mRNA_E-siliculosus-1a_F_contig1279.1704.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A6H5JRG4_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG4_9PHAE) HSP 1 Score: 779 bits (2011), Expect = 8.260e-279 Identity = 466/509 (91.55%), Postives = 474/509 (93.12%), Query Frame = 1
Query: 169 PPAISCGRQQQQGLRAGPLLVVALVAVNLSTAPLLVTAKSLPRSRWVASSSNGGSLHDSSASSNARAVAVGVRCGATSSGKEDEGEDTAEAPSSSVSEGGLAATVKETISKLMDVVGSLLGGKGNKNGXXXXXXXXXXXXXXXXXXXXXXGGFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASTAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPMEATGDSDGTVDETEAAAAAGDEDAEQEL 1695
PP QQ LRAGPLL VALVAVNLSTAPLLVTAKSLPRSRWVA+SSNGGSLHDSSASSNARAVAVGVRCGATSSGKEDEGEDT E P S +SEGGLAATVKETISKL VV SLLGGKG+K+GXXXXXXXXXXXXXXXXXXXXX GGFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQR AAS AAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWM RVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSL+DDALREV+EREEEA XXXXXXXXXXXXX EDVERREKKAAELGQEPPESAVKGAEA AATLMLRLADGSRIRRRFLRS+PMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKP ATGDSDGTVDE EAAAAAGDE E+EL
Sbjct: 3 PPXXXXXXXXQQSLRAGPLLFVALVAVNLSTAPLLVTAKSLPRSRWVAASSNGGSLHDSSASSNARAVAVGVRCGATSSGKEDEGEDTDEPPRSPLSEGGLAATVKETISKLTGVVRSLLGGKGSKSGXXXXXXXXXXXXXXXXXXXXX-GGFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRVAASAAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAEXXXXXXXXXXXXXVLEAKQREDVERREKKAAELGQEPPESAVKGAEAKAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKGATGDSDGTVDEAEAAAAAGDEGTEREL 510
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: D7FVT5_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT5_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 8.120e-131 Identity = 212/240 (88.33%), Postives = 217/240 (90.42%), Query Frame = 1
Query: 973 MTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPMEATGDSDGTVDETEAAAAAGDEDAEQE 1692
MTLERKLERSTVAMHHCNPPPSASQMVSWM RVLELKK+LLEVELAEQQRLKDEDTIYTERVEGYSKSL+DDALREV+EREEEA EDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRS+PMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKP EATGDSDGTVD+TEAAAAAGDEDAEQE
Sbjct: 1 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKSLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEQRVAQEALEAKLREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPKEATGDSDGTVDDTEAAAAAGDEDAEQE 240
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A835Z0S3_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S3_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.040e-46 Identity = 124/332 (37.35%), Postives = 178/332 (53.61%), Query Frame = 1
Query: 622 GFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRAAASTAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSS----TMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 1605
G T F +YG +HP F E ++ ATE A N+ LV++ +EKG GK ++ DDAI ++ DP V FI+ F+++ G S + AA+R GA+SLP+LGV+ + ++ K R+ V +HHCNPPPSA +V WM+++LE+K +LE + E RL E + ER +GY++++ D + KE+ E A XXXXXX LG EP GA A A + LRL DG R RRRFL S+ ++ DWADV GV+L+A RLS + + + G T+E AGL + L+ VE +
Sbjct: 69 GLTARFARRYGAKHPIFFEGTYKQATEAALRANKFTLVFLTSEKG--GKKSRADDAIARSFTDPAVISFINEHFILFAAAGPSPS-----GADAARRTGAKSLPYLGVIRTVAKDSK--------RALVGLHHCNPPPSAGGLVKWMSQLLEVKGGVLEADKTELARLAVEANLAKERQKGYAEAVMVDQKQIRKEKREAAAKAKEEAERLAAEAAXXXXXXXXXXXXXXXXXXLGDEP----AAGAAAAAVEVALRLPDGRRERRRFLLSDDTERLYDWADVLGVELEASRLSRGGVRRGQEGAVDLAAEQGKTLEAAGLTGRVLVLVEAR 381
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A7S3EE78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE78_9RHOD) HSP 1 Score: 94.7 bits (234), Expect = 5.330e-17 Identity = 98/334 (29.34%), Postives = 151/334 (45.21%), Query Frame = 1
