY +W N ML SVTNY+YHTP+YESFN +DF +IS+ ++R FG G+YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRP+VNL ++ AKHP L+D+IK+F + R L +G YQ L VT EQ F+R + V+ ++NAS + ++L IPL+ +E + DLL +Y + LS+ +P CWGR+LS
Sbjct: 191 DFNFMKELALFCEKRNPGFWLMGEVVHGDYNQWVNKTMLGSVTNYDYHTPIYESFNLKDFSRISKTVERDFGPKGIYKDLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSAHSDDLLRPRVNLSDLGKQAKHPKLMDAIKQFISARKNCETLVDGSYQTLLVTKEQYAFSRKSKGKTVVVIINASTKHVSLTIPLKGMLSEVFTDLLGPDYNLTYNKTGLSVGVPPCWGRILS 446
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: G0LAZ4_ZOBGA (Cyclomaltodextrinase, family GH13 n=2 Tax=Zobellia TaxID=112040 RepID=G0LAZ4_ZOBGA) HSP 1 Score: 294 bits (753), Expect = 1.100e-94 Identity = 137/255 (53.73%), Postives = 179/255 (70.20%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
+ DF+ LA+FCK++NP+FWLMGEVV GDY W N MLDSVTNY+YHTP+YESFN +DFGKIS ++ FG GVYK +Y+FVDNHDV+RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEG+ LRP V ++ LAKHP L+ +IK+F R ++ AL +G YQ L VT + F+R ++ V+ +VNAS ++ + IP ++ A DLL+ EY + + L +E+P CWGR+L
Sbjct: 191 DFDFMKELALFCKRENPNFWLMGEVVHGDYNRWVNPFMLDSVTNYDYHTPIYESFNLKDFGKISETVEEDFGPKGVYKNRALYSFVDNHDVDRAASSLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGRKSLHSDELLRPSVKRNDLGKLAKHPKLLGAIKQFIVARKSSEALVKGSYQTLLVTGQYYAFSRKSDNKTVVVVVNASNRSARIHIPFKEPSAMVLTDLLSPEYSLTSDKTGLYVEVPPCWGRIL 445
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A1N7IP63_9FLAO (Glycosidase n=1 Tax=Zobellia uliginosa TaxID=143224 RepID=A0A1N7IP63_9FLAO) HSP 1 Score: 293 bits (749), Expect = 4.400e-94 Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
+ DF+ ALA+FCKK+NP+FWLMGEVV GDY W N MLDSVTNY+YHTP+YESFN +DF KIS + FG GVYK L +Y+FVDNHDV RAAS L + HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRP V ++ AKHP LI +IK+F A R ++ AL +G YQ L VT + F+R + V+ +VNAS + + IPL+ A + DLL+ +Y + + L +E+P CWGR+L
Sbjct: 191 DFDFMKALALFCKKENPNFWLMGEVVHGDYNRWVNPLMLDSVTNYDYHTPMYESFNLKDFSKISETVDGDFGPKGVYKDLALYSFVDNHDVNRAASTLKKAEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSPHSDDLLRPPVKRNDLGKQAKHPKLIAAIKQFIAVRKSSEALVKGAYQTLLVTRQHYAFSRESNNETVVVVVNASNKAARIHIPLKSPSATVFTDLLSPKYSLVSDKTGLYIEVPPCWGRIL 445
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI00188C3909 (alpha-amylase family glycosyl hydrolase n=2 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188C3909) HSP 1 Score: 282 bits (721), Expect = 8.160e-90 Identity = 136/256 (53.12%), Postives = 178/256 (69.53%), Query Frame = 1
Query: 1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNT-EYIVKAQNGMLSLEIPSCWGRVL 765
+ F+ L+ FCK +NP+FWLMGEVV G+Y W LDSVTNY+YHTP+YESFN DF KI+ +L+RQFG GVY L++Y+FVDNHDV RAAS+L++P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK LRP V L +V AKHP L+D+IK+F + R L G Y+ + V EQ F+R + +I ++N+S + ITL IPL + Y D+LN + ++ ++ G LS+E+P CWGR+L
Sbjct: 191 DFGFMKELSSFCKSRNPNFWLMGEVVHGNYNRWITDAHLDSVTNYDYHTPIYESFNLSDFSKIAVILKRQFGPKGVYNNLSLYSFVDNHDVNRAASMLNKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKRTAHSDEALRPCVQLDDVQEQAKHPKLLDAIKQFISVRKNCKNLVYGAYETVLVKKEQYAFSRKDKDKTMIVIINSSNKPITLKIPLNGMFSGTYIDILNEGDSLIPSKTG-LSVEVPPCWGRIL 445 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12987.1808.1 >prot_E-siliculosus-1a_F_contig12987.1808.1 ID=prot_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPback to top mRNA from alignment at E-siliculosus-1a_F_contig12987:2..787+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12987.1808.1 ID=mRNA_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=786bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12987:2..787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12987:2..787+ >mRNA_E-siliculosus-1a_F_contig12987.1808.1 ID=mRNA_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12987:2..787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |