mRNA_E-siliculosus-1a_F_contig12987.1808.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12987.1808.1
Unique NamemRNA_E-siliculosus-1a_F_contig12987.1808.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A3S9NTL7_9FLAO (Alpha-amylase n=1 Tax=Maribacter sp. MJ134 TaxID=2496865 RepID=A0A3S9NTL7_9FLAO)

HSP 1 Score: 363 bits (932), Expect = 1.030e-121
Identity = 169/259 (65.25%), Postives = 203/259 (78.38%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLSPVN 777
            +LDFL AL  FC  K  DFWL+GEVVFGDY+EWAN+  L SVTNYEYHTPL ESFN  +F  I+ +L+RQFG  G YK L +Y+FVDNHDV+RAAS L+EPAHL+PLYLLLFTLPGIPAIYYGSEWGFEG+I++G H  LRPK  L  ++  AKHPLL+DSIKRFTA R T   L +GDY+EL V  EQLVFAR  + + VIC++NASR  + L+IPL  Y + GYKDLLN EY  K ++GML +EIPSCWGRVL+P++
Sbjct:  191 DLDFLEALRTFCTNKKQDFWLLGEVVFGDYREWANANRLHSVTNYEYHTPLSESFNRENFEHIASILRRQFGPAGTYKDLTLYSFVDNHDVDRAASALAEPAHLFPLYLLLFTLPGIPAIYYGSEWGFEGRIKDGTHDALRPKAVLGAIEKQAKHPLLLDSIKRFTALRKTNKCLRQGDYKELLVQKEQLVFARALDSDVVICIINASRHVVNLEIPLGPYTSTGYKDLLNPEYSGKVRDGMLRVEIPSCWGRVLAPLD 449          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI00188B6CAF (alpha-amylase family glycosyl hydrolase n=2 Tax=Zobellia nedashkovskayae TaxID=2779510 RepID=UPI00188B6CAF)

HSP 1 Score: 307 bits (787), Expect = 8.160e-100
Identity = 144/256 (56.25%), Postives = 179/256 (69.92%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
            + DF+  LA+FCKK+NP+FWLMGEVV GDY  W NS MLDSVTNY+YHTP+YESFN +DFGKIS  ++R+FG  GVYK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYG EWGFEGK        LRP+V L ++   AKHP L+D+IK+F   +     L  G Y+ L VTNEQL F R   +  ++ +VNAS +   ++I L+      Y DLLN  Y   +    LS+E+P CWGR+LS
Sbjct:  191 DFDFMKELALFCKKENPEFWLMGEVVHGDYNRWVNSTMLDSVTNYDYHTPIYESFNLKDFGKISETVEREFGPKGVYKNLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGGEWGFEGKKTAHSDDLLRPRVKLNDLGRQAKHPKLLDAIKQFIEVQKNCKVLVNGSYETLLVTNEQLAFFRKNTYKTIVVIVNASTKVAKVNIDLKGLPLGVYTDLLNAGYTSISNKTALSIEVPPCWGRILS 446          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C06E31B (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia sp. B3R18 TaxID=2841568 RepID=UPI001C06E31B)

HSP 1 Score: 303 bits (776), Expect = 5.250e-99
Identity = 141/255 (55.29%), Postives = 180/255 (70.59%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
            + DF+  LA FCKK+NP FWLMGEVV G+Y  WAN +MLDSVTNY+YHTP+YESFN +DF KIS  ++R FG  G+YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRP V L+N+   AKHP L+D+IK+F   R    +LS G Y+ L V  EQ  F+R ++   V+ +VN S Q + ++IP++   A+ + D LN +Y +      LS+E+P CWGR+L
Sbjct:  127 DFDFMKELARFCKKRNPHFWLMGEVVHGNYNRWANDRMLDSVTNYDYHTPIYESFNLKDFSKISETVERDFGPKGIYKDLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSAHSDDLLRPSVELENLKKQAKHPKLLDAIKQFIGARKKCKSLSTGKYETLLVKKEQYAFSRKEKDGTVVVIVNMSNQPVKVNIPVKGLLAKDFTDFLNPDYCLIPNKTGLSVEVPPCWGRIL 381          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C07B741 (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia uliginosa TaxID=143224 RepID=UPI001C07B741)

HSP 1 Score: 304 bits (778), Expect = 1.860e-98
Identity = 142/255 (55.69%), Postives = 178/255 (69.80%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
            + DF+  L++FCKK+NP FW+MGEVV G+Y +W N+ MLDSVTNY+YHTP+YESFN  +F KI++   + FG  G YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRPKVNLKN+  LAKHP L+D+IK+F   R     L  G Y  L V  EQ VF R   +  VI +VN+S +   ++IPL+ +  + + DLLNTEY  KA    L +E+  CWGR+L
Sbjct:  191 DFDFMRELSLFCKKENPGFWIMGEVVHGNYNKWVNATMLDSVTNYDYHTPIYESFNSGNFSKIAKTATQNFGPKGRYKNLELYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKTAHSDDLLRPKVNLKNLGKLAKHPKLLDAIKQFICVRDNCKTLLYGAYDTLVVNKEQYVFTRKSTYKTVIVIVNSSSKVAVINIPLKGFLLQNFSDLLNTEYCQKANENGLLVEVSPCWGRIL 445          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A844N3V9_9FLAO (Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=A0A844N3V9_9FLAO)

HSP 1 Score: 301 bits (770), Expect = 3.000e-97
Identity = 138/256 (53.91%), Postives = 180/256 (70.31%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
            + DF+  L ++CKK+NP+FWLMGEVV GDY +W N  MLDSVTNY+YHTP+YESFN +DF KIS +++  FG  GVYK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRP V L ++   AKHP L+++IK+F      +  L  G Y+ L VTNEQ  F+R   +  +I +VNAS +++ ++I  +   +  Y D+LNT Y + +    LS+E+P CWGR+LS
Sbjct:  191 DFDFMKELRLYCKKENPEFWLMGEVVHGDYNKWVNPAMLDSVTNYDYHTPIYESFNLKDFSKISEMVELDFGPKGVYKNLELYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKTAHSDDLLRPHVKLNDLGKQAKHPKLLEAIKQFILVHKNSETLVNGSYETLLVTNEQYAFSRKSTYKTIIVIVNASNKSVKVNIDFKGLSSGVYADILNTGYTLTSNKTGLSVEVPPCWGRILS 446          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI001C0734A4 (alpha-amylase family glycosyl hydrolase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CCUG 47099 / CIP 106680 / NCIMB 13871 / Dsij) TaxID=63186 RepID=UPI001C0734A4)

HSP 1 Score: 296 bits (757), Expect = 5.100e-97
Identity = 138/255 (54.12%), Postives = 180/255 (70.59%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
            + DF+  LA+FCK++NP+FWLMGEVV GDY  W N  MLDSVTNY+YHTP+YESFN +DFGKIS  ++  FG  GVYK   +Y+FVDNHDV+RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEG+        LRP V   ++  LAKHP L+ +IK+F A R ++ AL +G YQ L VT +   F+R  ++  V+ +VNAS ++  + IP ++  A    DLL+ EY + +    L +E+P CWGR+L
Sbjct:   63 DFDFMKELALFCKRENPNFWLMGEVVHGDYNRWVNPFMLDSVTNYDYHTPIYESFNLKDFGKISETVEEDFGPKGVYKNRALYSFVDNHDVDRAASSLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGRKSLHSDELLRPSVKRNDLGKLAKHPKLLGAIKQFIAARKSSEALVKGSYQTLLVTGQYYAFSRKSDNKTVVVVVNASNRSARIHIPFKEPSAMVLTDLLSPEYSLTSDKTGLYVEVPPCWGRIL 317          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A7X3D477_9FLAO (Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=A0A7X3D477_9FLAO)

HSP 1 Score: 300 bits (767), Expect = 8.500e-97
Identity = 139/256 (54.30%), Postives = 182/256 (71.09%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVLS 768
            + +F+  LA+FC+K+NP FWLMGEVV GDY +W N  ML SVTNY+YHTP+YESFN +DF +IS+ ++R FG  G+YK L +Y+FVDNHDV RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRP+VNL ++   AKHP L+D+IK+F + R     L +G YQ L VT EQ  F+R  +   V+ ++NAS + ++L IPL+   +E + DLL  +Y +      LS+ +P CWGR+LS
Sbjct:  191 DFNFMKELALFCEKRNPGFWLMGEVVHGDYNQWVNKTMLGSVTNYDYHTPIYESFNLKDFSRISKTVERDFGPKGIYKDLALYSFVDNHDVNRAASTLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSAHSDDLLRPRVNLSDLGKQAKHPKLMDAIKQFISARKNCETLVDGSYQTLLVTKEQYAFSRKSKGKTVVVIINASTKHVSLTIPLKGMLSEVFTDLLGPDYNLTYNKTGLSVGVPPCWGRILS 446          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: G0LAZ4_ZOBGA (Cyclomaltodextrinase, family GH13 n=2 Tax=Zobellia TaxID=112040 RepID=G0LAZ4_ZOBGA)

HSP 1 Score: 294 bits (753), Expect = 1.100e-94
Identity = 137/255 (53.73%), Postives = 179/255 (70.20%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
            + DF+  LA+FCK++NP+FWLMGEVV GDY  W N  MLDSVTNY+YHTP+YESFN +DFGKIS  ++  FG  GVYK   +Y+FVDNHDV+RAAS L +P HL+PLYLLLFTLPGIPAIYYGSEWGFEG+        LRP V   ++  LAKHP L+ +IK+F   R ++ AL +G YQ L VT +   F+R  ++  V+ +VNAS ++  + IP ++  A    DLL+ EY + +    L +E+P CWGR+L
Sbjct:  191 DFDFMKELALFCKRENPNFWLMGEVVHGDYNRWVNPFMLDSVTNYDYHTPIYESFNLKDFGKISETVEEDFGPKGVYKNRALYSFVDNHDVDRAASSLKKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGRKSLHSDELLRPSVKRNDLGKLAKHPKLLGAIKQFIVARKSSEALVKGSYQTLLVTGQYYAFSRKSDNKTVVVVVNASNRSARIHIPFKEPSAMVLTDLLSPEYSLTSDKTGLYVEVPPCWGRIL 445          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: A0A1N7IP63_9FLAO (Glycosidase n=1 Tax=Zobellia uliginosa TaxID=143224 RepID=A0A1N7IP63_9FLAO)

HSP 1 Score: 293 bits (749), Expect = 4.400e-94
Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSCWGRVL 765
            + DF+ ALA+FCKK+NP+FWLMGEVV GDY  W N  MLDSVTNY+YHTP+YESFN +DF KIS  +   FG  GVYK L +Y+FVDNHDV RAAS L +  HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRP V   ++   AKHP LI +IK+F A R ++ AL +G YQ L VT +   F+R   +  V+ +VNAS +   + IPL+   A  + DLL+ +Y + +    L +E+P CWGR+L
Sbjct:  191 DFDFMKALALFCKKENPNFWLMGEVVHGDYNRWVNPLMLDSVTNYDYHTPMYESFNLKDFSKISETVDGDFGPKGVYKDLALYSFVDNHDVNRAASTLKKAEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKKSPHSDDLLRPPVKRNDLGKQAKHPKLIAAIKQFIAVRKSSEALVKGAYQTLLVTRQHYAFSRESNNETVVVVVNASNKAARIHIPLKSPSATVFTDLLSPKYSLVSDKTGLYIEVPPCWGRIL 445          
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Match: UPI00188C3909 (alpha-amylase family glycosyl hydrolase n=2 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188C3909)

HSP 1 Score: 282 bits (721), Expect = 8.160e-90
Identity = 136/256 (53.12%), Postives = 178/256 (69.53%), Query Frame = 1
Query:    1 ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTPLYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSEPAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVDTLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNFVICMVNASRQTITLDIPLQQYEAEGYKDLLNT-EYIVKAQNGMLSLEIPSCWGRVL 765
            +  F+  L+ FCK +NP+FWLMGEVV G+Y  W     LDSVTNY+YHTP+YESFN  DF KI+ +L+RQFG  GVY  L++Y+FVDNHDV RAAS+L++P HL+PLYLLLFTLPGIPAIYYGSEWGFEGK        LRP V L +V   AKHP L+D+IK+F + R     L  G Y+ + V  EQ  F+R  +   +I ++N+S + ITL IPL    +  Y D+LN  + ++ ++ G LS+E+P CWGR+L
Sbjct:  191 DFGFMKELSSFCKSRNPNFWLMGEVVHGNYNRWITDAHLDSVTNYDYHTPIYESFNLSDFSKIAVILKRQFGPKGVYNNLSLYSFVDNHDVNRAASMLNKPEHLFPLYLLLFTLPGIPAIYYGSEWGFEGKRTAHSDEALRPCVQLDDVQEQAKHPKLLDAIKQFISVRKNCKNLVYGAYETVLVKKEQYAFSRKDKDKTMIVIINSSNKPITLKIPLNGMFSGTYIDILNEGDSLIPSKTG-LSVEVPPCWGRIL 445          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12987.1808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S9NTL7_9FLAO1.030e-12165.25Alpha-amylase n=1 Tax=Maribacter sp. MJ134 TaxID=2... [more]
UPI00188B6CAF8.160e-10056.25alpha-amylase family glycosyl hydrolase n=2 Tax=Zo... [more]
UPI001C06E31B5.250e-9955.29alpha-amylase family glycosyl hydrolase n=1 Tax=Zo... [more]
UPI001C07B7411.860e-9855.69alpha-amylase family glycosyl hydrolase n=1 Tax=Zo... [more]
A0A844N3V9_9FLAO3.000e-9753.91Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=... [more]
UPI001C0734A45.100e-9754.12alpha-amylase family glycosyl hydrolase n=1 Tax=Zo... [more]
A0A7X3D477_9FLAO8.500e-9754.30Alpha-amylase n=2 Tax=Zobellia TaxID=112040 RepID=... [more]
G0LAZ4_ZOBGA1.100e-9453.73Cyclomaltodextrinase, family GH13 n=2 Tax=Zobellia... [more]
A0A1N7IP63_9FLAO4.400e-9454.90Glycosidase n=1 Tax=Zobellia uliginosa TaxID=14322... [more]
UPI00188C39098.160e-9053.13alpha-amylase family glycosyl hydrolase n=2 Tax=Zo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12987contigE-siliculosus-1a_F_contig12987:2..787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size786
Model size786
Exons1
Hectar predicted targeting categoryother localisation
Seed eggNOG ortholog143224.JQMD01000002_gene3064
Seed ortholog evalue2.7e-79
Seed ortholog score302.0
Taxonomic scopeBacteria
BRITEko00000,ko00001,ko01000,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
CAZyGH13,GH31,GH77
COG Functional cat.G
EC2.4.1.25,2.4.1.4,3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.20,3.2.1.54,3.5.4.33
EggNOG OGs1HYB7@117743,4NEVK@976,COG0366@1,COG0366@2,COG3280@1,COG3280@2
EggNOG free text desc.alpha amylase, catalytic
KEGG Pathwayko00052,ko00500,ko01100,ko04973,map00052,map00500,map01100,map04973
KEGG ReactionR00028,R00801,R00802,R01823,R02108,R02112,R03122,R05196,R06087,R06088,R10223,R11262
KEGG koko:K00705,ko:K01176,ko:K01187,ko:K01208,ko:K05341,ko:K11991,ko:K21575
KEGG rclassRC00028,RC00049,RC00077,RC00477
Preferred namemalQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927816.8105693-CDS-E-siliculosus-1a_F_contig12987:1..7871622927816.8105693-CDS-E-siliculosus-1a_F_contig12987:1..787Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12987 2..787 +
1696318692.6698747-CDS-E-siliculosus-1a_F_contig12987:1..7871696318692.6698747-CDS-E-siliculosus-1a_F_contig12987:1..787Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12987 2..787 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12987.1808.1prot_E-siliculosus-1a_F_contig12987.1808.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12987 2..787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12987.1808.1

>prot_E-siliculosus-1a_F_contig12987.1808.1 ID=prot_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp
ELDFLAALAVFCKKKNPDFWLMGEVVFGDYKEWANSKMLDSVTNYEYHTP
LYESFNHRDFGKISRVLQRQFGADGVYKRLNMYTFVDNHDVERAASVLSE
PAHLYPLYLLLFTLPGIPAIYYGSEWGFEGKIRNGKHHELRPKVNLKNVD
TLAKHPLLIDSIKRFTAFRSTTNALSEGDYQELFVTNEQLVFARVKEHNF
VICMVNASRQTITLDIPLQQYEAEGYKDLLNTEYIVKAQNGMLSLEIPSC
WGRVLSPVNLS*
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mRNA from alignment at E-siliculosus-1a_F_contig12987:2..787+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12987.1808.1 ID=mRNA_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=786bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12987:2..787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGTTAGACTTTTTAGCGGCACTTGCTGTATTTTGTAAGAAGAAAAATCC TGATTTTTGGTTAATGGGTGAGGTAGTATTTGGTGATTATAAAGAATGGG CTAATTCAAAAATGCTCGACTCTGTTACTAATTACGAATATCATACTCCT TTATATGAAAGTTTTAATCACCGAGATTTTGGTAAGATCTCGAGGGTACT GCAACGGCAATTTGGTGCTGATGGGGTCTACAAAAGGTTAAATATGTATA CTTTTGTAGATAACCACGATGTAGAACGAGCAGCGAGTGTACTTTCAGAA CCTGCACATTTATATCCCTTATATCTTTTACTGTTTACCTTACCAGGTAT TCCTGCTATTTATTACGGCAGCGAATGGGGGTTCGAGGGTAAAATCAGAA ATGGAAAACATCACGAATTGAGACCTAAAGTAAATCTTAAAAATGTGGAT ACGCTTGCAAAGCATCCACTCTTAATTGATTCTATTAAAAGATTTACCGC ATTTCGAAGTACAACGAATGCCTTAAGTGAGGGAGATTATCAAGAGTTAT TTGTAACCAATGAACAGTTAGTGTTTGCTAGAGTAAAGGAACATAATTTT GTGATTTGCATGGTAAATGCTTCTCGACAGACAATTACACTTGATATTCC CTTACAGCAATATGAGGCCGAGGGTTATAAAGATCTATTGAATACGGAAT ATATAGTCAAAGCCCAAAATGGTATGTTGAGTCTTGAAATTCCGTCCTGT TGGGGCAGGGTATTGTCTCCTGTAAATCTATCTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12987:2..787+

>mRNA_E-siliculosus-1a_F_contig12987.1808.1 ID=mRNA_E-siliculosus-1a_F_contig12987.1808.1|Name=mRNA_E-siliculosus-1a_F_contig12987.1808.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12987:2..787+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGTTAGACTTTTTAGCGGCACTTGCTGTATTTTGTAAGAAGAAAAATCC
TGATTTTTGGTTAATGGGTGAGGTAGTATTTGGTGATTATAAAGAATGGG
CTAATTCAAAAATGCTCGACTCTGTTACTAATTACGAATATCATACTCCT
TTATATGAAAGTTTTAATCACCGAGATTTTGGTAAGATCTCGAGGGTACT
GCAACGGCAATTTGGTGCTGATGGGGTCTACAAAAGGTTAAATATGTATA
CTTTTGTAGATAACCACGATGTAGAACGAGCAGCGAGTGTACTTTCAGAA
CCTGCACATTTATATCCCTTATATCTTTTACTGTTTACCTTACCAGGTAT
TCCTGCTATTTATTACGGCAGCGAATGGGGGTTCGAGGGTAAAATCAGAA
ATGGAAAACATCACGAATTGAGACCTAAAGTAAATCTTAAAAATGTGGAT
ACGCTTGCAAAGCATCCACTCTTAATTGATTCTATTAAAAGATTTACCGC
ATTTCGAAGTACAACGAATGCCTTAAGTGAGGGAGATTATCAAGAGTTAT
TTGTAACCAATGAACAGTTAGTGTTTGCTAGAGTAAAGGAACATAATTTT
GTGATTTGCATGGTAAATGCTTCTCGACAGACAATTACACTTGATATTCC
CTTACAGCAATATGAGGCCGAGGGTTATAAAGATCTATTGAATACGGAAT
ATATAGTCAAAGCCCAAAATGGTATGTTGAGTCTTGAAATTCCGTCCTGT
TGGGGCAGGGTATTGTCTCCTGTAAATCTATCTTAAGAGTTAGACTTTTT
AGCGGCACTTGCTGTATTTTGTAAGAAGAAAAATCCTGATTTTTGGTTAA
TGGGTGAGGTAGTATTTGGTGATTATAAAGAATGGGCTAATTCAAAAATG
CTCGACTCTGTTACTAATTACGAATATCATACTCCTTTATATGAAAGTTT
TAATCACCGAGATTTTGGTAAGATCTCGAGGGTACTGCAACGGCAATTTG
GTGCTGATGGGGTCTACAAAAGGTTAAATATGTATACTTTTGTAGATAAC
CACGATGTAGAACGAGCAGCGAGTGTACTTTCAGAACCTGCACATTTATA
TCCCTTATATCTTTTACTGTTTACCTTACCAGGTATTCCTGCTATTTATT
ACGGCAGCGAATGGGGGTTCGAGGGTAAAATCAGAAATGGAAAACATCAC
GAATTGAGACCTAAAGTAAATCTTAAAAATGTGGATACGCTTGCAAAGCA
TCCACTCTTAATTGATTCTATTAAAAGATTTACCGCATTTCGAAGTACAA
CGAATGCCTTAAGTGAGGGAGATTATCAAGAGTTATTTGTAACCAATGAA
CAGTTAGTGTTTGCTAGAGTAAAGGAACATAATTTTGTGATTTGCATGGT
AAATGCTTCTCGACAGACAATTACACTTGATATTCCCTTACAGCAATATG
AGGCCGAGGGTTATAAAGATCTATTGAATACGGAATATATAGTCAAAGCC
CAAAATGGTATGTTGAGTCTTGAAATTCCGTCCTGTTGGGGCAGGGTATT
GTCTCCTGTAAATCTATCTTAA
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