Query: 625 FTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICK-ALADPEVAEFIDSSFVMWVPGGKSSAQRAAASTAAAKRVGARSLPFLGVVNSA-SETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRV-----LELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 1605
F F+ Y HP+F E ++ +A A R + LV++ +E C+ L EV +ID + + W G S A + +G + PF+ ++ S +D +TL A + W+ + L + L VE ++ R + ++ Y ++L D RE +E XXXXXXXXXX VERRE K LG+EP KG T T+ LRL DG R+ RRFL S+ + + DWAD+ GV ++ L S+ P+ ++ +P D+ T+EEAGL + +L VE++
Sbjct: 139 FVRRFDILYSNLHPRFFEGTYLEALAAAGARFQFLLVFLHSEMHPASVR------FCRQVLGSREVIRYIDENVIFWARGIASPE-----GYRAQRLLGVTTYPFVALITSPPGRSDGVTLSEYNS-------------DAGDFLQWLQTMSARFGTTLTRRRLHVEERDEAR-----QLREQQDREYHETLEADRRREQAAKEAAEQAAEQERLKREXXXXXXXXXXXLVERREGKRVALGEEPE----KGPGVT--TIGLRLPDGKRVDRRFLVSDKVAILFDWADINGVSIEHAALVSSFPRRTYQYPEDADKTLEEAGLSQGTMLLVEER 437
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A5J4Z6R3_PORPP (FAS-associated factor 2-B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6R3_PORPP) HSP 1 Score: 94.7 bits (234), Expect = 6.000e-17 Identity = 112/337 (33.23%), Postives = 158/337 (46.88%), Query Frame = 1
Query: 625 FTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASTAAAKRVGARS------LPFLGVVNSASETDKMTLERKLERSTVAMHHCNP---PPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 1605
F FEA +G H +F S A TA + LVYI E + ++ C++ L D +V FID +F+ W AAST A+ V ARS LP L +V + +AM N P A+ + WM RV E L +Q+ + + ++ E + ++L + XXXXXXXXXXXXXXXXXXXX +K LG+EPP A A+++LR+ DGSR RRFLR + + DWAD GV++ L S+ P+ +F +P D M+I EAGL A+L +E++
Sbjct: 155 FAIKFEASFGNTHARFTRTSLVQALRTAGREYKFALVYIHDEN------REACNSFCRSVLQDGQVIRFIDEAFIFW-----------AASTRFAETVQARSEFRLTHLPALAIVEGHPT--------RPPGRVIAMKQANAFGGPMDAAGVFQWMQRVQERYGVSLISARIQQEERETNRLLRQQQDEEFQRALEEXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXRKQELLGEEPPAQG-----AVTASVVLRMPDGSRNTRRFLRDTKLEMLFDWADTLGVEIGQALLVSSYPRRAFKYPEDKDMSIAEAGLTPSAMLLIEER 454
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A7S0ZCT7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCT7_9RHOD) HSP 1 Score: 77.4 bits (189), Expect = 2.850e-11 Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 1291 DVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQKPMEATGDSD 1632
D ERR +K A L PE KGA +A +++LRL DGSR+ F S P+ + DWAD GV+++A L S+ P+ SF P D+ +T EE+GL +L VE++ A D D
Sbjct: 372 DRERRVQKQASL----PEPLPKGAPESA-SIVLRLPDGSRLAYCFASSAPLEVLFDWADANGVNINAACLVSSYPRKSFKWPEDAKLTFEESGLSPSCMLLVEERLDVAVDDDD 480
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A152AA02_9MYCE (UAS domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA02_9MYCE) HSP 1 Score: 76.3 bits (186), Expect = 2.870e-11 Identity = 102/328 (31.10%), Postives = 160/328 (48.78%), Query Frame = 1
Query: 646 KYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKA-LADPEVAEFIDSSFVMWVPGGKSSAQRAAASTAAAKRV----GARSLPFLGVV--NSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVD-LDAQRLSSTMPKASFSHPGDSGMTIEEAGLGRQALLFVEQK 1605
+YG HP F + S+ +A A + ++ L+YI + K + CK L E EFIDS++V+W ST+ +V A + P+LG++ NS S + T + + S V++ Q++S MT + E+ L V +EQ + + + I E+ E Y SL+ D +E XXXXXXXXXXXX XX E ++R+E K QEP K A ++L+DG+RI+R FL+++ +G ++D+ D + + +D L ++ PK S + TI E GL ALLF+ +K
Sbjct: 54 RYGSTHPSFRQGSYNEAVSFAKSKFKILLIYIHSSKHPNSQQ------FCKEILFTREFKEFIDSTYVIWA---------CDISTSIGFKVFNAMRASTFPYLGMLCCNSISGLTQGTQTKIEDFSGVSLQL-----PRDQIMSNMTGIYEIYGPHLVVAKSEQDQREQDRFIRQEQDEAYLISLKQDQEKERLXXXXXXXXXXXXXXXXXXEXXRLQKESEMLDRKESKKIRFEQEPTGPVSKVA--------IKLSDGTRIQRNFLKTDTIGDIMDYIDTKIQEPIDNYILMTSYPKKSLMN---LDKTIFEEGLFPDALLFLSEK 350
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A1Z5JVV9_FISSO (UBX domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVV9_FISSO) HSP 1 Score: 63.2 bits (152), Expect = 8.970e-7 Identity = 92/282 (32.62%), Postives = 135/282 (47.87%), Query Frame = 1
Query: 655 KRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDS---------SFVMWVPGGKSSAQRAAASTAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRF-LRSNPMGKVLDWADV 1470
K +P S DA + A ++RL LV I + + AA D ++ EVA+ + SF++W KS + AAKR+ P V+ A+ T ++ HHCNPPP+A+ M SW+ + + KNL + + Q + E I ERVEGY S+ + R++ E+ XXXXXXXXXXXXXXXXXE +++R AE P+ AV + TL +R ADG+ +R+F + + V +W DV
Sbjct: 197 KGYPAIEGGSIQDALQLARSQSRLLLVLIPSNRPDRQTAA--DKTAIESFLSVEVAKMAEKPAHKSIPTPSFLLWSAKAKSPE-----AVVAAKRLNLEPNPKRPVLLVATSKQASTTA---SCQVLSQHHCNPPPNATTMASWLNTIRKRHKNLYQ----KMQHAQKELQIAQERVEGYRTSIVQERQRQIDEQ--------XXXXXXXXXXXXXXXXXEAIKQRR---AEFSATLPDPAV-----GSMTLAVRFADGTSHQRQFDPETATLETVFNWVDV 448
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: UPI00126364ED (plant UBX domain-containing protein 8-like n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI00126364ED) HSP 1 Score: 62.4 bits (150), Expect = 1.760e-6 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 1312 KAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADV-QGVDLDAQRLSSTMPKASFSHPGDSGMTIEEAGL-GRQALLFVE 1599
K A L QEP + A TL++++ DGSR RRFL+SN + + D+ DV +GV RL P+ +FS G+SG+T+ E GL RQ LF+E
Sbjct: 492 KEASLPQEPSAD-----DENAVTLLVKMPDGSRRGRRFLKSNKLQSLFDFIDVGRGVKAGTYRLVRPYPRRAFSD-GESGLTLNELGLTSRQEALFLE 583
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Match: A0A433SLF1_ELYCH (UBX domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SLF1_ELYCH) HSP 1 Score: 61.6 bits (148), Expect = 2.420e-6 Identity = 103/335 (30.75%), Postives = 163/335 (48.66%), Query Frame = 1
Query: 625 FTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICK-ALADPEVAEFIDSSFVMWV-----PGGKSSAQRAAASTAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMTRVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLRDDALREVKEREEEAXXXXXXXXXXXXXXXXXXXXXEDVERREKKAAELGQE-PPESAVKGAEATAATLMLRLADGSRIRRRFLRSNPMGKVLDWADVQGVDLDAQRLSSTMPKASFS-HPGDSGM---TIEEAGLGRQALLFV 1596
F FE K+G++HP F + ++ A A R LVY+ +E+ + C+ L E F+++ + W P G +Q A R A PFL V+ ++M++ ++E A ++++ + +V+ ++ L AE+ ++ E+ E Y +SLR D + KER XXXXXXXXXXXXXXXXXXXXX+ +ER +KK+ +L QE PPE A ++ +ML++ GSRI RRFLRS + + + D ++ + P+ + P D G + E+ GLG+ +LFV
Sbjct: 141 FISTFEGKFGQQHPVFYQGTYSQALNDAKKELRYLLVYLHSEEHQN------TETFCRDVLCSEEFVNFVNTQVLFWACNTTSPEGYRVSQ--------ALRENA--YPFLAVI--VLRDNRMSVVARIEGHITG---------APELITRLEQVMADNESSLVAARAERAERSFNQSLRQEQDEAYLESLRAD---QEKERRXXXXXXXXXXXXXXXXXXXXXXXXQFLEREQKKS-QLEQELPPEPAQSHPDSI--RIMLKIPSGSRIERRFLRSQSLKWLYYYVFCHKECPDDFQIVTNFPRRTLPCEPQDGGPDPPSFEDIGLGKSEMLFV 442 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1279.1704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1279.1704.1 >prot_E-siliculosus-1a_F_contig1279.1704.1 ID=prot_E-siliculosus-1a_F_contig1279.1704.1|Name=mRNA_E-siliculosus-1a_F_contig1279.1704.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=511bp MPPAISCGRQQQQGLRAGPLLVVALVAVNLSTAPLLVTAKSLPRSRWVASback to top mRNA from alignment at E-siliculosus-1a_F_contig1279:2..5246- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1279.1704.1 ID=mRNA_E-siliculosus-1a_F_contig1279.1704.1|Name=mRNA_E-siliculosus-1a_F_contig1279.1704.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5245bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1279:2..5246- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1279:2..5246- >mRNA_E-siliculosus-1a_F_contig1279.1704.1 ID=mRNA_E-siliculosus-1a_F_contig1279.1704.1|Name=mRNA_E-siliculosus-1a_F_contig1279.1704.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3066bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1279:2..5246- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |