mRNA_E-siliculosus-1a_F_contig12722.1670.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A653UA34_9GAMM (Acyl-CoA dehydrogenase n=106 Tax=root TaxID=1 RepID=A0A653UA34_9GAMM) HSP 1 Score: 963 bits (2490), Expect = 0.000e+0 Identity = 478/498 (95.98%), Postives = 485/498 (97.39%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGCLLEGGEVKAP GFKEAYQQYVEGGWPSLAADP HGGQGLPPSLAM+LSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVP +GDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGV+CGSLEHKMGIHGNATCVMNFD ATGYLVG PNKGLACMFTMMNAARLGVGIQGLGL+EASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLD+VEHGEPGEER+ A+TLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIH FCK EADNP LKEFV PLA LNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQAS SLEGDDKAFYAAKLNT
Sbjct: 64 EGCLLEGGEVKAPNGFKEAYQQYVEGGWPSLAADPAHGGQGLPPSLAMLLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPADGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVTCGSLEHKMGIHGNATCVMNFDDATGYLVGPPNKGLACMFTMMNAARLGVGIQGLGLVEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDLVEHGEPGEERDHAETLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHKFCKAEADNPALKEFVGPLAKLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASISLEGDDKAFYAAKLNT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A368U3E0_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A368U3E0_9GAMM) HSP 1 Score: 900 bits (2327), Expect = 0.000e+0 Identity = 445/498 (89.36%), Postives = 467/498 (93.78%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGC LEGGEVKAPKGFKEAYQQYVEGGWPSLAADP GGQGLP SLAM+LSEMICATNLAWGMYPGLSHGAADALRHHGT+EQKATYLTKLVEGVWTG+MCLTE HCGTDLGLIKTRAVP G Y I+GTKIFISAG+H+LAENIVHLVLAKLP APEGSKGISLFVVPK+LPDA G GE NGV+CGSLEHKMGIHGNATCVMNFD A GYLVGAPNKGLACMFTMMNAARLGVGIQGLGL EASFQNSL+YARDRLQMR LSG Q+PEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGE ERERA+TLLGLLTPIVKAFLTEVGFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGE+LK+FTKEIH FCK EADNPVLK FVEPLA LNAEWGELT+G+GMKAMQDREEVGAASVDYLMYSGYVTLAYLFARA KQAS SLEGD+ AFY AK++T
Sbjct: 64 EGCRLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPAQGGQGLPHSLAMVLSEMICATNLAWGMYPGLSHGAADALRHHGTEEQKATYLTKLVEGVWTGSMCLTEPHCGTDLGLIKTRAVPAAGGGYDISGTKIFISAGDHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKYLPDADGGPGEHNGVACGSLEHKMGIHGNATCVMNFDAARGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLTEASFQNSLAYARDRLQMRALSGPQSPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEDNSERERAETLLGLLTPIVKAFLTEVGFEATNEGVQVFGGHGFIREWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETLKLFTKEIHQFCKAEADNPVLKAFVEPLAKLNAEWGELTLGIGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAVKQASQSLEGDETAFYQAKIDT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A1P8R5H3_9GAMM (Acyl-CoA dehydrogenase n=10 Tax=Halomonadaceae TaxID=28256 RepID=A0A1P8R5H3_9GAMM) HSP 1 Score: 887 bits (2292), Expect = 0.000e+0 Identity = 437/498 (87.75%), Postives = 465/498 (93.37%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGCLLEGG+VKAPKGFK+AYQQYVEGGWPSL+A+P+ GGQGLP SL M+LSEMICATNLAWGMYPGLSHGAADALRHHG+D QKATYLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVPT+ Y ITGTKIFISAGEH+LAENIVHLVLAKLP APEGSKGISLFVVPK+LP+ G GERNGV CGSLEHKMGIHGNATCVMNFD A GYLVGAPNKGLACMFTMMN AR+GVGIQGLGL EASFQNSL+YARDRLQMR LSG +APEK ADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQM+DVVEHG+ ERERA+TLLGLLTPIVKAFLTEVGFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGE+LK FTKEIH FC+ EADNP L EF++PLA LNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASA+LEGD+ AFY AKL+T
Sbjct: 64 EGCLLEGGDVKAPKGFKQAYQQYVEGGWPSLSAEPEFGGQGLPHSLGMVLSEMICATNLAWGMYPGLSHGAADALRHHGSDAQKATYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPTDDGGYEITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKYLPNQAGEPGERNGVVCGSLEHKMGIHGNATCVMNFDAAKGYLVGAPNKGLACMFTMMNVARIGVGIQGLGLTEASFQNSLAYARDRLQMRALSGAKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMVDVVEHGQDAAERERAETLLGLLTPIVKAFLTEVGFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETLKAFTKEIHKFCQAEADNPALAEFIKPLAKLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASAALEGDEHAFYQAKLDT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: UPI001D0A657F (acyl-CoA dehydrogenase C-terminal domain-containing protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A657F) HSP 1 Score: 887 bits (2291), Expect = 0.000e+0 Identity = 439/499 (87.98%), Postives = 464/499 (92.99%), Query Frame = 1
Query: 1 EGCL-LEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
+GC L+ G+VKAP GF+EAY+QYV+GGWP LAADP+HGGQGLP SLAM LSEMICA+NLAWGMYPGLSHGAADALRHHG+D Q+ATYLTKLVEG WTGTMCLTE HCGTDLGLIKTRAVP EGDAY ITGTKIFISAGEH+LAENIVHLVLAKLP APEGSKGISLFVVPKFLPD GN GERNGV CGSLEHKMGIHGNATCVMNFD A GYLVG P+KGLACMFTMMNAARLGVGIQGLGL+EASFQNSL+YARDRLQMR LSGK+APEKPADPII HPDVRRMLLTQKAFAEGGRMLVLY AQ+LD VEHG GEERERAD LLGLLTPIVKAFLTEVGFESTNEGVQI+GGHG+IKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIH FCKTEAD+PVL EF+EPLA LNAEWGELTMG+GMKA+QDREEVGAASVDYLMYSGYV LAYLFARA K ASA LEGDD+AFY AK++T
Sbjct: 64 QGCRRLDNGDVKAPDGFREAYRQYVKGGWPGLAADPEHGGQGLPASLAMALSEMICASNLAWGMYPGLSHGAADALRHHGSDAQQATYLTKLVEGTWTGTMCLTEPHCGTDLGLIKTRAVPVEGDAYRITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKFLPDGAGNPGERNGVVCGSLEHKMGIHGNATCVMNFDDAIGYLVGPPHKGLACMFTMMNAARLGVGIQGLGLVEASFQNSLAYARDRLQMRALSGKKAPEKPADPIIHHPDVRRMLLTQKAFAEGGRMLVLYAAQLLDRVEHGAEGEERERADALLGLLTPIVKAFLTEVGFESTNEGVQIFGGHGYIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHKFCKTEADHPVLGEFIEPLAKLNAEWGELTMGIGMKAIQDREEVGAASVDYLMYSGYVALAYLFARAVKSASAGLEGDDQAFYKAKIDT 562
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A2A2EZ20_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A2EZ20_9GAMM) HSP 1 Score: 884 bits (2285), Expect = 0.000e+0 Identity = 436/498 (87.55%), Postives = 465/498 (93.37%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGCLLEGG+VKAPKGFK+AYQQYVEGGWPSL+A+P+ GGQGLP SL M+LSEMICATNLAWGMYPGLSHGAADALRHHG+D QKATYLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVPT A+ ITGTKIFISAG+H+LAENIVHLVLAKLP AP+GSKGISLFVVPK+LP+ G GERNGV CGSLEHKMGIHGNATCVMNFD A GYLVGAPNKGLACMFTMMN AR+GVGIQGLGL EASFQNSL YARDRLQMR LSG +APEK ADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQM+DVVEHG+ ERERA+TLLGLLTPIVKAFLTEVGFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGE+LKVFTKEIH FC+ EADNPVL EF++PLA LNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAK ASA+LEGD+ AFY AKL+T
Sbjct: 64 EGCLLEGGDVKAPKGFKQAYQQYVEGGWPSLSAEPEFGGQGLPHSLGMVLSEMICATNLAWGMYPGLSHGAADALRHHGSDAQKATYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPTADGAFEITGTKIFISAGDHDLAENIVHLVLAKLPDAPQGSKGISLFVVPKYLPNEAGEPGERNGVVCGSLEHKMGIHGNATCVMNFDAAKGYLVGAPNKGLACMFTMMNVARIGVGIQGLGLTEASFQNSLGYARDRLQMRALSGPKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMVDVVEHGQDAAERERAETLLGLLTPIVKAFLTEVGFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETLKVFTKEIHKFCQAEADNPVLAEFIKPLAKLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKHASAALEGDEHAFYQAKLDT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: S2L725_HALAF (Acyl-CoA dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=S2L725_HALAF) HSP 1 Score: 868 bits (2242), Expect = 1.980e-314 Identity = 424/498 (85.14%), Postives = 461/498 (92.57%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGCLLEGGEVKAPKGFKEAY+QYVEGGWPSL+A+P+ GGQGLPPSL M+LSEMICA+NLAWGMYPGLSHGAADALRHHG+DEQKATYLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVP +Y ITGTKIFISAGEH+LAENIVHLVLAKLP APEGSKGISLFVVPKFLPDA GN GERNGV+CGSLEHKMGIHGNATCVMNFD A G+LVGAPNKGLACMFTMMN AR+GVGIQGLGL EASFQN+L YARDRLQMR LSG +A +KPADPIIVHPDVRRMLLTQKAFAEGGRMLV+YTAQM+D+VEHG+ ERERA+ LLGLLTP+VKAFLTE GFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTG+QALDLLGRKVLMSQGE+LKVFTKEIH FC+ EADN LKEF+ PLA LN EWG+LTMGVG+KAM DREEVGAASVDYL+Y+GYVTLAYL+ARAAKQA SL G++ AFY AKL+T
Sbjct: 64 EGCLLEGGEVKAPKGFKEAYRQYVEGGWPSLSAEPEFGGQGLPPSLGMVLSEMICASNLAWGMYPGLSHGAADALRHHGSDEQKATYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPAADGSYDITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKFLPDADGNPGERNGVACGSLEHKMGIHGNATCVMNFDNAKGFLVGAPNKGLACMFTMMNVARIGVGIQGLGLAEASFQNALVYARDRLQMRALSGPKAVDKPADPIIVHPDVRRMLLTQKAFAEGGRMLVMYTAQMVDLVEHGQDAAERERAELLLGLLTPVVKAFLTETGFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGVQALDLLGRKVLMSQGETLKVFTKEIHKFCQAEADNAELKEFIAPLAKLNGEWGDLTMGVGVKAMHDREEVGAASVDYLIYAGYVTLAYLWARAAKQAQQSLGGEEDAFYKAKLDT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A455UIK8_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455UIK8_9GAMM) HSP 1 Score: 857 bits (2213), Expect = 8.470e-312 Identity = 425/451 (94.24%), Postives = 438/451 (97.12%), Query Frame = 1
Query: 142 MMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
M+LSEMICATNLAWGMYPGLSHGAADAL+HHGTDEQK+TYLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVP +GDAYAITGTKIFISAGEH+LAENI+HLVLAKLP APEGSKGISLFVVPKFLPDAQGNVGERN VSCGSLEHKMGIHGNATCVMNFDGATGYLVG PNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAP+KPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLD+VEHG+PGEER+ A+TLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGE+LKVFTKEIH FCK EADNP LKEFV PL+ LNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAK AS SLEGDDKAFYAAKLNT
Sbjct: 1 MLLSEMICATNLAWGMYPGLSHGAADALKHHGTDEQKSTYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPADGDAYAITGTKIFISAGEHDLAENIIHLVLAKLPDAPEGSKGISLFVVPKFLPDAQGNVGERNAVSCGSLEHKMGIHGNATCVMNFDGATGYLVGPPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPDKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDLVEHGQPGEERDHAETLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETLKVFTKEIHKFCKAEADNPALKEFVVPLSKLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKHASVSLEGDDKAFYAAKLNT 451
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: UPI0005B896B7 (acyl-CoA dehydrogenase C-terminal domain-containing protein n=1 Tax=Halomonas xinjiangensis TaxID=1166948 RepID=UPI0005B896B7) HSP 1 Score: 860 bits (2222), Expect = 2.200e-311 Identity = 421/498 (84.54%), Postives = 458/498 (91.97%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGDDKAFYAAKLNT 1494
EGCLLEGGEVKAPKGFK AYQQYVEGGWPSL+A+P+ GGQGLP SL M+LSEMICATNLAWGMYPGLSHGAADALRHHG+DEQKA YLTKLVEGVWTGTMCLTE HCGTDLGLIKTRAVP + +YAI+GTKIFISAG+H+LAENIVHLVLAKLP APEGSKGISLFVVPKFLPDA GN GERNGVSCGSLEHKMGIHGNATCVMNFDGA G+++G PNKGL+ MFTMMN AR+GVGIQGLGL EASFQN+L+YARDRLQMR LSG +AP+KPADPIIVHPDVRRMLLTQKAFAEGGRMLV+YTAQM+D+VEHG ERE A+TLL LLTPIVKAFLTE GFE+TNEGVQ++GGHGFI+EWGMEQLVRD+RITRLYEGTTGIQALDLLGRKVLMSQGE+LKVFTKEIH FCK EA+N LKEF+EPLA LN EWGELTMG+GMKAMQDREEVGAASVDYLMYSGYVT AYL+ARAAKQA +L + AFY AK++T
Sbjct: 64 EGCLLEGGEVKAPKGFKAAYQQYVEGGWPSLSAEPEFGGQGLPHSLGMVLSEMICATNLAWGMYPGLSHGAADALRHHGSDEQKAAYLTKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPGDEGSYAISGTKIFISAGDHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKFLPDADGNPGERNGVSCGSLEHKMGIHGNATCVMNFDGARGFMIGEPNKGLSYMFTMMNVARIGVGIQGLGLAEASFQNALAYARDRLQMRALSGAKAPDKPADPIIVHPDVRRMLLTQKAFAEGGRMLVMYTAQMVDLVEHGPDAAEREHAETLLSLLTPIVKAFLTESGFEATNEGVQVFGGHGFIQEWGMEQLVRDSRITRLYEGTTGIQALDLLGRKVLMSQGEALKVFTKEIHKFCKAEAENAALKEFIEPLAKLNGEWGELTMGIGMKAMQDREEVGAASVDYLMYSGYVTQAYLWARAAKQAHQALGSGEDAFYQAKIDT 561
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: U7NZJ1_9GAMM (Acyl-CoA dehydrogenase n=31 Tax=Halomonadaceae TaxID=28256 RepID=U7NZJ1_9GAMM) HSP 1 Score: 858 bits (2218), Expect = 9.610e-311 Identity = 428/500 (85.60%), Postives = 454/500 (90.80%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEGD--DKAFYAAKLNT 1494
EGCLLEGGEVKAPKGFKEAY Q+VEGGWPSLAADP HGGQGLP SLAM+L+EMIC+TNLAWGMYPGLSHGAADALRHHGT+EQ+ATYLTKLVEG WTGTMCLTE HCGTDLGLIKTRAVPT AY ITGTKIFISAGEH+LAENIVHLVLAKLP APEGSKGISLFVVPK+LP+ G GERNGV CGSLEHKMGIHGNATCVMNFD A G+LVGAPNKGLACMFTMMNAAR+GVGIQGLGL EASFQN+L+YARDRLQMR LSG +APEK ADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQM+DVVEHG ERERA+TLLGLLTPIVKAFLTE GFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIH FC+ E N L EFV PLA LN EWGE+TM +GMKAM DREEVGAASVDYLMYSGYVTLAYLFARAAKQA A+L + AFY AKL+T
Sbjct: 64 EGCLLEGGEVKAPKGFKEAYAQFVEGGWPSLAADPAHGGQGLPHSLAMVLNEMICSTNLAWGMYPGLSHGAADALRHHGTEEQQATYLTKLVEGTWTGTMCLTEPHCGTDLGLIKTRAVPTADGAYEITGTKIFISAGEHDLAENIVHLVLAKLPDAPEGSKGISLFVVPKYLPNEAGEPGERNGVVCGSLEHKMGIHGNATCVMNFDAAKGFLVGAPNKGLACMFTMMNAARIGVGIQGLGLTEASFQNALAYARDRLQMRALSGPKAPEKAADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMIDVVEHGTDAAERERAETLLGLLTPIVKAFLTEAGFEATNEGVQVFGGHGFIREWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHKFCQAEEGNAELAEFVRPLARLNQEWGEMTMAIGMKAMSDREEVGAASVDYLMYSGYVTLAYLFARAAKQARAALAAGTGEAAFYRAKLDT 563
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Match: A0A1B8P491_HALEL (Acyl-CoA dehydrogenase, short-chain specific n=8 Tax=Halomonas TaxID=2745 RepID=A0A1B8P491_HALEL) HSP 1 Score: 858 bits (2216), Expect = 1.940e-310 Identity = 422/500 (84.40%), Postives = 457/500 (91.40%), Query Frame = 1
Query: 1 EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLSEMICATNLAWGMYPGLSHGAADALRHHGTDEQKATYLTKLVEGVWTGTMCLTESHCGTDLGLIKTRAVPTEGDAYAITGTKIFISAGEHNLAENIVHLVLAKLPGAPEGSKGISLFVVPKFLPDAQGNVGERNGVSCGSLEHKMGIHGNATCVMNFDGATGYLVGAPNKGLACMFTMMNAARLGVGIQGLGLIEASFQNSLSYARDRLQMRGLSGKQAPEKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYTAQMLDVVEHGEPGEERERADTLLGLLTPIVKAFLTEVGFESTNEGVQIYGGHGFIKEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGESLKVFTKEIHTFCKTEADNPVLKEFVEPLATLNAEWGELTMGVGMKAMQDREEVGAASVDYLMYSGYVTLAYLFARAAKQASASLEG--DDKAFYAAKLNT 1494
EGCLLEGGEVK PKGFKEAY +YVEGGWP LAADP+ GGQGLPPSLAM+LSEMICATNLAWGMYPGLSHGAADALRHHGT+ Q+A+YL+KLVEGVWTGTMCLTE HCGTDLGLIKTRAVP + D+Y ++GTKIFISAG+H+LAENIVHLVLAKLP AP GSKGISLFVVPKFLPDA GN GERNGVSCGSLEHKMGIHGNATCVMNFD A G+LVG P+KGLACMFTMMNAAR+GVGIQGLGL EASFQN+L+YARDRLQMR LSG +A +KPADPIIVHPDVRRMLLTQKAFAEGGRMLVLY AQM+DVVE + E+ ERA+TLLGLLTPIVKAFLTEVGFE+TNEGVQ++GGHGFI+EWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGE+LK+FTKEIH FC+ E NP + EFV PLA LNAEWGELTMGVGMKAM DREEVGAASVDYLMYSGYVTLAYLFARA KQA ++L DD AFY AK+NT
Sbjct: 64 EGCLLEGGEVKTPKGFKEAYSRYVEGGWPGLAADPEQGGQGLPPSLAMVLSEMICATNLAWGMYPGLSHGAADALRHHGTEAQQASYLSKLVEGVWTGTMCLTEPHCGTDLGLIKTRAVPNDDDSYTLSGTKIFISAGDHDLAENIVHLVLAKLPDAPAGSKGISLFVVPKFLPDADGNPGERNGVSCGSLEHKMGIHGNATCVMNFDSARGFLVGKPHKGLACMFTMMNAARIGVGIQGLGLTEASFQNALAYARDRLQMRALSGAKAEDKPADPIIVHPDVRRMLLTQKAFAEGGRMLVLYAAQMVDVVERSDDTEQTERAETLLGLLTPIVKAFLTEVGFEATNEGVQVFGGHGFIQEWGMEQLVRDARITRLYEGTTGIQALDLLGRKVLMSQGETLKIFTKEIHKFCQAEEGNPDMAEFVRPLAKLNAEWGELTMGVGMKAMNDREEVGAASVDYLMYSGYVTLAYLFARAVKQAKSALAAGTDDAAFYRAKVNT 563 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12722.1670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12722.1670.1 >prot_E-siliculosus-1a_F_contig12722.1670.1 ID=prot_E-siliculosus-1a_F_contig12722.1670.1|Name=mRNA_E-siliculosus-1a_F_contig12722.1670.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=498bp EGCLLEGGEVKAPKGFKEAYQQYVEGGWPSLAADPDHGGQGLPPSLAMMLback to top mRNA from alignment at E-siliculosus-1a_F_contig12722:2..1495+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12722.1670.1 ID=mRNA_E-siliculosus-1a_F_contig12722.1670.1|Name=mRNA_E-siliculosus-1a_F_contig12722.1670.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1494bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12722:2..1495+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12722:2..1495+ >mRNA_E-siliculosus-1a_F_contig12722.1670.1 ID=mRNA_E-siliculosus-1a_F_contig12722.1670.1|Name=mRNA_E-siliculosus-1a_F_contig12722.1670.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2988bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12722:2..1495+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |