mRNA_E-siliculosus-1a_F_contig127.1659.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI) HSP 1 Score: 1284 bits (3322), Expect = 0.000e+0 Identity = 709/741 (95.68%), Postives = 715/741 (96.49%), Query Frame = 2
Query: 311 MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDIQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSSTAASPNSLGSREGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEGAXXXXXXXXXXXXXXXXXXXXXHVGWRQHHLQGDAADIESAGRGRTFSRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG*R 2533
MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXX+GGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAM DILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISL+EPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIME + GFASAGGDFDFGGGDEDGGSCFEGSNVLGSV+TILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSM VAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLT ARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLD+QEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVAD STAASPNSLGSR+GGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGG DARRGTAEVE RFLGVEDREQRGELLSEGA XXXXXXX HVGWRQHHLQGDAADIESAGRGRTF RTVCSAGQAA EGEGETAFWTSPEG RHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG R
Sbjct: 1 MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXKGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMDDILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLNEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEDIAGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVQTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMAVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTAARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGEDARRGTAEVETRFLGVEDREQRGELLSEGAAXXXXXXXDEEAGVGRGGGE-HVGWRQHHLQGDAADIESAGRGRTFPRTVCSAGQAAVEGEGETAFWTSPEGLRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEGQR 740
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.400e-61 Identity = 148/399 (37.09%), Postives = 200/399 (50.13%), Query Frame = 2
Query: 386 MFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 1582
MFAC L NTLLGVS+VG A GF AG+ +GT ++FA + GL+LLA S+ V A PSS+ VA P++ ID AVA+KCFGVATSYL+VIGDL+P A+ +L + L RH W+T + APLA R+LGALKYTATLAIG FL MV+++ +P L R + GG+ D +C +G+ +L+ L IFVF +TCHQNIF +CNE+ PT R+ VIA ++ A A+++SI+W A+ATFG V ++L Y + LT AR+CV++LV++ YPLQAHPSR I++
Sbjct: 18 MFACAAALINTLLGVSIVGSAHGFTEAGYALGTALFVIFAGFSAMGLYLLACSARKVGAF---------------------------PSSYYVVAHAAVPQYTLAIDAAVAIKCFGVATSYLIVIGDLLPDAVEGLL-KERAAPALLSRHFWITTAMVWIAPLAAQRSLGALKYTATLAIGFAFFLVSMVVAYAAVPSLH-------------------------------------------RSLCH-------------------------GGEVD--TCSGAGPAVGAPVHVLRVLSIFVFSYTCHQNIFGVCNELREPTQGRIKAVIAVAVATAAAVHLSISWSAFATFGTNVSDNILNNYAKGLPLTVARVCVALLVSTGYPLQAHPSRRSIVT 318
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.330e-53 Identity = 188/709 (26.52%), Postives = 256/709 (36.11%), Query Frame = 2
Query: 398 VTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAP--RWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDIQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSSTAASPNSLGSREGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEGAXXXXXXXXXXXXXXXXXXXXXHVGWRQHHLQGDAADIESAGRGRTFSRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHS 2518
VT L+NT+LG ++ + A G+++GT L +F + GLHLLA ++ + RE SSFR V + P +W+ +ID VA KCFGVATSYL+VIGD++P + + RH+W+ IG L+ APL F RTL L++T+ L++ V F+ M+++F V+P LDAC G DG C + + L +FVF FTCHQNIF I NE+ PTP RVD VI S+VVA +Y+++ W Y TFG V+ D+L + + +++ AR+ V++LV YPLQ HPSR CI+S I AY PS R H S+V +LGV T FL LS TIA+AV LG +L +VGATGSTTV+++LPG+ Y K+ PEPH KR LA QL GL I+P ALT IA+ +S
Sbjct: 12 VTNLANTILGAGMLAIPFAVASCGYVLGTICLFLFGAASAFGLHLLATCALKLG---------RE-------------------SSFRGVTQIALPGEKWSMMIDGVVAFKCFGVATSYLIVIGDVVPEVLYGLSS---------SRHLWIFIGALVIAPLCFLRTLDKLRFTSALSLVFVAFITSMILAFAVVPSLDAC------------------------------------------------------------------------GSNDGDDCQGDIYAARTGVSAASQLTVFVFGFTCHQNIFAIANEMKLPTPRRVDRVIVSSIVVAFFVYLAVGWAGYMTFGDNVESDVLVNFGGSPVVSAARLFVALLVCFSYPLQCHPSRACIISI-------IHSAY---------------------PSSRDHE--------------SLV-------------------------------------------------------------------------------YLGV--------------------------------------------------------------------------------------------TGTFLVLSLTIALAVTKLGTVLAIVGATGSTTVSYILPGICYFKMFPEPHLKRWLALGQLCAGLFIMPAALTLIAIENS 398
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: F0XYI5_AURAN (Uncharacterized protein AOT5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI5_AURAN) HSP 1 Score: 195 bits (496), Expect = 1.410e-50 Identity = 141/403 (34.99%), Postives = 197/403 (48.88%), Query Frame = 2
Query: 374 RTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 1582
R A+ +CV L+NT++G ++G+ F+ AG L+G +L++FA + GLHLLA ++ VSA A GG PSSFR+VA APR+A LID AVA+KCFGVATSYL+V+GD MP MA + G + +R W+ LL APL + L LK+ + L++G V+FL M++ + +EG GGG + G + S + + T +T+ IF+F +TCHQNIF + NEI RPTPAR+D V+A S+ A IY+ +A Y TFG V GD+L YP +T AR+ V+ LV +PLQ HPSR C++S
Sbjct: 27 RVASFLSCVFNLTNTIVGSGMLGLPAAFSNAGSLLGCAFLVLFASTSAFGLHLLAAAARIVSAKA-------------------GGDA---PSSFRSVATAAAPRFAVLIDGAVAVKCFGVATSYLIVVGDTMPVVMAKLGGFA------ANRSPWIVGAALLVAPLCYMPRLDGLKFASALSLGFVMFLTVMIVEY--------------------------------------------------------------YLEG-------------GGGGDVGTT----SLAVFDLDTA-KTMTIFIFGYTCHQNIFAVVNEIKRPTPARLDAVVATSIGTACGIYLLVAVCGYMTFGDKVQGDILDNYPVEPAITVARVFVAALVALSFPLQCHPSRACVMS 321
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A8J5XBN8_DIALT (Aa_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBN8_DIALT) HSP 1 Score: 197 bits (500), Expect = 7.430e-50 Identity = 231/719 (32.13%), Postives = 313/719 (43.53%), Query Frame = 2
Query: 380 ATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRT-----ILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTG-LLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDIQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSSTAASPNSLGSRE-GGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEGAXXXXXXXXXXXXXXXXXXXXXHVGWRQHHLQGDAADIESAGRGRTFSRTVCSAGQAAGEGEGETAFWTSPEGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGH 2515
A++ + V L NT++G ++G+ AR G L+G L+ LHLLARS+ T + P+SF +VA PRWAF+IDLAVA+KCFGVATSYL+V GD++P A + R HP R +WV + +AAPLA + L +KYT+ LAI VV+LA + ++ L P L AC + ARG S+ G VR L+ L IFVF FTC QN+F++ NE+ +PT AR+D V+ S+++A+A+Y+ + G Y T+G V D+L +YP +T AR ++++V YPLQAHPSR C L+ + S G G A ++ +A P A L VAD+ TAA+ +G+ GA+ + D R + A R E G ARR L + EQR + + XXXXXXXXXXXXXXXXXXXXX G F + G + TAAFLA S IA+AV+DLGV++ VVGATGST V+++LPG +Y LHP PH R A A G+ I PV+L I H
