mRNA_E-siliculosus-1a_F_contig12716.1668.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: D8LIQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIQ9_ECTSI) HSP 1 Score: 130 bits (326), Expect = 6.880e-37 Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 1
Query: 7 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRELSTRSTR 195
+VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHR+ ++ + R
Sbjct: 29 EVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKR 91
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A835ZAA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA4_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.220e-18 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 7 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRELST 183
++WM EQKK+ + G + KWE K++FREYMED+NT TLPH+KYI+ KWEM E+ E S+
Sbjct: 250 EIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSS 308
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A0W8DDC6_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DDC6_PHYNI) HSP 1 Score: 78.6 bits (192), Expect = 6.480e-16 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRE 174
S Q W+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM +H++
Sbjct: 124 SFQAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQ 180
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: W2R0L3_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R0L3_PHYPN) HSP 1 Score: 78.6 bits (192), Expect = 1.330e-15 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRE 174
S Q W+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM +H++
Sbjct: 203 SFQAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQ 259
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: W4FFX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFX2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.890e-15 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRELSTRSTR 195
S VW+ + KKI+D G PKWE + F+EYMED+NT T PH+KY D+EK+EM + H++ S + R
Sbjct: 115 SFNVWLRDIKKINDFNG-PKWEAMELFKEYMEDYNTATFPHEKYYDVEKYEMRKHHKKASKDNKR 178
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A418EPQ7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EPQ7_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.630e-15 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRELSTRSTR 195
S VW+ + KKI+D G PKWE + F+EYMED+NT T PH+KY D+EK+EM + H++ S + R
Sbjct: 134 SFNVWLRDIKKINDFNG-PKWEAMELFKEYMEDYNTATFPHEKYYDVEKYEMRKHHKKASKDNKR 197
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A3F2RTC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTC5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.870e-15 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRE 174
S Q W+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM ++ ++
Sbjct: 84 SFQAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDVEKYEMRQYQKQ 140
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A8K1FMQ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMQ5_PYTOL) HSP 1 Score: 76.3 bits (186), Expect = 3.880e-15 Identity = 29/67 (43.28%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRELSTRSTRSV 201
S Q W+ + KK+ + G PKWE +YF+EYMED+NT T+PH+KY D+EK+EM ++ ++ ++ + +
Sbjct: 112 SFQAWLRDIKKVTEFNG-PKWEAMEYFKEYMEDYNTATMPHEKYYDIEKYEMGKYEKDQKKKARKHL 177
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A484EF14_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF14_BRELC) HSP 1 Score: 76.6 bits (187), Expect = 6.260e-15 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRE 174
S Q W+ KK+ + G PKWE + F+EYMEDFNTCTLPH+KY D+EK+EM ++ ++
Sbjct: 193 SFQAWLRNVKKMGEFNG-PKWEAMELFKEYMEDFNTCTLPHEKYYDIEKYEMLQYQKQ 249
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Match: A0A6A3LA60_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LA60_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.030e-15 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 SGQVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRE 174
S QVW+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM + ++
Sbjct: 214 SFQVWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDVEKYEMKRYQKQ 270 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12716.1668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12716.1668.1 >prot_E-siliculosus-1a_F_contig12716.1668.1 ID=prot_E-siliculosus-1a_F_contig12716.1668.1|Name=mRNA_E-siliculosus-1a_F_contig12716.1668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=63bp MMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFback to top mRNA from alignment at E-siliculosus-1a_F_contig12716:626..1304+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12716.1668.1 ID=mRNA_E-siliculosus-1a_F_contig12716.1668.1|Name=mRNA_E-siliculosus-1a_F_contig12716.1668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=679bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12716:626..1304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12716:626..1304+ >mRNA_E-siliculosus-1a_F_contig12716.1668.1 ID=mRNA_E-siliculosus-1a_F_contig12716.1668.1|Name=mRNA_E-siliculosus-1a_F_contig12716.1668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=378bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12716:626..1304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |