mRNA_E-siliculosus-1a_F_contig12816.1730.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5JCU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU7_9PHAE) HSP 1 Score: 338 bits (868), Expect = 7.820e-117 Identity = 162/183 (88.52%), Postives = 173/183 (94.54%), Query Frame = 1
Query: 1 RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
+ AKGK+KEGYEGKAKGVRQYLWERGWWKDGMS G GV D+MHVEKVLQALPDFKNERTALQHLVESRGHILL SPKCHPEVAGVGIEYSWGFSK KFRRKI+DEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI +K+FIEKMRK QKAHRNILDMETSFLG+Q
Sbjct: 28 KNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVRDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKPKFRRKIDDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 210
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 340 bits (871), Expect = 8.950e-115 Identity = 163/183 (89.07%), Postives = 173/183 (94.54%), Query Frame = 1
Query: 1 RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
+ AKGK+KEGYEGKAKGVRQYLWERGWWKDGMS G GVSD+MHVEKVLQALPDFKNERTALQHLVESRGHILL SPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLH NIE+SLC KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI +K+FIEKMRK QKAHRN+LDMETSFLG Q
Sbjct: 198 KNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEESLCIHKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNMLDMETSFLGFQ 380
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.070e-113 Identity = 164/183 (89.62%), Postives = 175/183 (95.63%), Query Frame = 1
Query: 1 RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
+ AKGK+KEGYEGKAKGVRQYLWERGWWKDGMS G GVSD+MHVEKVLQALPDFKNERTALQHLVESRGHILL SPKCHPEVAGVGIEYSWGFSKQKFRR+INDEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI +K+FIEKMRK QKAHRNILDMETSFLG+Q
Sbjct: 393 KNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRRINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 575
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 345 bits (884), Expect = 6.290e-110 Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 1
Query: 1 RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
+ AKGK+KEGYEGKAKGVRQYLWERGWWKDGMS G GVSD+MHVEKVLQALPDFKNERTALQHLVESRGHILL SPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI +K+FIEKMRK QKAHRNILDMETSFLG+Q
Sbjct: 807 KNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 989
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5K769_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K769_9PHAE) HSP 1 Score: 294 bits (752), Expect = 1.130e-96 Identity = 140/178 (78.65%), Postives = 156/178 (87.64%), Query Frame = 1
Query: 16 KIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
KIKEGYEGKAKG +QYLWERGWWK+GM+A G++DE +VEKVLQAL DF++ERTALQ+LVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLHANIEKS+C EK+LT+GRVRRFARRTRDYCRAYR+I L + +EKMR QKAHRNILDME FLG Q
Sbjct: 207 KIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 384
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5KLA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA1_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.540e-92 Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 1
Query: 1 RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESK 468
+ AKGK+K+GYEGKAKGVRQYLWERGWWKDGMS G GVSD+MHV+KVLQALPDFK ER ALQHLVESRGHILL SPK HPEVAGVGIEYSWGFSKQKFR+K NDEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI SK
Sbjct: 189 KNAKGKVKKGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVDKVLQALPDFKTERKALQHLVESRGHILLSSPKSHPEVAGVGIEYSWGFSKQKFRQKNNDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSK 344
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.400e-87 Identity = 139/178 (78.09%), Postives = 155/178 (87.08%), Query Frame = 1
Query: 16 KIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
KIKEGYEGKAKG +QYLWERGWWK+GM+A G++DE +VEKVLQAL DF++ERTALQ+LVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLHANIEKS+ EK+LT+GRVRRFARRTRDYCRAYR+I L + +EKMR QKAHRNILDME FLG Q
Sbjct: 803 KIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSM--EKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 978
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5L885_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L885_9PHAE) HSP 1 Score: 280 bits (715), Expect = 5.530e-87 Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 1
Query: 103 GEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
G GVSD+MHVEKVLQALPDFKNERTALQHLVESRGHILL SPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+LRGVVI +K+FIEKMRK QKAHRNILDMETSFLG+Q
Sbjct: 610 GAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHGNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 758
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 277 bits (708), Expect = 4.080e-84 Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 1
Query: 16 KIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
KIKEG+EGKAKG +QYLWERGWW +GM+A G++DE ++EKVLQAL +F++ERT LQ LVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQ+FRRK NDEVPKHLHANIEKS+C EK+L +GRVRRFARRTRDYCRAYR+ L V + +EKMR QKAHRNIL ME FLG Q
Sbjct: 857 KIKEGHEGKAKGSKQYLWERGWWIEGMNASVGIADEKNIEKVLQALTNFESERTELQCLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQRFRRKYNDEVPKHLHANIEKSMCREKHLMIGRVRRFARRTRDYCRAYRETQLGAVDGQGLQLVEKMRDTQKAHRNILKMEPGFLGKQ 1034
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.380e-79 Identity = 128/149 (85.91%), Postives = 136/149 (91.28%), Query Frame = 1
Query: 103 GEGVSDEMHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHANIEKSLCTEKYLTVGRVRRFARRTRDYCRAYRDISLRGVVIESKDFIEKMRKNQKAHRNILDMETSFLGNQ 549
G GVSD+MHVEKVL ALPDFK ERTAL+HLVESRGHI L KCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLH NIEKSLC +KYLT+GRVRRFARRTRDYCRAYR+I+L GVVI S +FIEKMRK QKAHRNILDMETSFLG+Q
Sbjct: 497 GAGVSDDMHVEKVLHALPDFKIERTALEHLVESRGHIHL--SKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALSGVVIRSNEFIEKMRKIQKAHRNILDMETSFLGDQ 643 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12816.1730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12816.1730.1 >prot_E-siliculosus-1a_F_contig12816.1730.1 ID=prot_E-siliculosus-1a_F_contig12816.1730.1|Name=mRNA_E-siliculosus-1a_F_contig12816.1730.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=184bp RTAKGKIKEGYEGKAKGVRQYLWERGWWKDGMSAGEGVSDEMHVEKVLQAback to top mRNA from alignment at E-siliculosus-1a_F_contig12816:303..854+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12816.1730.1 ID=mRNA_E-siliculosus-1a_F_contig12816.1730.1|Name=mRNA_E-siliculosus-1a_F_contig12816.1730.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=552bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12816:303..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12816:303..854+ >mRNA_E-siliculosus-1a_F_contig12816.1730.1 ID=mRNA_E-siliculosus-1a_F_contig12816.1730.1|Name=mRNA_E-siliculosus-1a_F_contig12816.1730.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1104bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12816:303..854+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |