mRNA_E-siliculosus-1a_F_contig1275.1685.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI) HSP 1 Score: 531 bits (1367), Expect = 1.930e-190 Identity = 256/270 (94.81%), Postives = 262/270 (97.04%), Query Frame = 1
Query: 1 MAGITLRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLDTFFAEG 807
M GITLRSFAEGNESGPTVVFVHGWPDDHTLWD+Q + L DRYRCVTTDLPGFSGDEDGD GTAS SKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPF+PRCPVLFMYGSAG+KKLMRFHADWWVDKI K+ GSSVVE+TEASHWLMRGRGGDVVNARLDTFFAEG
Sbjct: 1 MVGITLRSFAEGNESGPTVVFVHGWPDDHTLWDAQVAHLKDRYRCVTTDLPGFSGDEDGDGGTASSSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFFAEG 270
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI) HSP 1 Score: 286 bits (733), Expect = 6.150e-94 Identity = 138/265 (52.08%), Postives = 188/265 (70.94%), Query Frame = 1
Query: 16 LRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSL-SLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLDTFFAE 804
LR+FA G E GP ++FVHGWPDDH LWD+Q + L DR+RCVTTDLPGFSGD+ A KWGYS EEV KR+ERT E VG G+P+ +VAHD+GC Y+F E RPDLV+K+VA+DVGG + PS+ + + YQ +L AFL+G IGD +AR FA L G+P+ + +ARAS CYPY H WK + + + P +P+CP++F++G+AG+KK+M FHA W +K++++ GSS + +ASHW+ R + + VN RLD F A+
Sbjct: 15 LRTFASGKEDGPVILFVHGWPDDHLLWDAQVTHLKDRFRCVTTDLPGFSGDD------ARVEKWGYSTEEVVKRIERTAERVGNGQPIILVAHDFGCMYSFKFEAKRPDLVRKMVAIDVGGAMK--PSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQP-EEVNRRLDEFLAD 270
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.230e-92 Identity = 139/266 (52.26%), Postives = 182/266 (68.42%), Query Frame = 1
Query: 16 LRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSL-SLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLG-MGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLDTFFAE 804
LR F++G + GP ++FVHGWPDDH +WD Q + L DRYRCVTTDLPGF D D A K GYS +E+ +RLERTIE G G+PV ++AHDWGC ++F++EKNRP+LVK++VA+DVGG + P L SL+ I Y +L+ AF +GG IGD MAR FARL GAPA + VA A CYPY H+WK ++ G MG +P P+LF YG+AG K++M FHADWW K+ + GS V MT + HW+ + D+ N +LD F +
Sbjct: 48 LRMFSDGKDDGPVLLFVHGWPDDHQMWDKQVAHLKDRYRCVTTDLPGFGADSD--EYDADVEKNGYSIDEIVRRLERTIEKAGNGEPVTLIAHDWGCTFSFLVEKNRPELVKRMVAIDVGGAVE--PGLGSLIIIMSYHLWLIAAFRVGGPIGDVMARSFARLVGAPAGARVATARSCYPYYHYWKRKLDKSQGPMGNLMPGAPLLFAYGTAGYKRVMPFHADWWAKKVNDKEGSLSVAMTRSKHWVTVDQPDDL-NRKLDAFLEK 308
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: A0A524NWT2_9DELT (Alpha/beta hydrolase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NWT2_9DELT) HSP 1 Score: 164 bits (414), Expect = 6.610e-46 Identity = 91/256 (35.55%), Postives = 136/256 (53.12%), Query Frame = 1
Query: 1 MAGITLR--SFAEGNESGPTVVFVHGWPDDHTLWDSQASKLD-RYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLG--MGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMR 753
M +TLR + G +SG T+VF+ GWPDD TLWD+ L RYRCV T +P F G +WGYS +E+ + L I ++ PV ++ HDWGC++ L +P LV ++ LDV + P L++L I YQ +L+ AF++ GR+GD M R A AP + + YPY + W+ + C M + P+ P+LF+YG +K FH+ W++ + K TG V + + HW+ R
Sbjct: 2 MTAVTLRLDAIVAGPDSGETLVFIQGWPDDATLWDANVVSLSARYRCVRTTMPNFDG--------RRSVRWGYSTDEIVEALAEMIREISPNAPVTLILHDWGCYWGHTLHHRQPHLVARVAGLDVAPNVEPGP-LAILGIIAYQWWLIGAFVLDGRLGDWMTRALAGAMDAPLPRDQINSWMNYPYRNAWQDILSGCAKAQMDSYWPQVPLLFVYGK---RKPFPFHSKKWIEHVEK-TGGKAVGL-DCGHWVSR 243
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: A0A7Y3AYU9_9GAMM (Alpha/beta hydrolase n=2 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y3AYU9_9GAMM) HSP 1 Score: 164 bits (414), Expect = 7.380e-46 Identity = 96/279 (34.41%), Postives = 152/279 (54.48%), Query Frame = 1
Query: 1 MAGITLRSFA-EGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGG---RIGDAMARGFARLAGAPA---ASTVARASVCYPYIHFWKSQI---QTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLDTFFAE 804
M+G F+ +G +G T++F+HGWPDD +LWDSQ + L +RCV+ LP F G + G+ F E+ ++L TI PV +V HDWG + +MLEK RPDLV ++ +LD+GG L S + I YQ L+ +L+GG +G+ M+RG ++ P+ ++R S YPY + W++ + + +G + PRCP+L+++G+ +K + FH+D W+ KI + +G + + A HWLM +V D F E
Sbjct: 1 MSGTVTWEFSIQGKPNGRTLLFIHGWPDDPSLWDSQVAALAPDFRCVSVTLPNF--------GPTAVKPGGFDFPELVEQLANTIARASPDGPVGLVTHDWGAYIGYMLEKERPDLVDRMASLDIGGHLKPEGLKSSMMIMGYQWALIGGWLVGGILPPLGNLMSRGVGKVVRVPSRQRGKILSRYS--YPYFYLWRNMLLPWRKSKLLGRYTPRCPILYLWGN---RKPLMFHSDRWL-KIVEDSGGKAIGIDGAGHWLMETHAPEVTKHISDWFGGE 265
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: A0A7Y2YWV2_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YWV2_9GAMM) HSP 1 Score: 157 bits (398), Expect = 1.760e-43 Identity = 95/261 (36.40%), Postives = 132/261 (50.57%), Query Frame = 1
Query: 31 EGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRI---GDAMARGFARLAGAPAAS-TVARASVCYPYIHFWKSQI---QTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLD 789
+GN GPT+VF+HGWPD+ +LW Q L + YRCV LP F G + G F E+ +RL TI V V +V HDWG + +MLE+ PDL ++ ALDVGG L + L I YQ L+ +L GG I G M RG AR+ G P + R+ YPY +FW+ + + +G + PRCPVL+++G +K + FH+ W+ + G S + A HW M +V LD
Sbjct: 13 QGNSEGPTLVFIHGWPDNASLWRKQVEALGEAYRCVLVTLPNF--------GAQAVQAGGCDFPELVERLAATIRQVQPEGKVSLVTHDWGAYVGYMLEQKYPDLFDRMAALDVGGHLKPLSLKATLLIIGYQWSLVACWLAGGLIPPLGRLMTRGVARVVGVPKRQRAILRSRYNYPYFYFWRGSLLPWKRSSVLGRYRPRCPVLYLFGE---RKPVMFHSPKWLQIVADSGGGSR-GIAGAGHWFMETHADEVNRIMLD 261
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: A0A161JJ08_9GAMM (AB hydrolase-1 domain-containing protein n=1 Tax=Dyella thiooxydans TaxID=445710 RepID=A0A161JJ08_9GAMM) HSP 1 Score: 152 bits (383), Expect = 3.370e-41 Identity = 91/256 (35.55%), Postives = 129/256 (50.39%), Query Frame = 1
Query: 1 MAGITLRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKL-DRYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVG--GGLSFWPSLSLLSIAL---YQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLM 750
+A I + EG S VV +HGWPD H LWD+ L DRYRCV DLPGF G A + Y+ +EV + + R + + G+ V ++ HDWGC++ + P LV +++ +D+G G + L L IA YQ +L +A+ IGGRIGDAMARG AR+ P A + YPY W F P CP+L++YG +K H+ W++ I GS + + HW+M
Sbjct: 3 VADIEVHVEGEGPAS---VVMIHGWPDTHRLWDASVDALSDRYRCVRFDLPGF--------GRAHPRR-AYAIDEVVEAIHRVVVEACPGERVCLLLHDWGCYFGYKFAMRHPHLVARVIGVDIGDAGSVDHRRELGLSGIAAVVAYQLWLALAWRIGGRIGDAMARGMARVLHCPGDPRAVTAQMGYPYAVSWLGVAGGSHDRRVFAPHCPMLYVYGE---RKPFTLHSTRWIEAIAALPGSRALGLP-GGHWVM 242
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: UPI001A935CC7 (alpha/beta hydrolase n=1 Tax=Rubrivivax gelatinosus TaxID=28068 RepID=UPI001A935CC7) HSP 1 Score: 150 bits (380), Expect = 9.680e-41 Identity = 87/261 (33.33%), Postives = 140/261 (53.64%), Query Frame = 1
Query: 1 MAGITLRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKLDR-YRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLS------IALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRG 762
+ G+T+ +G + T+VFVHGWPD H +WDSQ + L +RC+ LPGF+ +DG A S +E+ L ++ G+PV +V HDWGCF+ + + D V+ +VA+D+GG + + + YQ L +A+ +GGR GDA+AR A APAA RA++ +PY W F+P+CP+L++YG+ +K FH+ W+++++ G V+ + +A HW+M +G
Sbjct: 3 VGGVTVHIEGQGEQ---TLVFVHGWPDSHQVWDSQVAALSASWRCLRFTLPGFAPGDDGRA---------RSLDEIVATLLAVVDAASPGQPVVLVLHDWGCFFGYRFAERHGDRVRAIVAIDIGGDAGSRANRAEMGWRGQAGALAYQLTLALAWRLGGRAGDAVARALAGAFRAPAAGET-RAAMGWPYAVQWFGAAGGFGRPRVFLPQCPMLYVYGT---RKPFMFHSRRWLERLQASPGCGVLAL-DAGHWVMIQQG 246
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: B5JVQ5_9GAMM (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JVQ5_9GAMM) HSP 1 Score: 149 bits (375), Expect = 7.890e-40 Identity = 93/275 (33.82%), Postives = 144/275 (52.36%), Query Frame = 1
Query: 40 ESGP-----TVVFVHGWPDDHTLWDSQASKLD-RYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVG---KGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPS-LSLLSIALYQTYLMVAFLI------GGRIGDAMARG-------FARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMRGRGGDVVNARLDTF 795
+SGP T+VF+HG+PDD ++WD Q + + R+RC+ +LP F GD D GY FE V ++L + KG P+ +V HDWG Y ++ + P+ VK+LVALDVG + P+ + L + YQ L AFLI G +G+ + +G F P T ++ YPY +FWK + L + +P P F YG+ G+KK+M FH + W+ K+ ++ + VV ++SHWLMR + +N +++F
Sbjct: 20 DSGPKDAEETLVFLHGYPDDSSMWDLQVAYFEKRFRCLRPELPNF-GDRVEDPA-------GYDFESVIRQLGDALGAHSPKLKG-PLTLVVHDWGAVYGYLFAERYPERVKRLVALDVGAAIKKQPNPIGYLMVPAYQLTLASAFLISRVPAIGPFVGNLLTKGILAGLGLFGSQYSGPTRRTPLSPALNYPYYYFWKGVLTGQLPLSMKLPDIPFFFAYGTRGLKKVMMFHDEAWLKKVSQKATNKVVAFEQSSHWLMRDEP-EKLNREIESF 284
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Match: A0A4Q6ER22_9PROT (Alpha/beta hydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6ER22_9PROT) HSP 1 Score: 145 bits (367), Expect = 8.080e-39 Identity = 90/248 (36.29%), Postives = 135/248 (54.44%), Query Frame = 1
Query: 28 AEGNESGPTVVFVHGWPDDHTLWDSQASKLD-RYRCVTTDLPGFSGDEDGDAGTASGSKWGYSFEEVAKRLERTIEDVGK-GKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGG---RIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGP-FIPRCPVLFMYGSAGIKKLMRFHADWWVDKIRKQTGSSVVEMTEASHWLMR 753
A G + P ++FVHGWPD+ TLW SQ ++ RY CV LPGF +ED +AG FEE+A RL T+ + + G + +V HDWG + +++ E+ R V +L+ +DVG + + + YQ YL+ A+ +G G+ ++R FA+ GAPAA + R+ + Y Y HFW+ + + P + P CP+LF+YG+ K FHA W +I + GS + A HWLMR
Sbjct: 9 ASGAKKNPLMLFVHGWPDNETLWQSQVAEFSSRYHCVAVRLPGFGPNEDINAGA--------DFEELAARLHATVAETRQPGASLTLVGHDWGAYLSYLYEQ-RYGGVDRLITMDVGAEVKPSSVVHAGFLVSYQWYLIGAWALGKVAPPAGNFLSRLFAKAGGAPAAD-LTRSRMNYLYAHFWRQILSGTRALRPGYEPACPILFLYGA---DKKFLFHAPDWEKRINELPGSEAHGILGAGHWLMR 243 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1275.1685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1275.1685.1 >prot_E-siliculosus-1a_F_contig1275.1685.1 ID=prot_E-siliculosus-1a_F_contig1275.1685.1|Name=mRNA_E-siliculosus-1a_F_contig1275.1685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=270bp MAGITLRSFAEGNESGPTVVFVHGWPDDHTLWDSQASKLDRYRCVTTDLPback to top mRNA from alignment at E-siliculosus-1a_F_contig1275:15653..19953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1275.1685.1 ID=mRNA_E-siliculosus-1a_F_contig1275.1685.1|Name=mRNA_E-siliculosus-1a_F_contig1275.1685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4301bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1275:15653..19953- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1275:15653..19953- >mRNA_E-siliculosus-1a_F_contig1275.1685.1 ID=mRNA_E-siliculosus-1a_F_contig1275.1685.1|Name=mRNA_E-siliculosus-1a_F_contig1275.1685.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1620bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1275:15653..19953- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |