mRNA_E-siliculosus-1a_F_contig12752.1688.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.770e-105 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 1
Query: 28 SVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
SVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADG VVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE
Sbjct: 179 SVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGTVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 342
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI) HSP 1 Score: 229 bits (584), Expect = 4.970e-70 Identity = 112/168 (66.67%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 28 SVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMAD-----GKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNL 516
S YRH+ A P +SA+RFLVACGTRP+R PD+PFDG+ +FDSDQLLWGG+ +PRDLIVVGAGVIGMEYA MINV+PGTTVTVIDPR VL FAD +V + L Y+MR+NGARFLL E + +EK+ G V+AHL SGKRV GDALLY MGR GNTDS++L
Sbjct: 127 SPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGITHIPRDLIVVGAGVIGMEYACMINVVPGTTVTVIDPRPTVLSFADNDVIENLQYTMRQNGARFLLNEHITRIEKIEKKDSNGGVKVIAHLASGKRVVGDALLYTMGRQGNTDSMDL 294
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.770e-69 Identity = 117/168 (69.64%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 28 SVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKV-----VVAHLLSGKRVKGDALLYAMGRLGNTDSLNL 516
S YRH++A++ + LSA+ L+ACGTRPLR +PFDG RVFDSDQLLWGGV VPR+L+VVGAGVIGMEYASM+N+IPGT VTVIDPRD++LGFAD EV QAL YSMR GARFLL EKV+ VEK G VVAHL SGK+V GDA+LYAMGR GNTDSL+L
Sbjct: 204 SAYRHLDANMAKMALSAENVLIACGTRPLRPAHIPFDGVRVFDSDQLLWGGVRDVPRELMVVGAGVIGMEYASMMNIIPGTNVTVIDPRDKMLGFADTEVVQALMYSMRTKGARFLLNEKVERVEKTDAGGSGGRGRVVAHLSSGKKVVGDAMLYAMGRQGNTDSLSL 371
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A5D6XJI3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI3_9STRA) HSP 1 Score: 211 bits (538), Expect = 6.790e-63 Identity = 104/166 (62.65%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNL 516
T RH AS+ L+AD+FL+A GTRP RRPD+PFDG +FDSDQLLWGGV VP+ LIVVGAGVIGMEYASM+N+IPG VT+ID R E+L ADREV++ALCYSMR++GARF + E +K VEK +G+V+V HL SGK + GD LLY +GR GNT+ L+L
Sbjct: 178 TATDAKRHSSASICKRVLTADKFLIAVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPKRLIVVGAGVIGMEYASMMNIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQSGARFFVEETIKRVEKAENGEVIV-HLNSGKSLVGDGLLYTLGRQGNTEGLDL 342
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: K3WL68_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL68_GLOUD) HSP 1 Score: 210 bits (535), Expect = 2.040e-62 Identity = 106/166 (63.86%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNL 516
T RH A + L+AD+FL+A GTRP RRPD+PFDG VFDSDQLLWGGV VP+ LIVVGAGVIGMEYASM+++IPG VT+ID R E+L ADREV++ALCYSMR+ GARF + E +KSVEK+ +G+V+V HL SGK + GD LLY +GR GNTD LNL
Sbjct: 182 TATDAKRHASADICKRVLTADKFLIAVGTRPARRPDIPFDGQAVFDSDQLLWGGVKTVPKRLIVVGAGVIGMEYASMMSIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQTGARFFVEETIKSVEKV-NGEVIV-HLNSGKTLVGDGLLYTLGRQGNTDGLNL 345
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A6A3FH22_9STRA (Putative soluble pyridine nucleotide transhydrogenase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FH22_9STRA) HSP 1 Score: 210 bits (534), Expect = 3.370e-62 Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
T RH A + L+AD+FLV GTRP RRPD+PFDG +FDSDQLLWG V VPR LIVVGAGVIGMEYASM+ +IPGT VTVID R E+L AD+EV++ALCYSM + G RFL+GE +KSVEK G+V V HL SGK V GD LLY +GR GN + LNLE
Sbjct: 187 TATDAKRHTSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVKTVPRRLIVVGAGVIGMEYASMMTIIPGTDVTVIDGRQEILNMADKEVSEALCYSMAQTGTRFLVGETIKSVEKTPKGEVFV-HLESGKTVVGDGLLYTVGRQGNVEGLNLE 352
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A225VHW9_9STRA (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VHW9_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.660e-60 Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 1
Query: 61 SVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
S L+AD+FLV GTRP RRPD+PFDG +FDSDQLLWG V VPR LI+VGAGV+GMEYASM+ +IPGT VTVID R E+L AD+EV++ALCYSM + G RFL+GE +KSVEK +G+V V HL SGK V GD LLY +GR GN + LNLE
Sbjct: 7 SSVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVKTVPRRLIIVGAGVVGMEYASMMTIIPGTDVTVIDGRQEILNMADKEVSEALCYSMSQTGTRFLVGETIKSVEKTPNGEVFV-HLESGKTVVGDGLLYTVGRQGNVEGLNLE 158
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A3M6VF88_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF88_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.960e-60 Identity = 104/167 (62.28%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
T RH A + L+AD FLV GTRP RRP +PFDG +FDSDQLLWG V VPR LIVVGAGV+GMEYASM+ +IPGT VTVID R E+L AD+EV++ALCYSM + G RFL+ E +KSVEK A+G+V+V HL SGK V GD LLY +GR GN + LNLE
Sbjct: 203 TATDANRHSSADICKRVLTADNFLVCVGTRPARRPGIPFDGETIFDSDQLLWGKVKSVPRRLIVVGAGVVGMEYASMMTIIPGTDVTVIDGRKEILDVADKEVSEALCYSMAQTGTRFLVNEIIKSVEKSANGEVIV-HLESGKTVVGDGLLYTVGRQGNVEGLNLE 368
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A8J5JAY8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JAY8_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.420e-59 Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
T RH A + L+AD+FLV GTRP RRPD+PFDG +FDSDQLLWG V+ VPR LI+VGAGV+GMEYASM+ +IPGT VTVID R E+L AD++V++ALCYSM + G RFL GE +KSVEK G+V V HL SGK V GD LLY +GR GN + L+LE
Sbjct: 182 TATDAKRHTSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVESVPRRLIIVGAGVVGMEYASMMTIIPGTDVTVIDGRQEILNMADKQVSEALCYSMAQTGTRFLTGETIKSVEKSPKGEVFV-HLESGKTVVGDGLLYTVGRQGNVEGLDLE 347
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Match: A0A0P1AKW9_PLAHL (Soluble pyridine nucleotide n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKW9_PLAHL) HSP 1 Score: 203 bits (517), Expect = 1.600e-59 Identity = 104/167 (62.28%), Postives = 121/167 (72.46%), Query Frame = 1
Query: 19 TLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARFLLGEKVKSVEKMADGKVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLE 519
T RH A + L+AD+FL+ GTRP RR D+PFDG +FDSDQLLWG V VPR LIVVGAGVIGMEYASM+ +IPGT VTVID R E+L AD EV++ALC+SM + G RFL GE +KSVEK A G+V V HL SGK V GD LLY +GR GN + LNLE
Sbjct: 167 TATDAQRHSSADICKRVLTADKFLLCVGTRPARRADIPFDGETIFDSDQLLWGKVKSVPRRLIVVGAGVIGMEYASMMTIIPGTDVTVIDARKEILNMADNEVSEALCFSMAQTGTRFLTGEVIKSVEKSAMGEVFV-HLESGKTVVGDGLLYTVGRQGNVEGLNLE 332 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12752.1688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12752.1688.1 >prot_E-siliculosus-1a_F_contig12752.1688.1 ID=prot_E-siliculosus-1a_F_contig12752.1688.1|Name=mRNA_E-siliculosus-1a_F_contig12752.1688.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=173bp MTCVRHTLCSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVback to top mRNA from alignment at E-siliculosus-1a_F_contig12752:413..1353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12752.1688.1 ID=mRNA_E-siliculosus-1a_F_contig12752.1688.1|Name=mRNA_E-siliculosus-1a_F_contig12752.1688.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=941bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12752:413..1353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12752:413..1353- >mRNA_E-siliculosus-1a_F_contig12752.1688.1 ID=mRNA_E-siliculosus-1a_F_contig12752.1688.1|Name=mRNA_E-siliculosus-1a_F_contig12752.1688.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1038bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12752:413..1353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |