mRNA_E-siliculosus-1a_F_contig1288.1759.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI) HSP 1 Score: 497 bits (1280), Expect = 1.750e-166 Identity = 287/326 (88.04%), Postives = 288/326 (88.34%), Query Frame = 1
Query: 1006 MAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGRDQDNARGSSNYNGRASQQESETQEKDDSEPSAPEAAEDDPYQCFAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRRWHDLVS 1983
MAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQA LRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQG DQDN RGSSNYNG+ASQQESETQEK DPYQCFA XXXXXXXXXXXXXXXXXX EGRRWHDLVS
Sbjct: 1 MAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQA---------LRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGPDQDNVRGSSNYNGQASQQESETQEKXXXXXXXXXXXXXDPYQCFA-XXXXXXXXXXXXXXXXXXXXVPAGSGRGEEEEGRRWHDLVS 316
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE) HSP 1 Score: 370 bits (951), Expect = 1.900e-118 Identity = 209/264 (79.17%), Postives = 213/264 (80.68%), Query Frame = 1
Query: 1207 MEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHF-----ALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGRDQDNARGSSNYNGRASQQESETQEKDDSEPSAPEAAEDDPYQCFAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRRWHDLVS 1983
ME+PIEEKISACRDFRQ GNLFHAEGQ G+ ALIYYDFCFPD+DSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCC L HF ALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGE IFGKEQGRDQDNARGSS NGRA QQESETQEKD SEPSA EAAEDDPYQCFAPAA EGRRWHDL+S
Sbjct: 1 MEVPIEEKISACRDFRQGGNLFHAEGQ---GSA----ALIYYDFCFPDDDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCPLAHFLGRARALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGSSGNNGRALQQESETQEKDGSEPSAVEAAEDDPYQCFAPAAAVGGNESGGGYAVTAAVVPAGSGSGKE--EGRRWHDLIS 255
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.100e-44 Identity = 99/222 (44.59%), Postives = 134/222 (60.36%), Query Frame = 1
Query: 1063 WTHTYDKWDGWEDPDELAKK-REEEEKRAKSYRENHMA--CAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALA----QRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 1707
WT TY WD WEDP++ A+ ++ EK ++ R ++ C+HD SAE+++M++ EK++AC FR +GN F EGQY+R LQYRQALIY D+ FPD Q LDD+R ACLLNSAACF+ GEL + L+ C QA L+ P KALYRRA VYRL+D F A DL A + + LR E +L+++ Y +A+G Q+FG
Sbjct: 21 WTRTYSYWDRWEDPEQGARPAKDNAEKTDRAARSQALSGCCSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAACFVRAGELGEALEACEQA---------LQERPRCAKALYRRAQVYRLKDEFALAKADLAAAXXXXXPRAADAAALRHERMMLRARETCYGANARALGRQMFG 233
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A7S2HHR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHR7_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.030e-41 Identity = 96/215 (44.65%), Postives = 137/215 (63.72%), Query Frame = 1
Query: 1063 WTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQEL-DDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 1704
W+ Y ++DG+ D +E A+ E+E ++A + R +C+HD S ER+V E+P+++KI A F RGN+ EGQY + QY+ A++YY++ FPDE S + ++ + IR C LNSAAC + G D+ L+ CYQ LR EP NVKALYRRA +YR+RD+F EA DL A + PN+V LR+E L +KI SYR +R+AM + IF
Sbjct: 9 WSQKYREFDGFIDHEEQAQIEEQERQKATAQRPG-TSCSHDHSRERQVYELPLDKKIEAMDRFHLRGNILFDEGQYEMASEQYKSAMVYYEYTFPDEGSDEWDVVNRIRLVCNLNSAACNMKAGLYDEALNNCYQV---------LREEPLNVKALYRRAQMYRIRDQFSEAKADLLLAWRELPNDVQLRQEYLTLSNKIKSYRRKREAMAKHIF 213
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: K3WFS9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFS9_GLOUD) HSP 1 Score: 161 bits (407), Expect = 5.740e-40 Identity = 89/225 (39.56%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 1042 ARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKAL----AQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 1704
A+ + WT TY+KWD WEDP+ELA++ +E +R++ + C HD SAE+K+M+M +EK+ AC +FRQ GNLF GQY+R A Y +AL+Y+++ FPD D++ + D ++ LLN AAC L G L+ + QA L + NVKALYRRA +RLRD F A D+ +A+ A+ ++ +L +E A+L++K+ +Y+ + K + +F
Sbjct: 52 AKHERFDWTKTYEKWDAWEDPEELARQEQEARERSERVAREQLGCNHDHSAEQKLMDMMTQEKLDACDEFRQLGNLFFQHGQYQRAAYHYHKALVYFEYIFPDTDAETEHHDALKLKVLLNFAACRLKTGHLEDVVQHADQA---------LALDVANVKALYRRAQAHRLRDDFDRAMQDINRAIEIAQAEDASDPLLVQEKALLQAKMLAYKLKSKQVSSAMF 267
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.840e-40 Identity = 92/232 (39.66%), Postives = 140/232 (60.34%), Query Frame = 1
Query: 1033 GDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQR-------PNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 1707
G+ A WT TY+KWD WEDP+ELA++ + +R++ + M C HD SAE+K+M+M +EK++AC +FR GNLF GQY+R A Y +AL+Y+++ FPD + + + D ++ LLN AAC L LD + QA L+ +P+NVKALYRRA YRL+D F+ AS D+ +AL ++ +L +E A+L++K+ +Y+ R K + +FG
Sbjct: 88 GEEAGSSPYDWTRTYEKWDAWEDPEELARQEQAARERSERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAACRLKTLHLDDAIHHANQA---------LQLDPDNVKALYRRAQAYRLKDEFELASQDISRALELSGTSENAPTSDPLLVQEKALLQAKMLAYKLRTKQVSTAMFG 310
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A024UUC7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUC7_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.080e-38 Identity = 91/217 (41.94%), Postives = 131/217 (60.37%), Query Frame = 1
Query: 1063 WTHTYDKWDGWEDPDELAKKREEEEKRAKSYREN-HMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGK 1710
WT Y++W WEDPDELA K E R KS R N +C HD SAE+K+M+M K+ C FR+ GN F A GQY+R A + AL+Y+++ F D D++Q E+DD+++ LLN A C + +DQ + L AL+ + ++VKALY RA+ YR++D+F+ A DL +ALA P + L +E VL +K A+Y + K +G +FGK
Sbjct: 60 WTREYERWSAWEDPDELAAK--EHAAREKSERANARTSCNHDHSAEQKLMDMSTRVKLDKCDTFRRLGNRFFAHGQYQRAAYHFHHALVYFEYIFADTDAEQDEMDDLKKRTLLNFALCRIKTKHVDQAV---------LHASLALKLDEDSVKALYIRAMGYRMQDKFELAQADLDRALALAPQDAALIQEKHVLVAKRAAYAVKSKQLGVAMFGK 265
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: W4H9A9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9A9_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.030e-38 Identity = 92/219 (42.01%), Postives = 132/219 (60.27%), Query Frame = 1
Query: 1063 WTHTYDKWDGWEDPDELAKKREEEEKRAKSYREN-HMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQ 1716
WT Y+KW WEDPDELA K E R KS R + +C HD SAE+K+M+M K++ C FR+ GN F A GQY+R A + AL+Y+++ F D D++Q E+DD+++ LLN A C L +DQ + L A++ + +VKALY RA+ YR++D+F+ A VDL +ALA P + L E VL +K A+Y + K +G +FG+ Q
Sbjct: 60 WTREYEKWSAWEDPDELAAK--EHAARVKSERASMRTSCNHDHSAEQKLMDMTTRAKLTQCDTFRRLGNRFFAHGQYQRAAYHFHHALVYFEYIFSDTDAEQVEMDDLKKRILLNFALCRLKTKHVDQAI---------LNASLAMKLDGESVKALYIRAMGYRMQDKFELAQVDLDRALALAPQDSALVHEKHVLAAKKAAYVVKSKQLGAAMFGRNQ 267
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A2D4CGS1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGS1_PYTIN) HSP 1 Score: 152 bits (384), Expect = 1.980e-37 Identity = 92/229 (40.17%), Postives = 130/229 (56.77%), Query Frame = 1
Query: 1006 MAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMA----CAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALA---QRPNEVMLRKESAVLKSKIASYR 1671
M A +G AR D WT Y+KWD WEDP+ELA++ E+ R K A C HD S E+++M+M EK++AC +FR+ GNLF +GQY+R A Y +AL+Y+++ FPD D + + D +R LLN AAC L G LD L T ALR +P N KAL+RRA +RLRD F A+ DL ALA + + +E +L++++ +Y+
Sbjct: 50 MTATATPNGSAVARSD---WTSVYEKWDAWEDPEELAQR--EQAAREKXXXAARAAAQGPCNHDHSTEQRLMDMTTTEKLTACDEFRRLGNLFFEQGQYQRAAYHYHKALVYFEYVFPDTDDENEAFDSLRLKTLLNFAACRLHTGHLDDVLS---------HTEQALRLDPTNAKALFRRAQAWRLRDEFARATEDLNAALAVAGAAADRAAILQEKTLLQARVLAYK 264
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Match: A0A6G0XP24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP24_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.940e-37 Identity = 88/215 (40.93%), Postives = 135/215 (62.79%), Query Frame = 1
Query: 1063 WTHTYDKWDGWEDPDELAKKREEEEKRAKSYR-ENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLTHFALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 1704
WT Y+KW WEDP+ELA K E+E R KS R + +C HD SAE+K+M+M ++K+ C FR+ GN F A GQY+R A Y +ALIY+++ F D D +Q ++DD+++ LLN A C + D+++ + A+ AL+ + ++VKALY RA+ YR++D+F A DL +AL+ P++ L E +L +K A+YR + K +G +F
Sbjct: 60 WTRNYEKWQAWEDPEELAAK--EKELRDKSERAQMRTSCNHDHSAEQKLMDMSTQDKLIKCDAFRRLGNRFFAHGQYQRAAYHYHRALIYFEYVFCDTDDEQHQMDDLKKRALLNFALCRIKTKHTDESI---HHAT------LALKLDADSVKALYIRAMGYRMQDKFDLAQGDLDRALSLAPDDAALIHEKHILTAKKAAYRVKSKQLGAAMF 263 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1288.1759.1 >prot_E-siliculosus-1a_F_contig1288.1759.1 ID=prot_E-siliculosus-1a_F_contig1288.1759.1|Name=mRNA_E-siliculosus-1a_F_contig1288.1759.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=363bp MGGVRPQSSSLSHETMAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDEback to top mRNA from alignment at E-siliculosus-1a_F_contig1288:11105..19261+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1288.1759.1 ID=mRNA_E-siliculosus-1a_F_contig1288.1759.1|Name=mRNA_E-siliculosus-1a_F_contig1288.1759.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8157bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1288:11105..19261+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1288:11105..19261+ >mRNA_E-siliculosus-1a_F_contig1288.1759.1 ID=mRNA_E-siliculosus-1a_F_contig1288.1759.1|Name=mRNA_E-siliculosus-1a_F_contig1288.1759.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2178bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1288:11105..19261+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |