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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 942 |
| Model size | 957 |
| Exons | 6 |
| Ec32 ortholog | Ec-02_002290.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927802.233391-UTR-E-siliculosus-1a_F_contig1281:23752..23767 | 1622927802.233391-UTR-E-siliculosus-1a_F_contig1281:23752..23767 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1281 23753..23767 - |
| 1696318685.970214-UTR-E-siliculosus-1a_F_contig1281:23752..23767 | 1696318685.970214-UTR-E-siliculosus-1a_F_contig1281:23752..23767 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1281 23753..23767 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1281.1726.1 >prot_E-siliculosus-1a_F_contig1281.1726.1 ID=prot_E-siliculosus-1a_F_contig1281.1726.1|Name=mRNA_E-siliculosus-1a_F_contig1281.1726.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=314bp
MLGEGISEEYGDNHLVSSEPSYDEAARLAGYFDNDGVYQGGLAQWDDWSE
DSYTCESVSGNGKYCQRWGTERYYADPEEQFLKGNCTCVRPLADTVDSTF
GISINDWYSGIDDGETTSSSEAALEVCVEYDCVYIETNLYTACDCDIFGL
RREEWGPGWWREYTHCDEFTCHHGNNLVTLNESFALASSATETSLPLENI
SSVPINPSIVSESLDYGWLMDYQCTQECFAGIGILLGGAIMVGMAPLLAA
GCRGHYWQVSCSAPFALAASGLLAAFFGGWYAVWGGVVPGTAIAVILGGY
VSGNRTRLPFRRF* back to topmRNA from alignment at E-siliculosus-1a_F_contig1281:16970..23767- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1281.1726.1 ID=mRNA_E-siliculosus-1a_F_contig1281.1726.1|Name=mRNA_E-siliculosus-1a_F_contig1281.1726.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6798bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1281:16970..23767- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGTCGTTTGCCATCATGCTTGGCGAGGGGATCTCGGAAGAATACGGCGA
CAACCATTTGGTTTCCTCGGAGCCAAGGTAGGGCTCATACCGCTTGGGTA
AGTAAGGGGGTGGTGGCTGTGCTTGTTGAAGTGAAAAACATAATCGTTGC
GTAGCATGGCGATTGACGTTTGAATGGCACATTGCTGTGGTCTTGTGTGT
TCTCCAGCGGGATTTGCGTACGTGGTTGATGCAGACTTCGTGATGCAACT
GCAGTGCACAGTAGTGGGGGTACCTTTAATATGGGTGCTGCTGTAGAGAA
CGTCCGTCTGTTCGCAAATTTCGGCCCCAAGCACATAAAAACTCTGGCAA
TCCGACTGCCGACACACGTGCGTCAAAACCTCGGAATGTGTACATCGACT
CTGGGCGTCCTTCCTTATTCAATCAAGAGGGCTGCCAAACTGTATGATCT
TGGCGCACTTCTCTTCGTCACGATGGAGCTGTTTGCAGTCTCTGCAACCC
GGGGCTGTAGCGCACGGCCTTGGGGTCCAAAACTAATTCCAATCGCTGAC
GATACTGGTGGGGAACACGGGTAGCAAGAAGACAATGTTAAACTTCACCT
TCAAGCGCCTCCTGATGGCAAGCCGAAAAACTCCCAAGAGTTGTCGCATT
GCGGAGGACGAAAAAACAGCCGACCAAACGCGGGAATGAGACGTTCTGGT
GCCGCCACTACTTCATTTGATGCCAGTTTGGTTTGAGGTTGTTAGTTCCC
AGCGATTTTCACAATGTTCACAAAAAGCAGAGCGTGTGTAATGTCTGCAA
ATATAGAGAAACGATTGCTCCTTGCTGCATGTTCCGAATTTTTATGAAAA
TATCGCCTCTGATTTCTTCGAAGTTCTGCAGGCATCTCACCAGAACCAGC
ATCTCAACGTCGGGGGCACTTGTTTGAATCGCGTTGCTGCACAAATATCT
GTTCCTCGTGACCTTGTTCCTCAAGGTATAACTCAGGTCATTAGCCGTAC
ACCACGAGCTGCAAGCACTCATGCTGCTACATACGAGTTGGTGCACAGAG
ATCCTTGTCCTTCATCGGCGTGACGCTCTTGACCGGCGTGACCACCGCAA
CATACTTGGCACACCTCAAGCAGTAGTTCAGGTTATCATTCTTTCGTGGG
AGGGTATTCCCAATTTCCAAAATAGTGTCTACTCATTGGGGTGACTGCCA
TATTTCTTGGCGGCTCTTAGAAAGTTGCAATGGAGCTGAGAGTCGCATCT
CACAATGATCACCAGCTTGTATCAGCCCTTGCGAATATTATCTTGTCGTT
TTCAAACCTTCCGCCATCCTAGTGGGAATCATGATGTACGATCTAAAAGT
GCAATTCACCAGACACCATCTCGACCGTCGACGCTCGAGCAATACTACCA
TGCCCTCGACAAATTCACCGAGATGACCAAAAAATGAAGCCCGCACAAAA
GATATTTGTGTCTCCCCCTTCGCGTGGTTCTAAGCTACGACGAAGCGGCG
AGATTGGCCGGCTACTTTGACAATGACGGGGTGTATCAAGGCGGCCTAGC
ACAATGGGACGACTGGTCGGAGGACTCTTATACCTGCGAAAGCGTCTCGG
GCAATGGGAAATATTGCCAAAGATGGGGAACGGAGAGGTAGGCATCCGTC
GCACGATGAAACGACCTTCCACATTCTGAAAATGCGTGCCTTTTTAACCA
CACATTGTTGTTGGTTGTTGTTGTGGTTGTTTTCGGTATTCTTGCCTCAT
CGAAGCCCAATCTTGCAAGGACAGGGGCATCGTTTGCTTGTGTGTTCGTC
AAACCACTGAAACAGAGCGGAGCGATGCTGCTTGTACCAACAGGCAGACG
TTTCAAAGGTTACCTACATGGCACGGAGTTCGAAACCCAGCCCGCGAAGC
AACTCCGACCGTCTTGACGGATATCATATTTGCATTATCCTGCACACACT
CGCGTTTCGTGAAACAGGTACTACGCAGACCCTGAAGAGCAATTCTTGAA
AGGAAACTGCACGTGCGTAAGACCCCTCGCGGATACCGTAGATTCGACCT
TCGGCATCAGTATTAACGACTGGTACAGCGGCATCGACGACGGCGAAACC
ACGTCGTCATCCGAGGCTGCTCTAGAGGTGTGACCTAAAACGAATTTTCA
ATCGATCTTGCGTCGTTCGTGTTTTCTTAGAACACATGCGTACAATCAAT
GAAATCTATGTATCCTTTCGGGATAAAACGACAGTCGAAGGGGATGTGTC
CGAGTATTTGCTGTCGTGACTGCGCGCACTGTGGGTGTCTATCCTGTGTT
TGATGCTGAGATTGGTCTTGTATCGTCTGATGAAAGCACAAGTCGTCGTG
AACTAACGACCTAGGGCACAGAAACGAGGGAGTTACTGAGCTGTCGTTTT
CAACAGTTGGCAAGTCGTTGGTTGCTCTGCTGTCTGCCGCCCTGGTGTCA
ACACATTGAAGAGTGTTGCCTGTGGCGCTCAAATGAATTGGTATGCTGTA
GATGTTCCTTGGAGTCTCCTTGTGGTTGATTGCCATCGTCTGTATCCTGT
GGGTTGAATGGATGCTATGGGTCTGTTGAGCCTTCCGGGTGTTCTTGCAG
CGTGCTCAACTGACATGGTCGAGCAACGGTGCGGGCTCCTGCTGAATCAT
GATGCAGTCAACGTGTATCCCCTGTCCTGCACTATCGATACCCCTCGCTG
TGTTCCAAGAACAACCTTCTTCTCTGTTCTACCGGCCCTGCCAGGGGAAC
TTTGCCAAGACGGAGGCCGTCGGGGTCCACAAACCCCTCAGAATCCCTTT
TCCGCAATGAATGGTGAAAGTCGTTTGACTGTTGTATCATGTTTTTTGGA
CGACGTGCCCGGAGTCGTATCGGTTCGGTACTCCCAAGGAATGCCGCAGT
TGCAAACCACACTTCCCGATCAGGGTGCATACACGAGACACAGGAAAGAA
GCAACGCGACGCCTTCTCTTTCTCCTATCGAACGCTGTCCTATTCCCGTC
TACCTAGACGCGGAGAGTGTGTCCAACACCTTGCCGGCGCTACCCCCTGC
GTTTACATCGCTGGACGAAGGCTGAGTCTTGTTCAAACGTTACATAGCTG
AACCAAGGCTGAGTCTTGCTCAAACGTACACGCGATCTCGCGCGATCTCG
CCTCTCCGCAGGATGCGTCGTTTTGCTCGGCCTGGAATTGTCGCGAAAAG
CGATACACACAGGTATGCGGGCTCTAGTAGGTAGTGCGCATGTGTAGAGA
GATGGTAAGGCATCTCAATGCTGGTGAAAAGTCACTGGCCCGACCGGTGA
TGGGAGCCAGGGCGGGGACATCACTTTTCCGGAGCTATGTTCTAGTTTGA
CCAACGACTGATGCTACGGTAGGGGGGTGCACGTTTGGGTGAAGTCTTTC
CCTTCTAGGAGAAACCGTGTTGTAGGCTTGTTGTTTTGGTAGTCTTTCGG
CGAAACGGGACGCGGCCAAACAGGTTACGTAGACAGTGTTCCCCTACCCA
AAGTCGTGAGTCGGGGTAACCTCCCTACCGTAGCATCACACCAACCTGTA
CGCTGACATCGGTCACCCTCTGGTTGGTGATAGATATACGATTGGATCTT
GTCAGAAAAAACCCTGTTTGTTAGGACCACGCGCTAACTCGCTGGGTGGA
AATCAAGAGAATCGAAGATACTTGCAGTGGAACTTGGTTTTGGATCGACA
AGGTGTCGTAGCACACAACAGAAGGTTCGAGCTAGCCTTAGTGGCGCCCG
CACGAAAATGGTTCTGAAACTCCTCGACAAAACGCTTCGGGGTTAACCGC
ACAGCCGAAACGTCCTTCGTTCCTTCCCCTCTCTCTCCCCAAAGCAATGC
ACCTGCACCGAATACGAGACTCAGACTACGTGTTCAAGAAGACAACTGAG
GAGAAGCTCAGGGGGCAGTGGCGGCAGCAGCGGCAGCTCCTGCTCATCCA
GGGAGGTACTACACGGCCTTGTGACCACGTCATTGCTCTTTGGCAGCATT
CGTCATAACTGAACTAGAGTAAAACATAGCAAACCACATGCCGGCATCAC
ACATTTTGCTGTCAGCATCGCGAATAAGATGTATAGTTCGGAAGTCTTGC
CAGGCCGGAGACTGCGATTCTCACCAGCAAGATCCTTCTGCTCAGCATTG
GAACCCCCTCTGTTGTTCGAACCACGCGGCCATGGACCCAAGCCCCCTCG
TCTCTTTTTTCCGGACAAATTGCTAGCCCAGTCTCCCAGATCGTAGCTTG
TAGCGGGAAAAAACACGTCGCCAGCATTTTGACAGGGCGAAAGCCGCAAG
GTCAACCTAGGGATACCTGTCGGCTTTTCGTTGGGCCATACCCGCCTGCC
ACGGAGCAACTGGAAAACACGTGTGGTTCGTTTGTGAACGTGACGCTGGA
AACAGGTGTGCGTGGAGTACGACTGCGTGTACATCGAGACAAACCTTTAC
ACGGCGTGCGACTGCGACATCTTCGGCCTAAGGCGAGAGGAATGGGGTCC
TGGCTGGTGGAGAGAATACACGCACTGCGACGAGTTTACGTGCCATCACG
TACGTACGCAGGAAGAGAGGAAAACAACATGAAGACATACGTGGCCTTGG
GGGTTGACGTGCGTACGTGAGAATCGACGCCCAAACGTCTGACGTTGTTG
GATTGATTGCAACCTCGGCTCATCGCCAGGGGACAAGACCTTAGATGTGG
TAGGTCTGCGGTATAAGAAACCACAGATCGCGACGCACTTCACGAGGAAT
ATCTGGGCACAAAACCTACACTCGCCTTTGCCATGTGGTGTGGATTTGCT
GTAGCCACATATGATCGTTCGGTTTCTGTACCTCTGCTGCCCCTAACTCA
ACGTTCTCTGACCACCTGTTTCTTCGCCTAGGGGAACAACTTGGTGACGC
TGAATGAGAGCTTTGCGCTGGCGTCGTCTGCGACCGAGACTTCGCTCCCC
CTCGAAAACATCTCAAGTGTTCCAATAAACCCAAGCATCGTGTCCGAAAG
TCTAGACTACGGTTGGCTGATGGACTACCAGTGCACGCAGGTACGGACAC
GTTGCGGCCGGAGGAGGCTCGGGCTGATGCTACTGTAGAGGGGGTGCACT
TTCGGGGGAAAATCTTGCACTTTTTGGAGACAGAGTGTGGTCCTGTTTCG
GTCCTCTTACGGCGATATAGGACGCGGCCATAGGTTTTCAGAAAGTGTAA
CATGAGGCGACCTCCCTACCGTAACATCACTCCTCGGTGTTCGATTTCAG
GATCTCGTTGTGTGATACAAAGGAGAAACTTATTGTCGCAACAAGCTGCC
CAGTGCTCGTCGTACTCACTCGTAGAACGTCCCATCCACCCTCTTGTTGG
CCACCACAAGACATGCGCGTGGTGCGTCGAGTGCAGGAGTACGGCCACCA
TGCGTGTCCAGTTACTGTAAAAAAAAGCGGGCTGATTTGGTAGCTGTACC
CGTGTGCGGAGGAAGATCAATACTTGGCAGTCGCCATTGAATTGGCGCCC
CGCGTTTGTCAAATATTCATTCCGCCGTTCGATACAGCAAAGGAGACCGA
TCTGCCTCAAGGATTTCTAAACAATAATGGCAAATTTCTGATCAAGTGTA
GAAACCGCTTGCCAACTCTTGCCCCATCTCAGACCCAAGACGTCAACGGT
AGTGCGTGGTGCAGCGAATGGAACGGAATGACTGGCGATGAGGATTCCGA
CGTTGTCGAGCAGCTGTGCGAGTGTCAAACCGGGGAGCCCTCTGACACGT
ATTGCACGGTATGCTGGGTGTGGTACGCGGTAATTTCTGGACGCTTTTGT
TGGTTCGGGTTTGGGCTTGACGTACATGCAGCAGACTAGCCATCTACATT
TCGTTCAGTGAAAGGAGCCGCGATCGGCCCGCTGGTGTTGTAGGAAATCC
GGAAAATGTTTTAGCGAAAACGTTGCTCCATTCATAAATTTCGAGACGTG
GCCAATGACCCGTCGAGCGGCTATTGATATGCCTGGCTTGAGAGGAAGAG
CCCGAGACCGCAATGCAGCTTGGGCATGACCTTCGTCTTCGTGATTCGCC
GCCGAGGTATCAAATTACGTTTTCCCGCCTCACCACCACCCACACGCTTG
GTGCTCGTTTGCTCTCCGCCCGCATCTCTGGCAATGACGTATCCAAACTA
CTCTGCTCCGCAGGAGTGGCACTGTACATCATATTTTATGGGTCGCTGTC
AGGTACGTGAGACCTGGACGTCAATGAAAGGGAAATAAACAGTCATTCAT
GGACAAAGGGTTTAGCCCGGAAGTCTGAACCAATACACATGGGACATGTT
TTCGTCAGGATACGTCAGACTTTGACTACGCCAACAAACTTCTCGCGTTC
GATTTTTCAAGGCCTTGGTATCTTGTCCAGTCCTTCTCTATCATATATTT
ATTGGTGACATGTGCTGTACACGGAGGCACTCTCTGTGGGATCAGAAGGA
ACATGAGACGCTCCTTTCATGAGAGGCTGTTGCTTATTGTGGTGCCTCTG
GCGTGAATGAAACGGCTTCCTCCATGAACAACAGGAGTGTTTCGCTGGCA
TTGGCATCTTGCTCGGGGGGGCGATCATGGTGGGCATGGCCCCGCTGTTG
GCGGCGGGGTGCCGGGGTCACTACTGGCAGGTTTCCTGCTCGGCGCCGTT
CGCCTTGGCGGCTTCCGGCCTTCTGGCAGCGTTCTTCGGCGGGTGGTACG
CGGTTTGGGGCGGGGTGGTGCCGGGGACTGCGATCGCGGTCATTCTGGGA
GGGTACGTGTCGGGAAATCGAACACGGTTGCCGTTCCGTCGATTCTGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1281:16970..23767- >mRNA_E-siliculosus-1a_F_contig1281.1726.1 ID=mRNA_E-siliculosus-1a_F_contig1281.1726.1|Name=mRNA_E-siliculosus-1a_F_contig1281.1726.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1281:16970..23767- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTTGGCGAGGGGATCTCGGAAGAATACGGCGACAACCATTTGGTTTC
CTCGGAGCCAAGATGCTTGGCGAGGGGATCTCGGAAGAATACGGCGACAA
CCATTTGGTTTCCTCGGAGCCAAGCTACGACGAAGCGGCGAGATTGGCCG
GCTACTTTGACAATGACGGGGTGTATCAAGGCGGCCTAGCACAATGGGAC
GACTGGTCGGAGGACTCTTATACCTGCGAAAGCGTCTCGGGCAATGGGAA
ATATTGCCAAAGATGGGGAACGGAGAGCTACGACGAAGCGGCGAGATTGG
CCGGCTACTTTGACAATGACGGGGTGTATCAAGGCGGCCTAGCACAATGG
GACGACTGGTCGGAGGACTCTTATACCTGCGAAAGCGTCTCGGGCAATGG
GAAATATTGCCAAAGATGGGGAACGGAGAGGTACTACGCAGACCCTGAAG
AGCAATTCTTGAAAGGAAACTGCACGTGCGTAAGACCCCTCGCGGATACC
GTAGATTCGACCTTCGGCATCAGTATTAACGACTGGTACAGCGGCATCGA
CGACGGCGAAACCACGTCGTCATCCGAGGCTGCTCTAGAGGTACTACGCA
GACCCTGAAGAGCAATTCTTGAAAGGAAACTGCACGTGCGTAAGACCCCT
CGCGGATACCGTAGATTCGACCTTCGGCATCAGTATTAACGACTGGTACA
GCGGCATCGACGACGGCGAAACCACGTCGTCATCCGAGGCTGCTCTAGAG
GTGTGCGTGGAGTACGACTGCGTGTACATCGAGACAAACCTTTACACGGC
GTGCGACTGCGACATCTTCGGCCTAAGGCGAGAGGAATGGGGTCCTGGCT
GGTGGAGAGAATACACGCACTGCGACGAGTTTACGTGCCATCACGTGTGC
GTGGAGTACGACTGCGTGTACATCGAGACAAACCTTTACACGGCGTGCGA
CTGCGACATCTTCGGCCTAAGGCGAGAGGAATGGGGTCCTGGCTGGTGGA
GAGAATACACGCACTGCGACGAGTTTACGTGCCATCACGGGAACAACTTG
GTGACGCTGAATGAGAGCTTTGCGCTGGCGTCGTCTGCGACCGAGACTTC
GCTCCCCCTCGAAAACATCTCAAGTGTTCCAATAAACCCAAGCATCGTGT
CCGAAAGTCTAGACTACGGTTGGCTGATGGACTACCAGTGCACGCAGGGG
AACAACTTGGTGACGCTGAATGAGAGCTTTGCGCTGGCGTCGTCTGCGAC
CGAGACTTCGCTCCCCCTCGAAAACATCTCAAGTGTTCCAATAAACCCAA
GCATCGTGTCCGAAAGTCTAGACTACGGTTGGCTGATGGACTACCAGTGC
ACGCAGGAGTGTTTCGCTGGCATTGGCATCTTGCTCGGGGGGGCGATCAT
GGTGGGCATGGCCCCGCTGTTGGCGGCGGGGTGCCGGGGTCACTACTGGC
AGGTTTCCTGCTCGGCGCCGTTCGCCTTGGCGGCTTCCGGCCTTCTGGCA
GCGTTCTTCGGCGGGTGGTACGCGGTTTGGGGCGGGGTGGTGCCGGGGAC
TGCGATCGCGGTCATTCTGGGAGGGTACGTGTCGGGAAATCGAACACGGT
TGCCGTTCCGTCGATTCTGAGAGTGTTTCGCTGGCATTGGCATCTTGCTC
GGGGGGGCGATCATGGTGGGCATGGCCCCGCTGTTGGCGGCGGGGTGCCG
GGGTCACTACTGGCAGGTTTCCTGCTCGGCGCCGTTCGCCTTGGCGGCTT
CCGGCCTTCTGGCAGCGTTCTTCGGCGGGTGGTACGCGGTTTGGGGCGGG
GTGGTGCCGGGGACTGCGATCGCGGTCATTCTGGGAGGGTACGTGTCGGG
AAATCGAACACGGTTGCCGTTCCGTCGATTCTGA back to top
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