mRNA_E-siliculosus-1a_F_contig12856.1745.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: H0IZ60_9GAMM (Uncharacterized protein n=9 Tax=Halomonas TaxID=2745 RepID=H0IZ60_9GAMM) HSP 1 Score: 323 bits (827), Expect = 4.210e-110 Identity = 164/172 (95.35%), Postives = 167/172 (97.09%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGH TPEV IYS+RDVPEENEPNDGITLVMANHVELLPSLG DHDLDLLARHSESDLMACRERSL+EGIEV+DAIWARLK LAHRILV SSEASRGGAGAGVNDND
Sbjct: 84 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHPTPEVCIYSVRDVPEENEPNDGITLVMANHVELLPSLGEDHDLDLLARHSESDLMACRERSLKEGIEVDDAIWARLKALAHRILVESSEASRGGAGAGVNDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A1P8R7S4_9GAMM (Uncharacterized protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1P8R7S4_9GAMM) HSP 1 Score: 317 bits (811), Expect = 1.150e-107 Identity = 157/172 (91.28%), Postives = 169/172 (98.26%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RSISLATELG+AKARARGLSVVKIRRCHNRQLIMGYL+RLAGRGINITAFWRNAQEPLTEQVVGFRAGH+TPEVRIYS+RDVPEE+EPNDGITLVMANHVELLPSLG DHDLDLLARHSES L+ACR+++LQ+GIEV+DAIWARLKTLAHR+LV SSEASRGGAGAGVNDND
Sbjct: 84 RSISLATELGYAKARARGLSVVKIRRCHNRQLIMGYLARLAGRGINITAFWRNAQEPLTEQVVGFRAGHATPEVRIYSVRDVPEESEPNDGITLVMANHVELLPSLGADHDLDLLARHSESALLACRQQALQDGIEVDDAIWARLKTLAHRLLVESSEASRGGAGAGVNDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A1J0VFH0_9GAMM (Uncharacterized protein n=12 Tax=Halomonas TaxID=2745 RepID=A0A1J0VFH0_9GAMM) HSP 1 Score: 303 bits (776), Expect = 2.440e-102 Identity = 150/172 (87.21%), Postives = 164/172 (95.35%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYL+RLAGRG+NITAFWRNAQ PLTEQVVGFRAGH+TPEVR+YS+R+VPEENEPNDGITLVMANHVELLPSLG HDLDLLA H ES+L+ACR+++L+EGIEV+DAIW RLKTLAHRILV SSEASRGGAGAG +DND
Sbjct: 84 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLARLAGRGMNITAFWRNAQVPLTEQVVGFRAGHATPEVRVYSVREVPEENEPNDGITLVMANHVELLPSLGAGHDLDLLAHHPESELLACRQQALREGIEVDDAIWGRLKTLAHRILVESSEASRGGAGAGDHDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: UPI001D0B611D (DUF3726 domain-containing protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI001D0B611D) HSP 1 Score: 267 bits (683), Expect = 3.410e-88 Identity = 128/172 (74.42%), Postives = 153/172 (88.95%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RS SLA ELGFAKARARGL+++KIRRCHNRQLIMGYLSRLAGRG+N+TAFWRNAQ PLTEQVVGFRA + PE+R+Y++ +VPEENEPNDGITLV+ANHV+LLP++ D+ ++LAR ES+L+ACRER+ EGI+V+DA+W RLKTLA RILV SS+ASRGGAGAG NDND
Sbjct: 84 RSSSLAVELGFAKARARGLAIIKIRRCHNRQLIMGYLSRLAGRGMNVTAFWRNAQMPLTEQVVGFRANSTVPEIRVYAVHEVPEENEPNDGITLVLANHVDLLPAMRSDYHYEVLARQEESELLACRERAFAEGIDVDDALWQRLKTLASRILVESSDASRGGAGAGTNDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A1G9P4S2_9GAMM (Malate/L-lactate dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1G9P4S2_9GAMM) HSP 1 Score: 261 bits (668), Expect = 5.890e-86 Identity = 128/172 (74.42%), Postives = 149/172 (86.63%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RS SLA ELGFAKARARGL+V+KIR CHNRQLIMGYL+RLAGRG+N+TAFWRNAQ PLTEQVVGFRA PE+R+Y++ DVPEENEPNDGITLVMANHV+LLPS+ + DLLARH ESDL+ACR ++L EGI V++A+W+RLK LA R+LV SSEASR GAGAG +DND
Sbjct: 81 RSSSLAMELGFAKARARGLAVIKIRHCHNRQLIMGYLARLAGRGMNVTAFWRNAQAPLTEQVVGFRAASPVPEIRVYAVHDVPEENEPNDGITLVMANHVDLLPSMRSGYRFDLLARHEESDLLACRAQALSEGITVDEAVWSRLKLLAGRLLVESSEASRSGAGAGSSDND 252
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A139C184_9GAMM (Uncharacterized protein n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A139C184_9GAMM) HSP 1 Score: 261 bits (666), Expect = 1.310e-85 Identity = 126/172 (73.26%), Postives = 150/172 (87.21%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RS SLA ELGFAKARARGL+V+KIR CHNRQLIMGYL+RLAGRG+N+TAFWRNA EPLTEQVVGFRA H+ PE+RIY++ DVPEENEPNDGITLVMANHV+LLP++ ++ DLLARH ESDL+ACR+R+ EGIEV+D +W RLK LA R+LV +++ SR GAGAG +DND
Sbjct: 84 RSSSLALELGFAKARARGLAVIKIRHCHNRQLIMGYLARLAGRGMNVTAFWRNAHEPLTEQVVGFRANHTVPEIRIYTVADVPEENEPNDGITLVMANHVDLLPAMRSNYRYDLLARHEESDLLACRDRAYLEGIEVDDTLWERLKALATRMLVEATDDSRQGAGAGTHDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A1M7I8K8_9GAMM (Malate/L-lactate dehydrogenase n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A1M7I8K8_9GAMM) HSP 1 Score: 260 bits (665), Expect = 2.500e-85 Identity = 127/181 (70.17%), Postives = 153/181 (84.53%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEP---------LTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
+S SLA ELGFAKARARGL+V+KIR CHNRQLIMGYL+RLAGRG+N+TAFWRNAQ P L EQVVGFRAG S PE+R+Y++ +VPEENEPNDG+TL+MANHV+LLPSL ++ LDLLARH ESDL+ACRER++Q+GIEV++ +W RLK+LA R+LV S+E SR GAGAG NDND
Sbjct: 84 KSSSLALELGFAKARARGLAVIKIRHCHNRQLIMGYLARLAGRGMNVTAFWRNAQAPDSGKMNDTPLIEQVVGFRAGSSVPEIRVYAVHEVPEENEPNDGVTLIMANHVDLLPSLRSEYQLDLLARHQESDLLACRERAMQQGIEVDEGLWVRLKSLATRLLVESTETSRSGAGAGSNDND 264
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A291PBS1_9GAMM (Uncharacterized protein n=9 Tax=Halomonas TaxID=2745 RepID=A0A291PBS1_9GAMM) HSP 1 Score: 259 bits (662), Expect = 5.310e-85 Identity = 125/172 (72.67%), Postives = 151/172 (87.79%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RS +LA ELGFAKARARGLSV KIR CHNRQLIMGYL+RLAGRG+N+TAFWRN Q+PLTEQVVGFRA S PE+R+Y++++VPEENEPNDGITLVMANHV+LLP++ D+ DLLARH ESDL+ACR ++L+EGIEV +A+W RLK LA R+LV +++ASR GAGAG +DND
Sbjct: 84 RSSTLALELGFAKARARGLSVTKIRHCHNRQLIMGYLARLAGRGMNVTAFWRNVQQPLTEQVVGFRANGSAPEIRVYAVQEVPEENEPNDGITLVMANHVDLLPAMRSDYRYDLLARHDESDLLACRNQALKEGIEVEEAVWERLKHLATRMLVEATDASREGAGAGTHDND 255
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A4V6P7K0_9GAMM (DUF3726 domain-containing protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A4V6P7K0_9GAMM) HSP 1 Score: 256 bits (655), Expect = 8.250e-84 Identity = 127/179 (70.95%), Postives = 149/179 (83.24%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEP-------LTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
RS SLA ELGFAKARARGLSV+KIRRCHNRQLIMGYL+R+AGRG+N+TAFWRNAQ P LTEQVVGFRA S PE+R+Y+++ VPEENEPNDGITLV ANHV+LLPS+ + D +LLARH ES L+ACRER++ +GI +ND +W RLK LA RILV S++ASRGGAGAG DND
Sbjct: 86 RSSSLALELGFAKARARGLSVIKIRRCHNRQLIMGYLARIAGRGMNVTAFWRNAQAPEGSDQPPLTEQVVGFRANSSVPEIRVYAVKQVPEENEPNDGITLVFANHVDLLPSMRSEFDYELLARHEESTLLACRERAMLDGIPINDGVWNRLKDLAARILVESTDASRGGAGAGTTDND 264
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Match: A0A1M4WEK2_9GAMM (Malate/L-lactate dehydrogenase n=1 Tax=Halomonas ilicicola DSM 19980 TaxID=1121942 RepID=A0A1M4WEK2_9GAMM) HSP 1 Score: 255 bits (651), Expect = 2.490e-83 Identity = 121/172 (70.35%), Postives = 151/172 (87.79%), Query Frame = 1
Query: 1 RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFWRNAQEPLTEQVVGFRAGHSTPEVRIYSIRDVPEENEPNDGITLVMANHVELLPSLGVDHDLDLLARHSESDLMACRERSLQEGIEVNDAIWARLKTLAHRILVASSEASRGGAGAGVNDND 516
R+ SLA ELGFAKARARGL+++KIR CHNRQLI+GYLSRLAGRG+N+TAFWRNAQ PLTEQVVGFRA H+ PE+R+Y++R+VPEENEPNDGITLV+ANHV+LLP++ ++ +LLA+ ES+L+ACRER+ EGIEV+D +W RLK+LA RILV +S+ASR GAGAG D+D
Sbjct: 84 RASSLAVELGFAKARARGLAIIKIRHCHNRQLILGYLSRLAGRGMNVTAFWRNAQMPLTEQVVGFRANHTVPEIRVYAVREVPEENEPNDGITLVLANHVDLLPAMRSEYRYELLAQQGESELLACRERAFAEGIEVDDTLWQRLKSLASRILVEASDASREGAGAGSRDDD 255 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12856.1745.1 >prot_E-siliculosus-1a_F_contig12856.1745.1 ID=prot_E-siliculosus-1a_F_contig12856.1745.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1745.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=173bp RSISLATELGFAKARARGLSVVKIRRCHNRQLIMGYLSRLAGRGINITAFback to top mRNA from alignment at E-siliculosus-1a_F_contig12856:3..521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12856.1745.1 ID=mRNA_E-siliculosus-1a_F_contig12856.1745.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1745.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=519bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12856:3..521+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12856:3..521+ >mRNA_E-siliculosus-1a_F_contig12856.1745.1 ID=mRNA_E-siliculosus-1a_F_contig12856.1745.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1745.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12856:3..521+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |