mRNA_E-siliculosus-1a_F_contig1276.1691.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1276.1691.1
Unique NamemRNA_E-siliculosus-1a_F_contig1276.1691.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI)

HSP 1 Score: 575 bits (1481), Expect = 1.990e-197
Identity = 308/323 (95.36%), Postives = 308/323 (95.36%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXX-AQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMTG 966
            DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALIS GVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNE XXXXXXXXXXXXX            AQKAKD ERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMTG
Sbjct:   39 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISLGVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEEXXXXXXXXXXXXXQGQQGGSVTGSGAQKAKDGERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMTG 361          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A835YM26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM26_9STRA)

HSP 1 Score: 354 bits (908), Expect = 6.000e-113
Identity = 186/322 (57.76%), Postives = 218/322 (67.70%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMTG 966
            DAGA HVEVKL+EFG+DLIEVSDNGSGV P NYEGLALKYHTSKL  F+DL  + SFGFRGEALSSLCELAGSF VTTRTAD++VGVKL Y R GK++ K+T PR  GTTVSI  +F PLPVR+GEF+RNIKKQ+N+LLR +Q YALI  GVR+TVTNT         I TQ N +L+DNV N                                                          R+I G+VSKAG GVGR+D +RQF +LNGRPV+LPK TR ++EVWR YEMK KPA I++++LPPG FDVNVTPDKRE+F+TG
Sbjct:   37 DAGATHVEVKLREFGLDLIEVSDNGSGVPPHNYEGLALKYHTSKLTEFNDLKSIASFGFRGEALSSLCELAGSFVVTTRTADQAVGVKLTYNRAGKLVSKDTVPRPPGTTVSIGKLFSPLPVRQGEFKRNIKKQYNRLLRVLQGYALICVGVRLTVTNTMPGKQPSRLIATQRNARLEDNVAN----------------------------------------------------------RRITGLVSKAGEGVGRSDTERQFTFLNGRPVELPKVTRVLNEVWRQYEMKNKPAAIVNVQLPPGDFDVNVTPDKREVFVTG 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: K3WIM5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIM5_GLOUD)

HSP 1 Score: 296 bits (759), Expect = 1.140e-91
Identity = 177/335 (52.84%), Postives = 226/335 (67.46%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPE--------------EGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  VEVKL+EFG + IEVSDNGSG++P+NYE +ALK++TSK++ F D+  V SFGFRGEALSS+C+L  SFSV TRT D  +G  L +   GK+  +    R VGTT+ I  +F+PL VR  +F RNIKK + KLL+ +QAYA+ S  V+I+V N   K   +Q  + TQ +  L DN+ +VFG KF +TL  V+I L E              +  +      XXXXXXXXXXXXXXXXXXX       +  R++ G VSK G GVGR+DNDRQF ++NGRP DLPK  +A++EVWR YEMKQKPA +L+  LP G +DVNVTPDKRE F+
Sbjct:   48 DAGATLVEVKLREFGKESIEVSDNGSGIAPANYETVALKHYTSKISRFEDIETVASFGFRGEALSSICQLVSSFSVCTRTKDAPIGAFLEFDSTGKLTKQTQKARPVGTTIMIEELFKPLAVRHKDFHRNIKKHYAKLLKILQAYAVSSTNVKISVVNVTGKHATRQVVLATQAHQSLGDNIASVFGTKFARTLLSVNIDLSEVCQELSRKPAKTMAKSRRGRSGSDXXXXXXXXXXXXXXXXXXXEMCASQLEKTRQVVGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKALNEVWRQYEMKQKPACVLNFLLPLGDYDVNVTPDKRETFI 382          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A8K1C3K6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3K6_PYTOL)

HSP 1 Score: 299 bits (765), Expect = 1.180e-91
Identity = 156/333 (46.85%), Postives = 213/333 (63.96%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAK-GGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICL----PEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDE--------RKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  +EVKLKE+G + IEVSDNGSGV+P NYE LALK++TSK++TF D+  V SFGFRGEALSSLC+LA  FSV TRT  + +G  L +  +G ++ +    R VGTTV +  +F+PLPVR  +F RNIKK + KLLR +Q YA+    V+++V+NT  K   +Q  + TQ +  + +N+ +VFG KF +TL+ V   L    P E   ++                          +++K D+        R++ G VS+ G GVGR+DNDRQF ++N RP DLP+  +AV++VWR +EMKQKPA +L+  LPP  FDVNVTPDKRE F+
Sbjct:   52 DAGATQIEVKLKEYGKESIEVSDNGSGVTPDNYETLALKHYTSKISTFEDIASVASFGFRGEALSSLCQLAAHFSVCTRTQSDPIGTTLVFNTSGTLVSQIKKARPVGTTVLVEELFKPLPVRAKDFHRNIKKHYAKLLRVLQGYAVSCVNVKLSVSNTTGKHASRQIVLSTQAHQSMGENIASVFGTKFFRTLTGVDFDLNTAWPSEDVSSQAEPE----------------------EESKHDDQDEINKASRRVVGFVSRVGEGVGRSDNDRQFFFINSRPFDLPRVAKAVNDVWRQFEMKQKPACVLNFLLPPHEFDVNVTPDKRETFL 362          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A6A5AJV7_9STRA (DNA_mis_repair domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AJV7_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.320e-91
Identity = 156/321 (48.60%), Postives = 199/321 (61.99%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  VEVKLKEFG    EVSDNG G+  +++  +ALK++TSK+  F DL  V SFGFRGEALSS+C+L+G FSV TRTAD+S+G  L Y ++G ++      R VGTTV + ++F PLPVR  +F +NIKK + K LR +Q YA+IS  V++   N   K   +Q  + T+ N  + +N+ NVFG+KFLKTL  V I LP                                     D    I G VSK G GVGR+DNDRQF Y+NGRPVDL   T+AV+E+WR YEMKQKPA +L+  +PP   DVNVTPDKRE F+
Sbjct:   35 DAGATAVEVKLKEFGHVGFEVSDNGQGIPAADHAAIALKHYTSKIRAFEDLERVVSFGFRGEALSSICQLSGVFSVHTRTADDSIGTLLQYDQHGALISSSKKARAVGTTVIVDDLFLPLPVRYKDFTKNIKKHYGKTLRILQGYAVISSNVKLCCVNIMGKNNLRQQVLSTEANRAVANNIANVFGSKFLKTLVAVDISLP-------------------------------FWPDIIDSAFHITGFVSKVGAGVGRSDNDRQFFYVNGRPVDLLNATKAVNEIWRQYEMKQKPACVLNFVVPPDAVDVNVTPDKRETFV 324          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A2P4YBT7_9STRA (Mismatch repair endonuclease pms1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBT7_9STRA)

HSP 1 Score: 293 bits (749), Expect = 7.200e-91
Identity = 157/322 (48.76%), Postives = 203/322 (63.04%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEE-GTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  +EVKLKEFG D  EVSDNG GV+P NY  LA K++TSK+++F D+  V SFGFRGEALSS+CELA SF+V TRT DE+VGV L Y  +GK++ +    R VGTTV +  +F+PL VR  +F+RNIKK + KLL+ +QAYA+    V+I+V N   K   +   + TQ +  + +NV +VFG KF KTL  V   L      + E                                +R + G VSK G GVGR+DNDRQF ++NGRP DLPK  + ++EVWR YEMKQKPA +++  LP G +DVNVTPDKRE F+
Sbjct:   38 DAGATQIEVKLKEFGRDAFEVSDNGVGVAPENYAFLARKHYTSKISSFEDIETVASFGFRGEALSSICELAKSFTVCTRTKDETVGVLLEYDASGKVVKETKKARPVGTTVIVEELFKPLVVRYKDFQRNIKKHYAKLLKVLQAYAVSCSNVKISVFNITGKNASRHVVLATQAHQTMGENVASVFGTKFFKTLLRVDFELKGSLKAEAEDKDDGSDDANSDSEHKSSVMDNEHNEHILNGQQRMVEGFVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKMLNEVWRQYEMKQKPAGVINFFLPLGDYDVNVTPDKRETFL 359          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A024UUQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 8.490e-91
Identity = 156/321 (48.60%), Postives = 203/321 (63.24%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  VEVKLKEFG    EVSDNG G+  +++  +ALK++TSK+  F DL  V SFGFRGEALSS+C+L+GSFSV TRTAD+S+G  L Y +NG ++      R +GTT+ + ++F PLPVR  +F +NIKK + K LR +Q YA+IS  V+++  N   K   +Q  + T+ N  + +N+ NVFG+KFLKTL  V I LP                                A  + +   KI G VSK G GVGR+DNDRQF ++NGRPVD    T+AV+E+WR YEMKQKPA +L+  LPP   DVNVTPDKRE F+
Sbjct:   38 DAGATTVEVKLKEFGQVGFEVSDNGQGIPEADHAAIALKHYTSKIRAFEDLERVASFGFRGEALSSICQLSGSFSVLTRTADDSIGTLLQYDQNGALVSSSKKARGIGTTIFVDDLFRPLPVRYKDFSKNIKKHYGKTLRILQGYAVISSNVKLSCINIAGKSNARQQVLSTEVNPTIANNIANVFGSKFLKTLLAVDISLP----------------------------YWPDASGSTNSSYKISGFVSKVGAGVGRSDNDRQFFFVNGRPVDFANATKAVNEIWRQYEMKQKPACMLNFVLPPDAVDVNVTPDKRETFL 330          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A833X1G2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X1G2_PHYIN)

HSP 1 Score: 296 bits (758), Expect = 1.280e-90
Identity = 155/321 (48.29%), Postives = 202/321 (62.93%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  +EVKLKEFG D  EVSDNG+GV+P NY  LA K++TSK+++F D+  V SFGFRGEALSS+CELA SF+V TRT +++VG  L Y  +G ++ +    R  GTTV++  +F+PL VR  +F+RNIKK + KLL+ +QAYA+    V+I V N   K   +   + TQ +  + +N+ NVFG KF +TL  V   L     +N                                 ERK+ G VSK G GVGR+DNDRQF ++NGRP DLPK  + ++EVWR YEMKQKPA IL+  LP G +DVNVTPDKRE F+
Sbjct:   40 DAGATQIEVKLKEFGRDAFEVSDNGAGVAPENYASLARKHYTSKISSFEDIETVASFGFRGEALSSICELAASFTVCTRTQNDAVGTLLMYDASGALVKETKKARPTGTTVAVEELFKPLAVRYKDFKRNIKKHYAKLLKVLQAYAVSCANVKICVFNITGKNSSRHVVLATQAHQTMGENIANVFGTKFFRTLIRVDYEL-----KNNVKKEKGGTSDEGDSDGEQKSSTTETEDNLSGQERKVEGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKTLNEVWRQYEMKQKPACILNFLLPLGDYDVNVTPDKRETFV 355          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A329RVK3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RVK3_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.730e-90
Identity = 157/321 (48.91%), Postives = 204/321 (63.55%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  +EVKLKEFG D  EVSDNG+GV+P NY  LA K+ TSK+++F D+  V SFGFRGEALSS+ ELA SF+V TRT +E+VGV L Y  NG ++ +    R +GTTV++  +F+PL VR  +F+RNIKK + KLL+ +QAYA+    V+I V N   K   +   + TQ +  + +N+ NVFG KF +TL  V   L +   +NE                                ERK+ G VSK G GVGR+DNDRQF ++NGRP DLPK  + ++EVWR YEMKQKPA +L+  LP G +DVNVTPDKRE F+
Sbjct:   40 DAGATQIEVKLKEFGRDAFEVSDNGAGVAPENYASLARKHFTSKISSFEDIETVASFGFRGEALSSISELAASFTVCTRTHNEAVGVLLEYDANGALVKETKKARPMGTTVTVEELFKPLAVRYKDFKRNIKKHYAKLLKVLQAYAVSCANVKICVFNITGKNASRHVVLATQAHQTMGENIANVFGTKFFRTLLRVDFEL-KSSLKNEESDKDDVGNEGDSDSEQKSSSMEIE-DNLSGQERKVEGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKTLNEVWRQYEMKQKPACVLNFHLPLGDYDVNVTPDKRETFV 358          
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Match: A0A0W8CYU8_PHYNI (Mismatch repair endonuclease pms1 n=21 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CYU8_PHYNI)

HSP 1 Score: 296 bits (757), Expect = 1.830e-90
Identity = 156/321 (48.60%), Postives = 207/321 (64.49%), Query Frame = 1
Query:    1 DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISRGVRITVTNTKAKGG-KQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQNEXXXXXXXXXXXXXXXXXXXXXXXXXAQKAKDDERKIWGMVSKAGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFM 960
            DAGA  +EVKLKEFG D  EV DNG+GV+P NY  LA K++TSK+++F D+  V SFGFRGEALSS+CELA SF+V TRT +++VG+ L Y  +G ++ +    R VGTTV++  +F+PL VR  +F+RNIKK + KLL+ +QAYA+    V+I V N   K   +   + TQ +  + +N+ NVFG KF +TL  V   L  +G+         X XX                      ERK+ G VSK G GVGR+DNDRQF ++NGRP DLPK  + ++EVWR +EMKQKPA +L+  LP G +DVNVTPDKRE F+
Sbjct:   40 DAGATQIEVKLKEFGRDAFEVGDNGAGVTPENYASLARKHYTSKISSFEDIETVASFGFRGEALSSICELAASFTVCTRTKNDAVGMLLEYDASGTLVKETKKARPVGTTVTVEELFKPLAVRYKDFKRNIKKHYAKLLKVLQAYAVSCANVKICVFNITGKNASRHVVLATQAHQTMGENIANVFGTKFFRTLLRVDFEL--KGSGKSEKDEKDXAXXEGDSDGEQKSSAVEIEDNLSGQERKVEGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKTLNEVWRQFEMKQKPACVLNFLLPLGDYDVNVTPDKRETFV 358          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1276.1691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV66_ECTSI1.990e-19795.36Postmeiotic segregation increased 2 n=2 Tax=Ectoca... [more]
A0A835YM26_9STRA6.000e-11357.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WIM5_GLOUD1.140e-9152.84Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C3K6_PYTOL1.180e-9146.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A5AJV7_9STRA1.320e-9148.60DNA_mis_repair domain-containing protein (Fragment... [more]
A0A2P4YBT7_9STRA7.200e-9148.76Mismatch repair endonuclease pms1 n=1 Tax=Phytopht... [more]
A0A024UUQ3_9STRA8.490e-9148.60Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A833X1G2_PHYIN1.280e-9048.29MutL C terminal dimerization domain n=1 Tax=Phytop... [more]
A0A329RVK3_9STRA1.730e-9048.91Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A0W8CYU8_PHYNI1.830e-9048.60Mismatch repair endonuclease pms1 n=21 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1276contigE-siliculosus-1a_F_contig1276:32804..34556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size984
Model size984
Exons4
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
EggNOG OGsCOG0323@1,KOG1978@2759
EggNOG free text desc.mismatched DNA binding
GOsGO:0000003,GO:0002200,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002566,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009555,GO:0009791,GO:0009987,GO:0010154,GO:0015630,GO:0016020,GO:0016445,GO:0016446,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022414,GO:0030983,GO:0031974,GO:0031981,GO:0032135,GO:0032138,GO:0032300,GO:0032389,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048229,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0061458,GO:0070013,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363,GO:1990391,GO:1990904
KEGG ModuleM00295
KEGG Pathwayko03430,ko03460,map03430,map03460
KEGG koko:K10858
Preferred namePms1
Seed eggNOG ortholog2880.D7FV66
Seed ortholog evalue1e-160
Seed ortholog score572.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1276.1691.1prot_E-siliculosus-1a_F_contig1276.1691.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1276 32804..34556 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927797.7913861-CDS-E-siliculosus-1a_F_contig1276:32803..331031622927797.7913861-CDS-E-siliculosus-1a_F_contig1276:32803..33103Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 32804..33103 +
1696318683.8951547-CDS-E-siliculosus-1a_F_contig1276:32803..331031696318683.8951547-CDS-E-siliculosus-1a_F_contig1276:32803..33103Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 32804..33103 +
1622927797.8051968-CDS-E-siliculosus-1a_F_contig1276:33398..336141622927797.8051968-CDS-E-siliculosus-1a_F_contig1276:33398..33614Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 33399..33614 +
1696318683.9084365-CDS-E-siliculosus-1a_F_contig1276:33398..336141696318683.9084365-CDS-E-siliculosus-1a_F_contig1276:33398..33614Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 33399..33614 +
1622927797.8148131-CDS-E-siliculosus-1a_F_contig1276:33881..341931622927797.8148131-CDS-E-siliculosus-1a_F_contig1276:33881..34193Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 33882..34193 +
1696318683.9179707-CDS-E-siliculosus-1a_F_contig1276:33881..341931696318683.9179707-CDS-E-siliculosus-1a_F_contig1276:33881..34193Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 33882..34193 +
1622927797.8289533-CDS-E-siliculosus-1a_F_contig1276:34400..345561622927797.8289533-CDS-E-siliculosus-1a_F_contig1276:34400..34556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 34401..34556 +
1696318683.927826-CDS-E-siliculosus-1a_F_contig1276:34400..345561696318683.927826-CDS-E-siliculosus-1a_F_contig1276:34400..34556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1276 34401..34556 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1276.1691.1

>prot_E-siliculosus-1a_F_contig1276.1691.1 ID=prot_E-siliculosus-1a_F_contig1276.1691.1|Name=mRNA_E-siliculosus-1a_F_contig1276.1691.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=328bp
DAGAKHVEVKLKEFGVDLIEVSDNGSGVSPSNYEGLALKYHTSKLATFSD
LTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVGVKLAYGRNGKMLGK
ETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYALISR
GVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICL
PEEGTQNEEEEEEEEEVEDKKQGQQGGGATSSGAQKAKDDERKIWGMVSK
AGVGVGRADNDRQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDL
RLPPGTFDVNVTPDKREIFMTGVSGHG*
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mRNA from alignment at E-siliculosus-1a_F_contig1276:32804..34556+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1276.1691.1 ID=mRNA_E-siliculosus-1a_F_contig1276.1691.1|Name=mRNA_E-siliculosus-1a_F_contig1276.1691.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1753bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1276:32804..34556+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GATGCCGGGGCGAAGCACGTGGAGGTGAAGCTCAAGGAGTTCGGTGTGGA CCTCATCGAAGTATCCGACAACGGCTCCGGCGTATCTCCGTCCAACTACG AAGGGCTAGCCCTGAAGTACCACACCTCCAAGCTCGCCACCTTTTCGGAC CTCACCGGTGTCAGATCCTTCGGCTTCAGGGGGGAGGCGCTCAGCTCTCT GTGCGAGCTTGCCGGGTCCTTCTCGGTGACAACGCGGACCGCCGACGAGA GCGTGGGCGTTAAGCTGGCCTACGGGAGGAACGGAAAGATGCTCGGCAAG GTGCAAAGCAGAGAATTTTGTTTCGTAGCGCAAAGCGTTGCCTGCAACGG GTGGGTCACACGTAGTGCGAGCAGGTGGTGTAGTTGCGGTACACACCAGG TAGGCCGCCCCGTGCATCTCACGGGCGGCATGCAAGGTGGTTACGCCGTG CGTCGTACCGGGCATAGCTTCGCTAAAGAGTGTTTGTTTCAGGATAGTTA TGCGCATGCTGACTTAAAAACACCTCCGTTCCAATCCCTGTGCGTCACCA ACTTGGCTCTTTGGTCCCCCGTCCGCCCGACGAATGTGAGCACAGGAGAC GGCGCCGCGTCAAGTCGGGACAACCGTGAGCATATCAAACATGTTCGAGC CGCTGCCCGTTCGGCGTGGAGAGTTCCGACGGAACATCAAGAAGCAGTTC AACAAGCTTCTGCGAGGGATGCAGGCGTACGCCTTGATCAGCCGCGGTGT CCGCATCACCGTCACCAACACCAAGGCCAAGGGGGGCAAGCAAACCCACA TCGGGACACAGGTTGGGTTCATGAATCGGCCATCCGTTCGTGAGAGATGC CGTTAATGCTTGGAGTTGTCAGACTGCATGCGTCCATTCCCTCGCGAGAG ACGCCACTAAATGCTTAGGGTTGTCAGACTTCCGTCATGACCTGTTTATT GTAGAGAGTGCAAGCGTGAGGGCTGTTGCTCCCTGCTTGATGGGGCCACA ACTGCCTTCCCACCCCCCGGACCGGAAAAAAAAAAGGCTGAACAGCAAGT TGTCGTGTCTGTTGCATGTTACCACCAGTACAACAACAAGCTGGATGACA ACGTGACCAACGTGTTTGGAGCCAAGTTTCTGAAGACGCTGTCGCCTGTT AGCATCTGCTTGCCCGAGGAAGGGACGCAGAATGAGGAAGAGGAGGAAGA GGAAGAAGAAGTCGAGGACAAGAAGCAGGGCCAGCAAGGGGGTGGTGCGA CGTCGTCGGGTGCGCAGAAGGCCAAGGACGACGAGCGCAAGATCTGGGGC ATGGTGTCCAAGGCGGGAGTGGGAGTTGGGCGTGCGGACAACGACCGGCA GTTTCTGTACCTGAACGGACGACCTGTCGACCTACCCAAGGTATGACCAA GTGCCAAATTGGGGATGTCTCACCTCGTTGTACCACAAGCAGTTGTTTGT CGTCCTTGGTCCGCTGTACATGATGCCGACATGGAACACAAACAATATTT GGTTCGTGACATCATCCACTTTTTTGGTTTGGTTCCGATCTTATCTTCTT TTTCTCCCTGGCTACGACCACCTGTTGTTGCACTGGCGCGCTGGCAGTTC ACGCGTGCGGTGAGCGAGGTGTGGCGGGCGTACGAAATGAAGCAGAAGCC GGCCTTCATACTTGACCTCAGGCTGCCCCCGGGCACGTTCGACGTCAACG TCACCCCCGACAAGAGGGAAATATTCATGACCGGGGTGAGTGGTCACGGT TAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1276:32804..34556+

>mRNA_E-siliculosus-1a_F_contig1276.1691.1 ID=mRNA_E-siliculosus-1a_F_contig1276.1691.1|Name=mRNA_E-siliculosus-1a_F_contig1276.1691.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1968bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1276:32804..34556+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GATGCCGGGGCGAAGCACGTGGAGGTGAAGCTCAAGGAGTTCGGTGTGGA
CCTCATCGAAGTATCCGACAACGGCTCCGGCGTATCTCCGTCCAACTACG
AAGGGCTAGCCCTGAAGTACCACACCTCCAAGCTCGCCACCTTTTCGGAC
CTCACCGGTGTCAGATCCTTCGGCTTCAGGGGGGAGGCGCTCAGCTCTCT
GTGCGAGCTTGCCGGGTCCTTCTCGGTGACAACGCGGACCGCCGACGAGA
GCGTGGGCGTTAAGCTGGCCTACGGGAGGAACGGAAAGATGCTCGGCAAG
GATGCCGGGGCGAAGCACGTGGAGGTGAAGCTCAAGGAGTTCGGTGTGGA
CCTCATCGAAGTATCCGACAACGGCTCCGGCGTATCTCCGTCCAACTACG
AAGGGCTAGCCCTGAAGTACCACACCTCCAAGCTCGCCACCTTTTCGGAC
CTCACCGGTGTCAGATCCTTCGGCTTCAGGGGGGAGGCGCTCAGCTCTCT
GTGCGAGCTTGCCGGGTCCTTCTCGGTGACAACGCGGACCGCCGACGAGA
GCGTGGGCGTTAAGCTGGCCTACGGGAGGAACGGAAAGATGCTCGGCAAG
GAGACGGCGCCGCGTCAAGTCGGGACAACCGTGAGCATATCAAACATGTT
CGAGCCGCTGCCCGTTCGGCGTGGAGAGTTCCGACGGAACATCAAGAAGC
AGTTCAACAAGCTTCTGCGAGGGATGCAGGCGTACGCCTTGATCAGCCGC
GGTGTCCGCATCACCGTCACCAACACCAAGGCCAAGGGGGGCAAGCAAAC
CCACATCGGGACACAGGAGACGGCGCCGCGTCAAGTCGGGACAACCGTGA
GCATATCAAACATGTTCGAGCCGCTGCCCGTTCGGCGTGGAGAGTTCCGA
CGGAACATCAAGAAGCAGTTCAACAAGCTTCTGCGAGGGATGCAGGCGTA
CGCCTTGATCAGCCGCGGTGTCCGCATCACCGTCACCAACACCAAGGCCA
AGGGGGGCAAGCAAACCCACATCGGGACACAGTACAACAACAAGCTGGAT
GACAACGTGACCAACGTGTTTGGAGCCAAGTTTCTGAAGACGCTGTCGCC
TGTTAGCATCTGCTTGCCCGAGGAAGGGACGCAGAATGAGGAAGAGGAGG
AAGAGGAAGAAGAAGTCGAGGACAAGAAGCAGGGCCAGCAAGGGGGTGGT
GCGACGTCGTCGGGTGCGCAGAAGGCCAAGGACGACGAGCGCAAGATCTG
GGGCATGGTGTCCAAGGCGGGAGTGGGAGTTGGGCGTGCGGACAACGACC
GGCAGTTTCTGTACCTGAACGGACGACCTGTCGACCTACCCAAGTACAAC
AACAAGCTGGATGACAACGTGACCAACGTGTTTGGAGCCAAGTTTCTGAA
GACGCTGTCGCCTGTTAGCATCTGCTTGCCCGAGGAAGGGACGCAGAATG
AGGAAGAGGAGGAAGAGGAAGAAGAAGTCGAGGACAAGAAGCAGGGCCAG
CAAGGGGGTGGTGCGACGTCGTCGGGTGCGCAGAAGGCCAAGGACGACGA
GCGCAAGATCTGGGGCATGGTGTCCAAGGCGGGAGTGGGAGTTGGGCGTG
CGGACAACGACCGGCAGTTTCTGTACCTGAACGGACGACCTGTCGACCTA
CCCAAGTTCACGCGTGCGGTGAGCGAGGTGTGGCGGGCGTACGAAATGAA
GCAGAAGCCGGCCTTCATACTTGACCTCAGGCTGCCCCCGGGCACGTTCG
ACGTCAACGTCACCCCCGACAAGAGGGAAATATTCATGACCGGGGTGAGT
GGTCACGGTTAGTTCACGCGTGCGGTGAGCGAGGTGTGGCGGGCGTACGA
AATGAAGCAGAAGCCGGCCTTCATACTTGACCTCAGGCTGCCCCCGGGCA
CGTTCGACGTCAACGTCACCCCCGACAAGAGGGAAATATTCATGACCGGG
GTGAGTGGTCACGGTTAG
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