mRNA_E-siliculosus-1a_F_contig1278.1701.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: D7G6L2_ECTSI (CTP synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L2_ECTSI) HSP 1 Score: 240 bits (612), Expect = 6.110e-75 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
Query: 1 MADSHAASNGTAAPGGMSDGGDGLLEPMKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MADSHAASNGTAAPGGMSDGGDGLLEPMKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK
Sbjct: 1 MADSHAASNGTAAPGGMSDGGDGLLEPMKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 119
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A835Z7S1_9STRA (CTP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S1_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.940e-56 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTG 354
MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGL+TTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE DLDLGNYERFL VRLSRDHNITTG
Sbjct: 1 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLKTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLSVRLSRDHNITTG 91
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A835Z0Y6_9STRA (CTP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y6_9STRA) HSP 1 Score: 184 bits (466), Expect = 6.720e-53 Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGL+TTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE DLDLGNYERFL VRLSRDHNITTGK
Sbjct: 1 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLKTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLSVRLSRDHNITTGK 92
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A453F542_AEGTS (CTP_synth_N domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453F542_AEGTS) HSP 1 Score: 169 bits (427), Expect = 1.460e-51 Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 64 DGLLEPMKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
+G MKY+VVTGGVVSGLGKGVT SSIG +LK CGLR T+IKIDPYLNTDAGTMSPFEHGEV+VLDDGGE DLDLGNYERFL ++L+RDHNITTGK
Sbjct: 12 EGGRTAMKYVVVTGGVVSGLGKGVTASSIGAVLKACGLRVTTIKIDPYLNTDAGTMSPFEHGEVYVLDDGGEVDLDLGNYERFLDIKLTRDHNITTGK 109
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A0D2ME22_9CHLO (CTP_synth_N domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2ME22_9CHLO) HSP 1 Score: 168 bits (426), Expect = 1.610e-51 Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MKY++VTGGVVSGLGKGVT SSIG +LKNCGLR TSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE DLDLGNYERFL + L+RD+NITTGK
Sbjct: 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKNCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDITLTRDNNITTGK 92
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A453F597_AEGTS (CTP_synth_N domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453F597_AEGTS) HSP 1 Score: 169 bits (427), Expect = 6.950e-51 Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 64 DGLLEPMKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
+G MKY+VVTGGVVSGLGKGVT SSIG +LK CGLR T+IKIDPYLNTDAGTMSPFEHGEV+VLDDGGE DLDLGNYERFL ++L+RDHNITTGK
Sbjct: 18 EGGRTAMKYVVVTGGVVSGLGKGVTASSIGAVLKACGLRVTTIKIDPYLNTDAGTMSPFEHGEVYVLDDGGEVDLDLGNYERFLDIKLTRDHNITTGK 115
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A813CE92_9DINO (URA7 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CE92_9DINO) HSP 1 Score: 164 bits (415), Expect = 5.220e-50 Identity = 77/100 (77.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGKASACMQRC 381
MKY+VVTGGVVSGLGKG+TISS+G +LK GLR TS+KIDPYLN+DAGTMSPFEHGEVFVL+DGGEADLDLGNYERFL + L++DHNITTGK + + C
Sbjct: 1 MKYVVVTGGVVSGLGKGITISSLGVLLKAAGLRVTSVKIDPYLNSDAGTMSPFEHGEVFVLNDGGEADLDLGNYERFLDITLTKDHNITTGKVYSQVIEC 100
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A3N7GG79_POPTR (CTP_synth_N domain-containing protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A3N7GG79_POPTR) HSP 1 Score: 167 bits (422), Expect = 5.900e-50 Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MKY++VTGGVVSGLGKGVT SSIG +LK CGLR TSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE DLDLGNYERFL ++L+RD+NITTGK
Sbjct: 1 MKYVLVTGGVVSGLGKGVTASSIGLLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGK 92
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A7S2KL40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KL40_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.210e-50 Identity = 78/92 (84.78%), Postives = 84/92 (91.30%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MKYIVVTGGVVSGLGKGVTISS+GRML+ CGLR TSIKIDPYLN DAGTMSPFEHGE +VL+DGGE DLDLGNYERFL + L+ DHNITTGK
Sbjct: 1 MKYIVVTGGVVSGLGKGVTISSMGRMLQGCGLRVTSIKIDPYLNVDAGTMSPFEHGETYVLNDGGETDLDLGNYERFLSISLTSDHNITTGK 92
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Match: A0A452ZZ03_AEGTS (CTP_synth_N domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZZ03_AEGTS) HSP 1 Score: 166 bits (421), Expect = 9.430e-50 Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 82 MKYIVVTGGVVSGLGKGVTISSIGRMLKNCGLRTTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEADLDLGNYERFLGVRLSRDHNITTGK 357
MKY++VTGGVVSGLGKGVT SSIG +LK CGLR TSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGE DLDLGNYERFL ++L+RD+NITTGK
Sbjct: 35 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGK 126 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1278.1701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1278.1701.1 >prot_E-siliculosus-1a_F_contig1278.1701.1 ID=prot_E-siliculosus-1a_F_contig1278.1701.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1701.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp MADSHAASNGTAAPGGMSDGGDGLLEPMKYIVVTGGVVSGLGKGVTISSIback to top mRNA from alignment at E-siliculosus-1a_F_contig1278:30938..32351+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1278.1701.1 ID=mRNA_E-siliculosus-1a_F_contig1278.1701.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1701.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1414bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1278:30938..32351+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1278:30938..32351+ >mRNA_E-siliculosus-1a_F_contig1278.1701.1 ID=mRNA_E-siliculosus-1a_F_contig1278.1701.1|Name=mRNA_E-siliculosus-1a_F_contig1278.1701.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=768bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1278:30938..32351+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |