mRNA_E-siliculosus-1a_F_contig128.1707.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig128.1707.1
Unique NamemRNA_E-siliculosus-1a_F_contig128.1707.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: D8LTS6_ECTSI (GatB/YqeY n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS6_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 1.440e-134
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 3 
Query:   45 MKFFRHALPAFTVALGQVSAFVTLPASHQVAGVSRRQAAKAWTSAAGAGCRRAASSTRLSMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA 677
            MKFFRHALPAFTVALGQVSAFVTLPA HQVAGVSRRQAAKAWTSAAGAGCRR+ASST LSMG+FDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA
Sbjct:    1 MKFFRHALPAFTVALGQVSAFVTLPAPHQVAGVSRRQAAKAWTSAAGAGCRRSASSTSLSMGVFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA 211
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A836CGF6_9STRA (Yqey-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF6_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.130e-51
Identity = 91/152 (59.87%), Postives = 117/152 (76.97%), Query Frame = 3 
Query:  216 RLSMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLK 671
            R+S GI+D ++ +MK +MK+ +  KL  LR +RAAFL ETK AG+GD LPD+KC+A+LRK+SK ++ESIDMY KG R +LV+KET    +I++ LPQLAD+ TT KW +EAI SAGAKGP DMGKVMG LM  HK EMDG +AQ++V   LK
Sbjct:   39 RMSSGIYDTISEQMKTAMKAKEADKLAALRNIRAAFLKETKEAGAGDTLPDDKCMAVLRKLSKMRKESIDMYAKGGRQELVDKETVELGIIESFLPQLADKETTTKWAEEAIESAGAKGPLDMGKVMGKLMSQHKDEMDGKIAQQVVGELLK 190
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A7V1N981_9DELT (GatB/YqeY domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V1N981_9DELT)

HSP 1 Score: 141 bits (355), Expect = 2.620e-37
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 3 
Query:  225 MGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKG 674
            M I ++V  +MKA+MK+ D  +L  LR +R AFL E K  GS D +PDE C  +LR++ KQ++ESI+ + KG R+++ E E     ++   LP LADEA T+ WV+ AIA  GA GP +MGKVMG LMKAHK E+DG LA+R+V  +L G
Sbjct:    1 MSIVEEVNTQMKAAMKARDSVRLAVLRSMRTAFLNEMKKDGS-DSIPDEVCETLLRRLEKQRKESIEAFVKGGREEMAEVERAELAVLQEFLPSLADEAQTRGWVEAAIAETGATGPKEMGKVMGALMKAHKGEIDGNLARRIVQERLAG 149
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: W7TS37_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS37_9STRA)

HSP 1 Score: 141 bits (356), Expect = 7.290e-37
Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 3 
Query:  210 STRLSMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 668
            STRLS  I++DV   +K +MK  DK KL  LR +++A     K  G+ + LPDEK I IL K+ KQ+QESI+M+ KG RDD+V+ E     +++  LPQLADEATT++WV  AI   GA   SDMGKVMG++MK +K + D  L  +LV   L
Sbjct:   41 STRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEML 193
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A523JLU9_9DELT (GatB/YqeY domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523JLU9_9DELT)

HSP 1 Score: 139 bits (349), Expect = 2.330e-36
Identity = 72/148 (48.65%), Postives = 102/148 (68.92%), Query Frame = 3 
Query:  225 MGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 668
            M IFDD++A++K +M++ DK ++  LR +RAAFL  TK  GS   L DE C  +LRK++KQ+QESI  + +  R +  E E     +I+  LP LADEATT++W++EAIA+ GA    D+G+VMG LM+AHK E+DGGLA R+   +L
Sbjct:    1 MAIFDDISAQLKDAMRARDKTRVTALRSIRAAFLFATKEDGSTT-LADEACFPLLRKLAKQRQESISAFSEAGRSERAEAERAELSVIEEFLPSLADEATTRRWLEEAIAATGASSAKDVGRVMGALMQAHKGELDGGLANRIARERL 147
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A7S3ABW1_9RHOD (Hypothetical protein n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABW1_9RHOD)

HSP 1 Score: 138 bits (348), Expect = 5.270e-36
Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = 3 
Query:  219 LSMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 668
            L M I  ++   +K +MK+ D  +L+GLR +RAAFL + K AGS D + DE+ + +LRK++KQ+ ESI++Y KG R DL E E     LI+A LP+LADE TT+K+V EAI S  +  P DMGKVMG +MK HK+E+DG + +++ S  L
Sbjct:   21 LRMSISSEIAGSIKEAMKARDADRLKGLRNIRAAFLNKEKEAGS-DSISDEEALVVLRKLAKQRVESIELYEKGGRQDLAESEKSELALIEAYLPKLADEETTRKYVQEAIDSTKSSSPKDMGKVMGAVMKDHKSEVDGNVVRKIASELL 169
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A7C2SBQ5_9DELT (GatB/YqeY domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2SBQ5_9DELT)

HSP 1 Score: 133 bits (335), Expect = 2.440e-34
Identity = 74/150 (49.33%), Postives = 104/150 (69.33%), Query Frame = 3 
Query:  225 MGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKG 674
            MGI++DV+A + A+ K+ D P++  LR +RAAF  E K   +  +L DE C+A+LR++ KQ+ ESI+ + KG R +   +E     +I A LP LADEATT++ V EAIA+ GA  P D+GKVMG +MKAHK E+DG LA+R V+A+L G
Sbjct:    1 MGIYEDVSAALTAAQKAKDAPRVAALRGIRAAFQVEQKK-DNAPRLADEACVAVLRRLEKQRHESIEAFEKGGRPERAAEERAELAVIRAYLPSLADEATTRRIVQEAIAATGASKPGDVGKVMGAVMKAHKGEVDGALARR-VAAELLG 148
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A2E5YSG7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YSG7_9DELT)

HSP 1 Score: 142 bits (357), Expect = 6.020e-34
Identity = 78/148 (52.70%), Postives = 101/148 (68.24%), Query Frame = 3 
Query:  225 MGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 668
            M I +DVTA+MK +MK+ D+ +L  LR +R AFL E K  GS + L DE C  ++RK+ KQ++ESID + KG R +L E+E     +I   LPQLADEA T+ WV+EAIAS GA G  +MGKVMG LMK HK E+DG +AQ +V   L
Sbjct:  403 MPIVEDVTAQMKDAMKAKDEHRLSALRSMRTAFLNEMKKDGS-ESLSDEVCEGLMRKLEKQRKESIDAFEKGDRLELAEREHAELVVIQQFLPQLADEAQTRTWVEEAIASTGASGAKEMGKVMGALMKTHKAEIDGKIAQSIVQELL 549
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BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A3A0F5L2_9PROT (Glutamyl-tRNA amidotransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0F5L2_9PROT)

HSP 1 Score: 131 bits (329), Expect = 1.740e-33
Identity = 75/151 (49.67%), Postives = 102/151 (67.55%), Query Frame = 3 
Query:  225 MGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLKGA 677
            M IF+DV+A+MK ++K+ D+ +L  LR +RAAFL E K   S   L DE  I +LRK+ KQ+QESID +    R +  + E     +I   LPQLADEATT++WV+EAIA++GA    ++GKVMG LMKAHK E+D G A R ++ Q+ GA
Sbjct:    1 MAIFEDVSAQMKDALKAKDEARLAALRGIRAAFLNECKKDNSTT-LSDETAIGLLRKLEKQRQESIDAFTDAGRPERADAERAELAVIRTFLPQLADEATTRRWVEEAIAASGATSGKEIGKVMGALMKAHKGELDAGRA-REIAMQMLGA 149
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Match: A0A5J4YRT9_PORPP (Protein YqeY n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRT9_PORPP)

HSP 1 Score: 132 bits (333), Expect = 3.420e-33
Identity = 67/150 (44.67%), Postives = 99/150 (66.00%), Query Frame = 3 
Query:  222 SMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQLK 671
            S  I  DV   MKA+MK+ DK  L   R++RAA +   K  G+ + L D + + +L+K++K +++SI+ Y    R D  +KE +   +I+  LP LADE T ++WV EAIA +GAKGP+DMGKVMG+LMKAH+ E+DG +A+ + +  LK
Sbjct:   68 SKSIEQDVNDRMKAAMKAQDKDLLSAYRLMRAAMVNALKDGGNKESLTDAEAVDVLKKLAKVRKDSIEAYTNAGRKDAADKEARELAIIEQYLPTLADEGTVEQWVREAIAKSGAKGPADMGKVMGILMKAHRDELDGNMAKNIATEMLK 217
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig128.1707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS6_ECTSI1.440e-13498.10GatB/YqeY n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT... [more]
A0A836CGF6_9STRA1.130e-5159.87Yqey-like protein-domain-containing protein n=1 Ta... [more]
A0A7V1N981_9DELT2.620e-3750.00GatB/YqeY domain-containing protein n=1 Tax=Deltap... [more]
W7TS37_9STRA7.290e-3749.02Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A523JLU9_9DELT2.330e-3648.65GatB/YqeY domain-containing protein n=1 Tax=Deltap... [more]
A0A7S3ABW1_9RHOD5.270e-3648.67Hypothetical protein n=6 Tax=Rhodosorus marinus Ta... [more]
A0A7C2SBQ5_9DELT2.440e-3449.33GatB/YqeY domain-containing protein n=1 Tax=Deltap... [more]
A0A2E5YSG7_9DELT6.020e-3452.70Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A3A0F5L2_9PROT1.740e-3349.67Glutamyl-tRNA amidotransferase n=1 Tax=Proteobacte... [more]
A0A5J4YRT9_PORPP3.420e-3344.67Protein YqeY n=1 Tax=Porphyridium purpureum TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig128contigE-siliculosus-1a_F_contig128:16614..21563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size636
Model size1139
Exons6
Ec32 orthologEc-28_002970.1
Ec32 ortholog descriptionAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal
Hectar predicted targeting categorychloroplast
BRITEko00000
Best eggNOG OGNA|NA|NA
Best tax levelMethylobacteriaceae
COG Functional cat.S
EggNOG OGs1JUTA@119045,1RGZS@1224,2U7DJ@28211,COG1610@1,COG1610@2
EggNOG free text desc.GatB YqeY
KEGG koko:K09117
Preferred nameyqeY
Seed eggNOG ortholog648885.KB316286_gene2458
Seed ortholog evalue4.7e-21
Seed ortholog score108.2
Taxonomic scopeBacteria
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig128.1707.1prot_E-siliculosus-1a_F_contig128.1707.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig128 17073..21519 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927799.6250067-UTR-E-siliculosus-1a_F_contig128:16613..170721622927799.6250067-UTR-E-siliculosus-1a_F_contig128:16613..17072Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig128 16614..17072 -
1696318684.8022313-UTR-E-siliculosus-1a_F_contig128:16613..170721696318684.8022313-UTR-E-siliculosus-1a_F_contig128:16613..17072Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig128 16614..17072 -
1622927799.7337532-UTR-E-siliculosus-1a_F_contig128:21519..215631622927799.7337532-UTR-E-siliculosus-1a_F_contig128:21519..21563Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig128 21520..21563 -
1696318684.8578496-UTR-E-siliculosus-1a_F_contig128:21519..215631696318684.8578496-UTR-E-siliculosus-1a_F_contig128:21519..21563Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig128 21520..21563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927799.6420434-CDS-E-siliculosus-1a_F_contig128:17072..171621622927799.6420434-CDS-E-siliculosus-1a_F_contig128:17072..17162Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 17073..17162 -
1696318684.8116019-CDS-E-siliculosus-1a_F_contig128:17072..171621696318684.8116019-CDS-E-siliculosus-1a_F_contig128:17072..17162Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 17073..17162 -
1622927799.6634276-CDS-E-siliculosus-1a_F_contig128:17722..178061622927799.6634276-CDS-E-siliculosus-1a_F_contig128:17722..17806Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 17723..17806 -
1696318684.819385-CDS-E-siliculosus-1a_F_contig128:17722..178061696318684.819385-CDS-E-siliculosus-1a_F_contig128:17722..17806Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 17723..17806 -
1622927799.6799033-CDS-E-siliculosus-1a_F_contig128:18393..185581622927799.6799033-CDS-E-siliculosus-1a_F_contig128:18393..18558Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 18394..18558 -
1696318684.8269763-CDS-E-siliculosus-1a_F_contig128:18393..185581696318684.8269763-CDS-E-siliculosus-1a_F_contig128:18393..18558Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 18394..18558 -
1622927799.6932907-CDS-E-siliculosus-1a_F_contig128:19146..191981622927799.6932907-CDS-E-siliculosus-1a_F_contig128:19146..19198Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 19147..19198 -
1696318684.8345742-CDS-E-siliculosus-1a_F_contig128:19146..191981696318684.8345742-CDS-E-siliculosus-1a_F_contig128:19146..19198Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 19147..19198 -
1622927799.7090886-CDS-E-siliculosus-1a_F_contig128:19511..196441622927799.7090886-CDS-E-siliculosus-1a_F_contig128:19511..19644Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 19512..19644 -
1696318684.842343-CDS-E-siliculosus-1a_F_contig128:19511..196441696318684.842343-CDS-E-siliculosus-1a_F_contig128:19511..19644Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 19512..19644 -
1622927799.7199106-CDS-E-siliculosus-1a_F_contig128:21407..215191622927799.7199106-CDS-E-siliculosus-1a_F_contig128:21407..21519Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 21408..21519 -
1696318684.850229-CDS-E-siliculosus-1a_F_contig128:21407..215191696318684.850229-CDS-E-siliculosus-1a_F_contig128:21407..21519Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig128 21408..21519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig128.1707.1

>prot_E-siliculosus-1a_F_contig128.1707.1 ID=prot_E-siliculosus-1a_F_contig128.1707.1|Name=mRNA_E-siliculosus-1a_F_contig128.1707.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=212bp
MKFFRHALPAFTVALGQVSAFVTLPASHQVAGVSRRQAAKAWTSAAGAGC
RRAASSTRLSMGIFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAA
GSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDA
MLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLA
QRLVSAQLKGA*
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mRNA from alignment at E-siliculosus-1a_F_contig128:16614..21563-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig128.1707.1 ID=mRNA_E-siliculosus-1a_F_contig128.1707.1|Name=mRNA_E-siliculosus-1a_F_contig128.1707.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4950bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig128:16614..21563- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACACACAAACACCTCGACCTCTCTCGCTTACCATCCCCAGAGAATGAAG
TTCTTCCGCCACGCGCTCCCGGCCTTCACGGTAGCCCTGGGCCAAGTGTC
CGCCTTTGTCACCCTCCCGGCGTCCCACCAAGTTGCCGGCGTATCCAGGC
GGCAAGGTGTGAATTGAAACTCGAGGATGGTGATGACACATGTTGAGTTG
ATCTGCGTGCGGTTGCAGCGTCAATTGACACACGATCCACTGCCAGGCGC
TGGCACGGCTTGTGGCGTGCTGCCTGCCGCACGAGAAGTTATTGTGTGCT
GGGACGTTTTGGTATCAGCATTGCGCACCGTCTAGTCTAGCATGGAGTTG
CAGTACTCAAGTATTACAGATGCAGCAGTTCGCGCTACACGAAGCCGTTG
ACGATTGCAGCCGTAGACCACATTCTACAGTCTATTGAGCATAGTGTGGA
ATCGTCTGCCTGGCAAACGTGCGGAGTGTTGCAGGTGTTAATGGCTCGAG
GGACACAAATCCCACCAGTCTCTAACACCAACGTGCTGTTGTAATCATGC
AAGTGTAAGTAGCAAGACCAGGCTGCTGGGTTGAACCGACGAATGAACAT
CCCGCAGTCCCCCAGACACGACGACACCACCGGGCGTTGACACGTGGTGG
CTCTATGCACGCATGAAGCCTACACAACACACAAGTAACGCGCCCGCGGG
GCTTGCAACGGCGGCTGCCCTGGCGAATACGGCGGCACTTTTGTGTGCTT
AGGGTGTTGGGGCGAAGACAAAATCCCCGTTGCTTTGCGTTCGTCTGTAC
TTATCTACAGCGTATCTGAAGGCATGGCGTCTGGAGTACATGTATTCACG
CCGCAGCCGCCTGCGATCGAGAAGTTGTGCACTGCAGCAGTGCACCTATT
TACATCTAGCGCTTTGGCTGCCAATTTGCGCTTTCCAAACACAGCGCAGT
TGTCCCGCTTTGTTGAAGACCCAATAACCCTTGCTGCCCCCCAACTGGTA
CGAAAGGCAAGCACCAGGATAACCGCAAGCCAATACCAAAAAGACAGAAA
AAATGGGCAAAAGGAGAGGAGGGGACGGCGTAGGCTGGCCAAGAGAGCAG
CACCACTCGCCGCCCAAAAGAAACAGCAGAGTCACTGCACAAATTCCCGC
GGCCTGGCAAGGGTCTCAAATTGCATGTCTGCCTGATAAGGGGTGCGTGT
GGTTGTTTTACATACATCCAGTCACAGAGAGACTATCCGTTCGAGACACA
ACCATCGTCGAAGGGGAAGTACCTGCTGGATGTTGTTCTTACGAATACTT
TGGTTATCGGTCTTGGTTGCGCAATGCAGAACGCGCCCGCACTTGAGATT
TTGCATTTTAAGAAATCTGAGGACTTGAGCACCATTTGTGAGCTCGGTTA
AGAACCCCTACACTTATGACTATAGCGTCCACCCGCAGCATGACCCTAGA
CACAGAGATCTTCAGCCTCTGGCAAAAGCGGGCACGTTCTGTATCGGAGC
AGCTTTGCTAAAGGCAAACATCTCAACGCAACCTGCGCGCGGACTAGTTC
ATCTCCTCAACTCTCTCGAGGACGGCTCCCTCCTTCTCCCATGTTTTCTT
AAGATTTCAAGCGGCAGAACATTGGCACCGCCTCTGTTTGGAGTGGGGAC
GGCACTTCGTGTCGAAATGGACGCCTGACTCATGGTCAAACTACGTGATG
CCACTAGGCTGGAGCCCCTCCCCGAACAATCAACCGATGGCGTATCTCGT
TTGGTACATCAACCGCAAGGAGGATAACCAGCTTCTGGCTCGTTCTTGTG
AAACGTAACCTGGGCCGGCGAAAACCCGCGCCCAGGCATTGTAGCGAATC
GCGGTATGGTCTAACGTCTATGACATGCGTTTTCGTGACTACACCCCGCC
GTGACCGATGCTCCCTCAGCTGCGAAGGCATGGACGAGCGCTGCCGGAGC
GGGGTGCAGAAGAGCGGCCTCTTCCACAAGGCTGAGCATGGGAATCTTCG
ACGACGTCACCGCCGAGATGAAGGCGTCCATGAAAAGCGGAGACAAGCCC
AAGTAAGACAATGTGGTTGAAGAAACCGTCGTTGGAGGAGTGGGTGGGAA
AGATGCCGGTGCTGGTTGAGGTGGTGGTGGAAGCGGGCGTCGCTGTTGGC
AGTGTCGTTGTCTGTTGTTGTTAAGGTCGGTGGACTCTGAACCCTTCCCG
TCCGTTGTTGCGGTGGCCACACGTGCCAGCGTGGCCAATGGAAACCTCGG
CGATGTGCATCGAGGCTTCGGGCGGATGCGAGTACTGCACCCGAAAGACA
ACGCGCATGTCGGTATCCGTATACCTCACCCCCGTCCCCCCGGTGCGTCT
TCGCGTTGGATGCAGGCTTGAGGGTTTGCGGATGGTCCGGGCGGCGTTTT
TGACGGAAACCAAGGCGGTGAGGGCCCACAGATCTGCCCCGGGAGCGGGC
GTGTTGTTAACTGAATGTAGGAGGACAGGACAGACTGCTTGAAACTATGG
TGTGGACGGAAACGGCTTGGGAAGAACCCCATCATACTAAATAGGTGGGG
GACGGACCAGCTCTCTGAAAACTCGAGTTTGCCGTTTACGAGCGCTGGGT
TCCTTCTGCCCACAAGAGGTGCACGGGCGTACATAGCTCATCCTTGCATG
TTTGGCCGAACGGGATATGCAGCCGATCGATGAGCTAGCTCATGAAATTG
TCCGTTGTGCGACACGTTGTTGTGATATCATGTATAGCCCGCTCGGCATT
CGCATACCCCACGTTCGCAAAAAGTGGTGTTCGTCTCAAGTAATGAGCTG
CAAAATCTTGAAGGAATTGAGTCGGTGACAGTTTGAGTCAGGTTTGTTGG
GTTTGACAAAGCGGGTACAACGCGTATCTGGTATGCAATTGGCAAGGATT
CGATGCTTTGATGGAACACCTGTGGCGTTTTCGTACGCTCTCACCGTGCT
GGTGATGTCCGCGCAAGGTATCACATTGTAATTTTCATTTTTTTTTTTTC
CAAAGGCGGGGTCGGGGGACAAGCTTCCAGACGAAAAGTGCATCGCCATC
CTCCGAAAAATGTCCAAGCAGCAGCAGGAGTCGATCGACATGTACCGCAA
GGGGAAGCGCGACGACCTCGTAGAAAAGGAGACCAAGACGAAACAGCTCA
TCGACGCGATGCTCCCTCAGGTGTGAGACCGGTGTGAGTGTATTGTCACC
ATGCGCACGTACTGCTGTTAGCTTTCGGTTGACGTCGTCCACGCTGACCT
TCTGGCAGCAGTGAAAGAGGCACTACATATTCTCAGGGGGTCACGAACCT
TCGGTGTATGGCGCGTTCGTCGGTGAGTTCGTTGTTTGTGGTTTCCCTTT
TTGAACCGTCCTGACCTCGATTGAATATCTCTCCCTTAATAGCTGCTGCC
CGTTGTCTTATATGGGTTTTGAGGCCTACTATAGAGTAAGAATCTCGTCG
GGGCTCTATGACCGAACCCTTTTAACTCTCCTTGGTGTGATGTGCTGAGA
CTGTTGGCTAAATGCTTGTGCGCTTTGGCTTATGGACGAAGAAGAAGCTC
TCATACCGGCAGCAACGACGACGACAACAGCATTAAGGTAGTTTCACCCA
CTTGTGTATTTGTCTTGCTTGTCTGTTGAGACTTTTCTGTTGCCTGCGGT
CTCATTCCCCACCCTCCCGCTCCCGGCGCCGTCGGCGTGGTTGTCTTGGC
ACCCCCCCGATGTGCGCTCCCCCGGCAACGACATGTACCCGCCCCCAAAT
TCATCAGCTCGCGGACGAGGCGACGACTCAAAAATGGGTCGATGAGGCAA
TCGCGTCGGCCGGGGCCAAGGGCCCGTCCGACATGGGGAAGGTACGGACA
TGGGCTACGTTCGGGGCAGGCAGCTTGGAGAATGGTTTTCGCGCCGTTAT
ATAGTGGTTTCTCGTTTGGGAGTTGTTCGCGCACTGAAATGCCTATTTTG
TGCGGACCGGAGTATCCTCGAATCTCTTGTTAAGCATTTTCGAGGACCCT
CGCGCAAAAGACGCAGGCTTGCATCTTTGTTGGCCTACGATCCTCAAGGA
CAGGCTCAACGGAGAGCAATATCAGGGTTCGAGCACTAGCTAATGGCATG
AACCGTCCGTCCCTGAATGACACCCTGCCTCGGCTCGATTTCGTATCCGC
GTTGGCATGGGTAGAAAGTGTCTACAACATAGTCTGACGTGGCAAAGGCC
TGGACAAGGGTATTAAACGATGATCTGGTGGATTTTTTTCGGGTCTTTTC
TTAATTTCGTCACGTGTCCGACAGAATGGATCGGATAGTACTGCTGTTCA
TAGACTAGGCCCCCCAACTCGCGCAATTTCACCCCGAAATTGCATTCTCC
CCGCCTAGAAAACATGTTTGTTCTAATCTTGATGGCATACCCGTGCACCA
GGTGATGGGCCTCCTAATGAAGGCGCACAAGACGGAAATGGACGGAGGAT
TGGCGCAGAGGCTTGTTTCCGCTCAGCTGAAGGGTGCATGATCTCTGATC
GGCCAGCTCTTGGGGGATCTCATGGCGTAATCGCTTTCGCCGTGTTTTGG
CTTGACAGACTGTGTGCCGTGTGACTTCTGCTCTTGTGCGAACCGCCTCC
TTTGAAAACCGAAGGTTGGTTTGGCCGTTTCATTGCCTTCTGCACGCGGA
CATTACGAGGGAATACGTTTGTAGTCACCAACTGAGGTGGCAGCGTCTAC
ATAGTCTCTGGTTTTCACCTAAGGGGGGCAGGTGCTATTCAGCTTTACAC
GTAATTGGTTCTCTTCCTTCCGCAGTAGACGTCGGTCGCGTCAAGTCGAA
TATTCCCACGCGCGAATCGTCCACGGTTGAGTATCCCGGTTCTTTCAGCT
GTGGCTGGCTATCAGGGCCTCAATATTGTTGTCCACCGCGGATACACACA
TGTCATTGCCCCGCGAATACACGGCACAGTTGGAATGAATCCAAACGCCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig128:16614..21563-

>mRNA_E-siliculosus-1a_F_contig128.1707.1 ID=mRNA_E-siliculosus-1a_F_contig128.1707.1|Name=mRNA_E-siliculosus-1a_F_contig128.1707.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig128:16614..21563- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGTTCTTCCGCCACGCGCTCCCGGCCTTCACGGTAGCCCTGGGCCA
AGTGTCCGCCTTTGTCACCCTCCCGGCGTCCCACCAAGTTGCCGGCGTAT
CCAGGCGGCAAGATGAAGTTCTTCCGCCACGCGCTCCCGGCCTTCACGGT
AGCCCTGGGCCAAGTGTCCGCCTTTGTCACCCTCCCGGCGTCCCACCAAG
TTGCCGGCGTATCCAGGCGGCAAGCTGCGAAGGCATGGACGAGCGCTGCC
GGAGCGGGGTGCAGAAGAGCGGCCTCTTCCACAAGGCTGAGCATGGGAAT
CTTCGACGACGTCACCGCCGAGATGAAGGCGTCCATGAAAAGCGGAGACA
AGCCCAACTGCGAAGGCATGGACGAGCGCTGCCGGAGCGGGGTGCAGAAG
AGCGGCCTCTTCCACAAGGCTGAGCATGGGAATCTTCGACGACGTCACCG
CCGAGATGAAGGCGTCCATGAAAAGCGGAGACAAGCCCAAGCTTGAGGGT
TTGCGGATGGTCCGGGCGGCGTTTTTGACGGAAACCAAGGCGGCTTGAGG
GTTTGCGGATGGTCCGGGCGGCGTTTTTGACGGAAACCAAGGCGGCGGGG
TCGGGGGACAAGCTTCCAGACGAAAAGTGCATCGCCATCCTCCGAAAAAT
GTCCAAGCAGCAGCAGGAGTCGATCGACATGTACCGCAAGGGGAAGCGCG
ACGACCTCGTAGAAAAGGAGACCAAGACGAAACAGCTCATCGACGCGATG
CTCCCTCAGGCGGGGTCGGGGGACAAGCTTCCAGACGAAAAGTGCATCGC
CATCCTCCGAAAAATGTCCAAGCAGCAGCAGGAGTCGATCGACATGTACC
GCAAGGGGAAGCGCGACGACCTCGTAGAAAAGGAGACCAAGACGAAACAG
CTCATCGACGCGATGCTCCCTCAGCTCGCGGACGAGGCGACGACTCAAAA
ATGGGTCGATGAGGCAATCGCGTCGGCCGGGGCCAAGGGCCCGTCCGACA
TGGGGAAGCTCGCGGACGAGGCGACGACTCAAAAATGGGTCGATGAGGCA
ATCGCGTCGGCCGGGGCCAAGGGCCCGTCCGACATGGGGAAGGTGATGGG
CCTCCTAATGAAGGCGCACAAGACGGAAATGGACGGAGGATTGGCGCAGA
GGCTTGTTTCCGCTCAGCTGAAGGGTGCATGAGTGATGGGCCTCCTAATG
AAGGCGCACAAGACGGAAATGGACGGAGGATTGGCGCAGAGGCTTGTTTC
CGCTCAGCTGAAGGGTGCATGA
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