mRNA_E-siliculosus-1a_F_contig12967.1799.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12967.1799.1
Unique NamemRNA_E-siliculosus-1a_F_contig12967.1799.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5KMA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA2_9PHAE)

HSP 1 Score: 758 bits (1956), Expect = 7.360e-275
Identity = 381/434 (87.79%), Postives = 385/434 (88.71%), Query Frame = 1
Query:    1 GRPQNADVSEGGHQHHKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGP--AMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPAPDSCGLHDDHRARGGGKVWKHHYRLAAANPSGQRDAYMLNEHWRSCFQDGVV 1296
            GRPQNADVSEGGHQHHKKHNKSGSSRDPPAHHARSTN KLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDV  GS                  GPREAWEACLSEGAVRP+AGAILNANTLWYACGRSDGDGRD                SLKNDDI CYRIKHGVPA+ISSGLGRFKGGDVKAATAGGATPR WAVGSGQGDAVEIFTN KAKRDDLSGDGHVTLARILYFFDH+GNRRPDSTPDAGP  AMEFVLAYEFVTCGSGRSKK DSVTQHPTYWLQ GVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSH PAPDSCGLHDDHRARGGGKVWKHHYRLA ANPSG RDAY+L EHWRS FQDGVV
Sbjct:   13 GRPQNADVSEGGHQHHKKHNKSGSSRDPPAHHARSTNAKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVGTGSTGGG--------------GPREAWEACLSEGAVRPSAGAILNANTLWYACGRSDGDGRD----------------SLKNDDIICYRIKHGVPAEISSGLGRFKGGDVKAATAGGATPRHWAVGSGQGDAVEIFTNHKAKRDDLSGDGHVTLARILYFFDHKGNRRPDSTPDAGPDSAMEFVLAYEFVTCGSGRSKKADSVTQHPTYWLQRGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHTPAPDSCGLHDDHRARGGGKVWKHHYRLAPANPSGPRDAYILKEHWRSSFQDGVV 416          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: D7FZ46_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ46_ECTSI)

HSP 1 Score: 758 bits (1958), Expect = 1.470e-269
Identity = 381/410 (92.93%), Postives = 388/410 (94.63%), Query Frame = 1
Query:    1 GRPQNADVSEGGHQHHKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPAPDSCGLHDDHRARGGGKVWKHHYRLAAANP 1230
            G  QNADVSEGGHQHHKKHNKSGSSRDPPAHHAR+TNTKLALMRLAT+ETYTATRYSYSKKT ITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAP+DVRAGSA      XXXXXXXXXX GPREAWEACLS+GAVRP+AGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKND+I C+RIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDW  GSGQGDAVEIFTNP AKRDDLSGDGHVTL RILYFFD EGNRRPDS PDAGPAMEFVLAYEFV CGSGRSKK DSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCP SSFATGVSH PAPDSCGLH DHRARGGGKVWKHHYRLAAANP
Sbjct:  306 GHHQNADVSEGGHQHHKKHNKSGSSRDPPAHHARNTNTKLALMRLATSETYTATRYSYSKKTMITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPNDVRAGSAGSGVAPXXXXXXXXXXGGPREAWEACLSKGAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDEIICHRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWVAGSGQGDAVEIFTNPMAKRDDLSGDGHVTLGRILYFFDLEGNRRPDSIPDAGPAMEFVLAYEFVACGSGRSKKADSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPASSFATGVSHTPAPDSCGLHADHRARGGGKVWKHHYRLAAANP 715          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5K7Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z2_9PHAE)

HSP 1 Score: 571 bits (1471), Expect = 8.370e-203
Identity = 290/328 (88.41%), Postives = 294/328 (89.63%), Query Frame = 1
Query:  313 MLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPAPDSCGLHDDHRARGGGKVWKHHYRLAAANPSGQRDAYMLNEHWRSCFQDGVV 1296
            MLAGQPHGSATWRATILRQDAAPDDV+AGSA   XXXXXXXXXXXXXXGPREAWEACLSE AVRP+AGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDI CYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTL+RILYF DHEGNRRPDSTPDAGPA+EFVL YEFVTCGSGRSKK DSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGV                       WKHHYRLAAANPSG RDAYMLNEHWR  FQDGVV
Sbjct:    1 MLAGQPHGSATWRATILRQDAAPDDVKAGSARGGXXXXXXXXXXXXXXGPREAWEACLSEDAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDIICYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLSRILYFVDHEGNRRPDSTPDAGPAVEFVLTYEFVTCGSGRSKKADSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGV-----------------------WKHHYRLAAANPSGLRDAYMLNEHWRISFQDGVV 305          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5JM61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM61_9PHAE)

HSP 1 Score: 568 bits (1464), Expect = 1.070e-197
Identity = 284/323 (87.93%), Postives = 289/323 (89.47%), Query Frame = 1
Query:   79 DPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPS 1047
            DPPAHHARSTNTKL LM+LATTETYTATRYSYSKKTKITET+TSGPGCQRVLQALDDS SGGITNVVDGTEGTKPTAAMLAGQPHGSAT     LR  AAP+DV  GS                  GPREAWEACLSEGAVRP+AGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDI CYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLA IL+FFDHEGNRRPDS PDAGPAMEFVLAYEFVTCGSGRSKK DSVTQHPTYWLQ GVKQVPS
Sbjct:  259 DPPAHHARSTNTKLPLMKLATTETYTATRYSYSKKTKITETLTSGPGCQRVLQALDDSRSGGITNVVDGTEGTKPTAAMLAGQPHGSAT----SLRGGAAPNDVGTGSTGGG--------------GPREAWEACLSEGAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDIICYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLASILHFFDHEGNRRPDSAPDAGPAMEFVLAYEFVTCGSGRSKKADSVTQHPTYWLQRGVKQVPS 563          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5JN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN94_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 7.840e-177
Identity = 279/414 (67.39%), Postives = 290/414 (70.05%), Query Frame = 1
Query:   22 VSEGGHQHHKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPAPDSCGLHDDHRARGGGKVWKHHYRLAAANPSGQRDAYMLNE 1263
            VSEGGH+HH+K N SGSSRDP AHHARST TKLALMRLAT+ET TATRY Y K TKIT+TVTSG GCQRVLQALDDSLSGG+  +VDGTEGTKPTAAM                                                  EAWEACLSEGAVRP+AG ILNANTL YA G SDGDGRDV  EL                                SGL R KGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNP AKRDDLSGDG VTL RILYF DHEGNRRPD+TP AGPAME VL YEFVTCGSGRSK+ DSVTQHPTYWLQGGVKQVPS Y IEAIRRHVMMYHH   SSFATGVSH PA DSC   DDH+ARGGG+  KHHYRLA AN SG RDAYMLNE
Sbjct:    9 VSEGGHEHHEKRNTSGSSRDPLAHHARSTYTKLALMRLATSETSTATRYFYFKNTKITDTVTSGLGCQRVLQALDDSLSGGMMKIVDGTEGTKPTAAM--------------------------------------------------EAWEACLSEGAVRPSAGGILNANTLRYANGHSDGDGRDVWNEL--------------------------------SGLARLKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPMAKRDDLSGDGDVTLGRILYF-DHEGNRRPDATPGAGPAMELVLPYEFVTCGSGRSKEADSVTQHPTYWLQGGVKQVPSDYLIEAIRRHVMMYHHRAASSFATGVSHTPASDSCRHRDDHKARGGGRFRKHHYRLAVANSSGPRDAYMLNE 339          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5K953_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K953_9PHAE)

HSP 1 Score: 511 bits (1316), Expect = 1.340e-169
Identity = 269/435 (61.84%), Postives = 308/435 (70.80%), Query Frame = 1
Query:    1 GRPQNADVSEGGHQHHKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQ-DAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPA-PDSCGLHDDHRARGGGKVWKHHYRLAAANP-SGQRDAYMLNEHWRSCFQDGVV 1296
            GRPQ+A+V E GHQ HK+  KS S+RDP AHHAR TNT LAL RL + E YTA RYSYS KTK+TE VTSGPGC+R+L AL D L GG+  VVD    T PTA+M  G+  GSA W+ATIL   D A  +   GS                  G +E WE C+SEG VRP+AGAIL AN  W++CGRSDG   D C + RC  CWEGG +SLK  +I+C R KHGVP K SSGLGRFKGGDVK ATA G TPR W VG G+G++VEIFT+P+AKR DLSGDGHVTL  ILYFFD +GN RP  T  A P ME+VL YE+VT G+GRSKK DSVT HPTYWLQGG  +VPSVYP++AIRRHV MYH CP S F    ++  A  ++CGL DD   +GG  VWKHHY LAAA P SGQRDAYMLNEHWR  FQDGVV
Sbjct:  584 GRPQDANVGEAGHQTHKRSRKSSSNRDPAAHHARRTNTFLALHRLTSPEPYTANRYSYSSKTKVTEQVTSGPGCRRILAALGDRLRGGLNGVVDADASTTPTASMKDGKYQGSAKWQATILGGGDLACSEDGGGSVAA---------------GAKEPWEVCVSEGPVRPHAGAILRANAEWFSCGRSDG-ALDDCADARCPLCWEGGHESLKARNISCSRFKHGVPPKTSSGLGRFKGGDVKKATATGPTPRHWCVGDGRGESVEIFTSPEAKRKDLSGDGHVTLGLILYFFDLDGNPRPGPTAAADPMMEYVLVYEYVTRGAGRSKKADSVTLHPTYWLQGGGNRVPSVYPVDAIRRHVHMYHLCPVSHFEPRAANTSALAETCGLRDDDTGKGG-NVWKHHYILAAAKPPSGQRDAYMLNEHWRGAFQDGVV 1001          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5K8R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R0_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 5.500e-150
Identity = 239/424 (56.37%), Postives = 275/424 (64.86%), Query Frame = 1
Query:   46 HKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDA-APDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEG-AVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATG-VSHIPAPDSCGLHDDHRARGGG-KVWKHHYRLAAA---NPSGQRDAYMLNEHWRSCFQDGVV 1296
            HK  +KS SSRDPPA+HAR  NT LAL RL T E +TATRYSY+ K+K+T+TVTSG GCQRVL+A+   L  G+ +V D T G  PTAA    Q  GSA W +++L  +   P+    GSA                 GP+E WEAC++    +RP    IL A  +WY CG   GD   VC ELRC  CWEGGG  L N +I+C RIKHGVPAK SSG+  FKGGDVKAAT  G +PRDWAVG+G G  VEIFT PKA+ DDLSGDG VTL +ILYFF+   NRRP  +   GPAME VL YE+VTCG GRSKKED  T+HPTYWLQGG    PS +P+EA RRHV M H  P SSF  G +  I    SC L  D  A+G G KVWKHHY LA A      G RDAYM NEHWR  FQDGVV
Sbjct:    2 HKSGSKSDSSRDPPAYHARRANTFLALARLTTPEPHTATRYSYATKSKVTKTVTSGSGCQRVLKAVGSMLQVGMAHVEDATVGVVPTAAASTAQHQGSARWESSVLPDEPLVPNHSHLGSAGK---------------GPKEPWEACMAGADGIRPRKERILAAARIWYGCGSGKGDLSAVCSELRCPCCWEGGGGKLDNSNISCSRIKHGVPAKSSSGMCYFKGGDVKAATNEGTSPRDWAVGAGGGQDVEIFTTPKAREDDLSGDGGVTLGKILYFFNVNLNRRPGCSAP-GPAMECVLVYEYVTCGLGRSKKEDLATKHPTYWLQGGAATTPSDFPVEAFRRHVHMNHLYPTSSFEGGRIDDISESKSCELRMDDTAKGAGSKVWKHHYNLATAPRDRRHGHRDAYMRNEHWRGAFQDGVV 409          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5K4J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J5_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 1.090e-91
Identity = 153/240 (63.75%), Postives = 167/240 (69.58%), Query Frame = 1
Query:  565 GDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFFDHEGNRRPD-STPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATG-VSHIPAPDSCGLHDDHRARGGG-KVWKHHYRLAAA---NPSGQRDAYMLNEH 1266
            GD   VC ELRC  CWEGGG  L N +I+C RIKHGVPAK SSG+   KGGDVKAAT  GA PRDWAVG+G G  VEIFT PKA+ DDLSG G VTL +ILY FD   NRRP  S PD  PAME VL YE+VT G GRSKKED  T+HP+YWLQGG    PSV+P+EAIRRHV MYH CP SSF  G +       SCGL  D  A+G G KVWKHHY LA A      G RDAY+LNEH
Sbjct:  187 GDLSAVCSELRCPCCWEGGGGKLDNSNISCSRIKHGVPAKSSSGMCYSKGGDVKAATNEGANPRDWAVGAGGGQDVEIFTTPKAREDDLSGGGDVTLGKILYLFDLNLNRRPGCSAPD--PAMECVLVYEYVTRGVGRSKKEDLATKHPSYWLQGGAATTPSVFPVEAIRRHVHMYHLCPTSSFEGGRIDDTSESQSCGLRMDDMAKGSGAKVWKHHYNLATAPRDRRHGHRDAYLLNEH 424          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5JRL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL1_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.970e-65
Identity = 155/430 (36.05%), Postives = 211/430 (49.07%), Query Frame = 1
Query:   16 ADVSEGGHQHHKKHNKSGSSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRD-WAVGSGQGDAVEIFTNPKAKRDDLSGD-GHVTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPG-SSFATGVSHIPAPDSCGLHDDHRARGGGKVWKHHYRLAAANPSGQRDAYMLNEHWRSCFQDGVV 1296
            A   E  HQ +K  NKS   R+PP H+ +  N   AL+ LA    Y+ T ++   K     +V+ G GC R++  L  +L G      D       T A L GQ  GSA W A + ++D  P+                            +W A +S G  RP+  A++     ++ CG  DG     C  +RC  CW+    SL++  I C R    VP   S G+GR +GGD KAA   G  PRD WA+G GQG+ VEIF  P    DD+S     +T+++I+YFFDH+GN+   S  +  P+  +VLAY++V  G+G  +  DSVT+HPT  LQG  +  P VYP++AIRR V MYH CP  S   +  S I     CG      + G  +VW H +RLA        D Y+LNE   S  QD  V
Sbjct:   17 ASPGEFAHQQNKSGNKSDCGRNPPKHYVKRANVNAALLALANGLEYSVTTFNRRTKEHEVISVSPGAGCIRLMNYLAPTL-GHDRVPTDAHASAIQTPAQLKGQFPGSAVWSAHLFKEDGVPN-------------------------VNGSWSARISSGNFRPDEAALIRGYQRYFGCGGGDGG----CGNVRCPYCWDES-TSLESTLIECSRYMR-VPQVASCGVGRLRGGDAKAAARVG--PRDDWALGQGQGNDVEIFNKPPPTGDDVSPSVDDLTMSKIIYFFDHKGNKNSFSG-EPRPSTWWVLAYDYVGIGNGNERVPDSVTRHPTLSLQGRGR--PKVYPVQAIRRQVHMYHQCPQHSDVGSSTSQI-----CGESQGPYSGGRDRVWHHRFRLALPGSRNGYDRYLLNEVHHSTNQDTFV 404          
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Match: A0A6H5K8J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J7_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.090e-59
Identity = 141/397 (35.52%), Postives = 200/397 (50.38%), Query Frame = 1
Query:   70 SSRDPPAHHARSTNTKLALMRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNV-VDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAP--DDVRAGSAXXXXXXXXXXXXXXXXXGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGH---VTLARILYFFDHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQGGVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPA-------PDSCGLHDDHRARGGGKVWKHHYRLAA 1221
            S R+  AH+AR  N  LA+  LA    +  TR+       + ETV +G GC  VL +L + L GG+++   D    + PTAA  A Q  G+ATW  ++L +  +P  +D   G                        WE+ ++ G +RP+   ++ A   +++CGR+DG    +C+E RC+ CW     +L + DI C R KHG P +  SGLGR+KG DV+A+T   A   DW +G G G+ VE F       D   G      ++LARILY  +H GN R  S     P   +VLA+++V+ G G  +  D VT HP   L+G  ++ P V+P   IRRHV MYH CPG        H PA       P+ CG       R G +VW+H +RLA+
Sbjct:   92 SGRNAAAHYARRFNMGLAIDALAEEIPWEVTRFDRGLMKYVVETVKAGSGCSAVLWSLGNVLPGGLSSTPTDARAASTPTAAQRAAQFPGAATWT-SVLWEAGSPWGNDASGGG-----------------------WESRIATGPLRPDEKTLIGAYNTYFSCGRADGGA--LCEEPRCADCWLNS-STLDDKDIICTRFKHGAPLRAGSGLGRWKGDDVRASTRT-APGGDWWLGEGCGEDVEFFKEQPFDDDVHDGPAQASGLSLARILYLLEHRGNTRQGSHDH--PLTSWVLAFDYVSDGVGNQRSPDPVTLHPVLVLRG--RRRPVVFPSAEIRRHVHMYHRCPGPE------HPPADREWMYGPERCG-------RSGRQVWRHKFRLAS 443          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12967.1799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KMA2_9PHAE7.360e-27587.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ46_ECTSI1.470e-26992.93Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z2_9PHAE8.370e-20388.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM61_9PHAE1.070e-19787.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JN94_9PHAE7.840e-17767.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K953_9PHAE1.340e-16961.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8R0_9PHAE5.500e-15056.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4J5_9PHAE1.090e-9163.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL1_9PHAE2.970e-6536.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8J7_9PHAE2.090e-5935.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12967contigE-siliculosus-1a_F_contig12967:32..1355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1173
Model size1324
Exons1
Ec32 orthologEc-00_004500.1
Ec32 ortholog descriptionhypothetical protein
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12967.1799.1prot_E-siliculosus-1a_F_contig12967.1799.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12967 158..1330 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927815.118093-UTR-E-siliculosus-1a_F_contig12967:31..1571622927815.118093-UTR-E-siliculosus-1a_F_contig12967:31..157Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12967 32..157 +
1696318691.8289688-UTR-E-siliculosus-1a_F_contig12967:31..1571696318691.8289688-UTR-E-siliculosus-1a_F_contig12967:31..157Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12967 32..157 +
1622927815.1435745-UTR-E-siliculosus-1a_F_contig12967:1330..13551622927815.1435745-UTR-E-siliculosus-1a_F_contig12967:1330..1355Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12967 1331..1355 +
1696318691.8452368-UTR-E-siliculosus-1a_F_contig12967:1330..13551696318691.8452368-UTR-E-siliculosus-1a_F_contig12967:1330..1355Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12967 1331..1355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927815.1299076-CDS-E-siliculosus-1a_F_contig12967:157..13301622927815.1299076-CDS-E-siliculosus-1a_F_contig12967:157..1330Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12967 158..1330 +
1696318691.8367667-CDS-E-siliculosus-1a_F_contig12967:157..13301696318691.8367667-CDS-E-siliculosus-1a_F_contig12967:157..1330Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12967 158..1330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12967.1799.1

>prot_E-siliculosus-1a_F_contig12967.1799.1 ID=prot_E-siliculosus-1a_F_contig12967.1799.1|Name=mRNA_E-siliculosus-1a_F_contig12967.1799.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=391bp
MRLATTETYTATRYSYSKKTKITETVTSGPGCQRVLQALDDSLSGGITNV
VDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVRAGSARGGAAPD
DVGTGSTGGGGPREAWEACLSEGAVRPNAGAILNANTLWYACGRSDGDGR
DVCKELRCSSCWEGGGKSLKNDDITCYRIKHGVPAKISSGLGRFKGGDVK
AATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLARILYFF
DHEGNRRPDSTPDAGPAMEFVLAYEFVTCGSGRSKKEDSVTQHPTYWLQG
GVKQVPSVYPIEAIRRHVMMYHHCPGSSFATGVSHIPAPDSCGLHDDHRA
RGGGKVWKHHYRLAAANPSGQRDAYMLNEHWRSCFQDGVV*
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mRNA from alignment at E-siliculosus-1a_F_contig12967:32..1355+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12967.1799.1 ID=mRNA_E-siliculosus-1a_F_contig12967.1799.1|Name=mRNA_E-siliculosus-1a_F_contig12967.1799.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1324bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12967:32..1355+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGGCGCCCTCAGAATGCAGACGTCAGCGAGGGAGGACACCAACACCACAA GAAACACAACAAGTCAGGTAGCTCACGAGACCCGCCGGCACACCACGCGA GGAGTACGAACACCAAGCTGGCGCTCATGAGGTTGGCTACAACCGAGACC TACACCGCAACCCGGTACTCCTACTCCAAAAAGACTAAGATTACCGAGAC GGTGACCTCTGGGCCCGGTTGCCAGCGCGTCCTACAGGCCCTCGACGACA GCCTCTCGGGAGGGATAACGAACGTTGTCGATGGCACCGAGGGCACGAAA CCGACGGCAGCAATGTTGGCGGGGCAGCCCCACGGCTCAGCCACTTGGCG TGCGACAATCTTGCGTCAAGATGCCGCGCCCGACGACGTCAGAGCCGGAT CAGCACGCGGTGGGGCCGCGCCCGACGACGTCGGAACCGGATCAACAGGC GGTGGGGGGCCGAGGGAGGCGTGGGAAGCGTGTTTGAGCGAAGGTGCCGT ACGTCCCAACGCGGGGGCCATCCTGAACGCCAATACCCTGTGGTATGCCT GCGGCCGCTCCGACGGTGACGGCCGTGACGTCTGCAAAGAGCTGAGGTGC TCGTCCTGCTGGGAGGGGGGAGGGAAGAGTCTGAAAAATGACGACATCAC CTGCTATCGGATCAAGCACGGCGTGCCTGCTAAGATCAGCAGCGGGCTGG GGCGGTTCAAGGGGGGCGACGTGAAGGCCGCAACCGCGGGCGGGGCAACC CCGCGCGACTGGGCGGTGGGCAGCGGGCAAGGAGACGCTGTAGAAATCTT TACGAACCCCAAGGCCAAGAGAGACGACCTGAGCGGTGACGGTCATGTCA CGTTGGCAAGGATCTTGTACTTCTTCGACCACGAGGGCAACAGACGCCCT GACTCCACCCCTGACGCGGGCCCCGCGATGGAGTTTGTCCTCGCGTACGA GTTCGTCACTTGTGGGTCTGGACGGTCCAAGAAAGAAGATTCCGTCACAC AGCACCCCACCTACTGGCTGCAGGGAGGGGTTAAGCAGGTTCCGTCAGTC TACCCGATTGAAGCCATTCGCAGGCATGTCATGATGTACCACCACTGCCC GGGGTCGAGCTTCGCCACCGGGGTCAGTCACATTCCAGCGCCCGACTCTT GCGGACTTCACGATGATCACAGAGCGAGAGGGGGGGGGAAGGTTTGGAAG CACCACTACAGGCTAGCAGCGGCCAATCCCAGCGGGCAACGGGACGCGTA CATGCTGAACGAGCACTGGCGGAGTTGTTTTCAGGACGGTGTTGTCTGAG ACAAGATGTGGGCTAGTCAGAGGT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12967:32..1355+

>mRNA_E-siliculosus-1a_F_contig12967.1799.1 ID=mRNA_E-siliculosus-1a_F_contig12967.1799.1|Name=mRNA_E-siliculosus-1a_F_contig12967.1799.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2346bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12967:32..1355+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGGTTGGCTACAACCGAGACCTACACCGCAACCCGGTACTCCTACTC
CAAAAAGACTAAGATTACCGAGACGGTGACCTCTGGGCCCGGTTGCCAGC
GCGTCCTACAGGCCCTCGACGACAGCCTCTCGGGAGGGATAACGAACGTT
GTCGATGGCACCGAGGGCACGAAACCGACGGCAGCAATGTTGGCGGGGCA
GCCCCACGGCTCAGCCACTTGGCGTGCGACAATCTTGCGTCAAGATGCCG
CGCCCGACGACGTCAGAGCCGGATCAGCACGCGGTGGGGCCGCGCCCGAC
GACGTCGGAACCGGATCAACAGGCGGTGGGGGGCCGAGGGAGGCGTGGGA
AGCGTGTTTGAGCGAAGGTGCCGTACGTCCCAACGCGGGGGCCATCCTGA
ACGCCAATACCCTGTGGTATGCCTGCGGCCGCTCCGACGGTGACGGCCGT
GACGTCTGCAAAGAGCTGAGGTGCTCGTCCTGCTGGGAGGGGGGAGGGAA
GAGTCTGAAAAATGACGACATCACCTGCTATCGGATCAAGCACGGCGTGC
CTGCTAAGATCAGCAGCGGGCTGGGGCGGTTCAAGGGGGGCGACGTGAAG
GCCGCAACCGCGGGCGGGGCAACCCCGCGCGACTGGGCGGTGGGCAGCGG
GCAAGGAGACGCTGTAGAAATCTTTACGAACCCCAAGGCCAAGAGAGACG
ACCTGAGCGGTGACGGTCATGTCACGTTGGCAAGGATCTTGTACTTCTTC
GACCACGAGGGCAACAGACGCCCTGACTCCACCCCTGACGCGGGCCCCGC
GATGGAGTTTGTCCTCGCGTACGAGTTCGTCACTTGTGGGTCTGGACGGT
CCAAGAAAGAAGATTCCGTCACACAGCACCCCACCTACTGGCTGCAGGGA
GGGGTTAAGCAGGTTCCGTCAGTCTACCCGATTGAAGCCATTCGCAGGCA
TGTCATGATGTACCACCACTGCCCGGGGTCGAGCTTCGCCACCGGGGTCA
GTCACATTCCAGCGCCCGACTCTTGCGGACTTCACGATGATCACAGAGCG
AGAGGGGGGGGGAAGGTTTGGAAGCACCACTACAGGCTAGCAGCGGCCAA
TCCCAGCGGGCAACGGGACGCGTACATGCTGAACGAGCACTGGCGGAGTT
GTTTTCAGGACGGTGTTGTCTGAATGAGGTTGGCTACAACCGAGACCTAC
ACCGCAACCCGGTACTCCTACTCCAAAAAGACTAAGATTACCGAGACGGT
GACCTCTGGGCCCGGTTGCCAGCGCGTCCTACAGGCCCTCGACGACAGCC
TCTCGGGAGGGATAACGAACGTTGTCGATGGCACCGAGGGCACGAAACCG
ACGGCAGCAATGTTGGCGGGGCAGCCCCACGGCTCAGCCACTTGGCGTGC
GACAATCTTGCGTCAAGATGCCGCGCCCGACGACGTCAGAGCCGGATCAG
CACGCGGTGGGGCCGCGCCCGACGACGTCGGAACCGGATCAACAGGCGGT
GGGGGGCCGAGGGAGGCGTGGGAAGCGTGTTTGAGCGAAGGTGCCGTACG
TCCCAACGCGGGGGCCATCCTGAACGCCAATACCCTGTGGTATGCCTGCG
GCCGCTCCGACGGTGACGGCCGTGACGTCTGCAAAGAGCTGAGGTGCTCG
TCCTGCTGGGAGGGGGGAGGGAAGAGTCTGAAAAATGACGACATCACCTG
CTATCGGATCAAGCACGGCGTGCCTGCTAAGATCAGCAGCGGGCTGGGGC
GGTTCAAGGGGGGCGACGTGAAGGCCGCAACCGCGGGCGGGGCAACCCCG
CGCGACTGGGCGGTGGGCAGCGGGCAAGGAGACGCTGTAGAAATCTTTAC
GAACCCCAAGGCCAAGAGAGACGACCTGAGCGGTGACGGTCATGTCACGT
TGGCAAGGATCTTGTACTTCTTCGACCACGAGGGCAACAGACGCCCTGAC
TCCACCCCTGACGCGGGCCCCGCGATGGAGTTTGTCCTCGCGTACGAGTT
CGTCACTTGTGGGTCTGGACGGTCCAAGAAAGAAGATTCCGTCACACAGC
ACCCCACCTACTGGCTGCAGGGAGGGGTTAAGCAGGTTCCGTCAGTCTAC
CCGATTGAAGCCATTCGCAGGCATGTCATGATGTACCACCACTGCCCGGG
GTCGAGCTTCGCCACCGGGGTCAGTCACATTCCAGCGCCCGACTCTTGCG
GACTTCACGATGATCACAGAGCGAGAGGGGGGGGGAAGGTTTGGAAGCAC
CACTACAGGCTAGCAGCGGCCAATCCCAGCGGGCAACGGGACGCGTACAT
GCTGAACGAGCACTGGCGGAGTTGTTTTCAGGACGGTGTTGTCTGA
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