Sbjct: 17 ASLLSSVANLCNTIVGAGILGLPYALARCGLLLGVGLLLGCXXXXXLSLHLLARSAHTTG---------------------------VRPASFYSVANAAIPRWAFVIDLAVAVKCFGVATSYLIVAGDMLPLVCAHL--RLHP--AFSSRELWVVLASTVAAPLACASRLDVMKYTSALAIACVVYLAVLALATLAWPSL-AC--------------------------------------AHARGA---------------------------------------SDCRGPVRLRPDDGALRVLSIFVFGFTCQQNVFSVVNELRKPTLARIDLVVGASVLLALALYLPVGVGGYLTYGSHVAPDVLLSYPPDSPWVTAARAALAVVVVLSYPLQAHPSRRCFLTLLR-----------SARRGGGGGVRALGALGALD------IDAEAVPVATL------VADAHTAAADGDVGAPTLAGATCARD---RAAHAV-----AXXXXXXXXXXXXXXXXXXERIERPADGRCARR---------LLIGSDEQRSDAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLQPIVLSGLGFPES----------------------GGAYSAYTAAFLAGSLLIALAVDDLGVVMAVVGATGSTAVSYILPGAIYWVLHPHPHAMRFAAGAMFAAGVCITPVSLAAILTSH 564
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: W7U3M9_9STRA (Amino acid transporter, transmembrane n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3M9_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.100e-48 Identity = 134/412 (32.52%), Postives = 206/412 (50.00%), Query Frame = 2
Query: 380 ATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIP----PSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHP-----DSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW 1588
A M++CV L+N ++G ++G+ A++GWL+G L++ A L+G G LL RS+ T+ + G P P+SF + V PR L+D VA+KCFGVA SYLV++GDL+P + + R HP V +R VWVT+ FLL APL+F+ L AL++T+ +++G+V+ L +V L+ C P A+ VAA G +R +R +L+ + C + G+ ILQ LPIFV+ +T HQN +CNE+ PTP R I + +++ +Y+++A+ AY T+G + DLL ++P + L T+ R +S+LVT YPLQAHP+R C+L+ W
Sbjct: 137 AAMWSCVAVLANNMMGAGILGLPYAVAQSGWLVGGSLLLLSAVLSGHGFDLLTRSARTIHQRSL------------------SGPHVPPSRPRPASFYTLCQVCMPRGTVLVDATVAVKCFGVAISYLVIVGDLLPDVVKE--ARQHPLGGPPADVWEERWVWVTLAFLLVAPLSFASHLSALRFTSGISVGIVLVLT-LVALLYAGQVLNPCQGTSFGVTRQPTPPPAMASVAATL-GAVYPARSPHNRPRPSRPVLALAP-----------------------------PCRGPVKIAGTGPAILQVLPIFVYSYTAHQNFGLLCNELANPTPRRTRQTIMAATGLSLGVYLTLAFAAYLTYGAALQRDLLLSFPASLLSTSLRAALSVLVTFTYPLQAHPARTCLLALW 497
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A6S8D239_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D239_9STRA) HSP 1 Score: 179 bits (455), Expect = 5.240e-45 Identity = 131/417 (31.41%), Postives = 196/417 (47.00%), Query Frame = 2
Query: 374 RTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW-KAFSLDIQEAY 1621
R A++ +C+ L+NT++G ++G+ F AG ++G L++FA L+G GL+LLA S+ L R +DA SFRAVA + +PR++ LID AVA+KCFGVATSYL+V+GD +P + R+ W+ + + +PL L LK+T+ L++ V +L GM++++ G C GEN C + L ++R + +T+ IFVF FTCHQNIF++ EI RPT R+ VI S+ +A ++Y+++AW Y TFG V GD+L Y + + AR+ V+ LV YPLQ HPSR C LS + FS + E+Y
Sbjct: 22 RVASIASCILNLTNTIVGSGMLGLPKAFENAGAVMGCILLIIFASLSGFGLYLLASSAR----LCNRVDDA----------------------SFRAVAEIASPRFSALIDAAVAIKCFGVATSYLIVVGDAVPRVIGTF-----------SRNFWIILSTIFISPLCLLDKLDGLKFTSALSLLFVAYLTGMIITYRFSYG--HC--------------------------GEN--------------------------------------------------CMPSNQTLINLR-LAKTMTIFVFGFTCHQNIFSVVTEIKRPTSQRISFVIFFSLFIACSVYIAVAWSGYHTFGKKVQGDILDNYNASPAVDVARLFVAALVAFSYPLQCHPSRNCFLSLLDQCFSSNSIESY 322
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A7S2X719_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X719_9EUKA) HSP 1 Score: 174 bits (442), Expect = 1.850e-43 Identity = 131/401 (32.67%), Postives = 196/401 (48.88%), Query Frame = 2
Query: 368 APRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTI-GFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSR 1567
AP A++ +C+ L+NT+LG ++G+ FA +GW++G L FACL+G GLHLLA S+ +R + R+ ++F VA R A +ID+AVA+KCFGVATSYL+V+GDL+P A+ +G S + +R + +T+ + APL F + L AL++T+ L+IG+++F+ +++ + V P L+ I D+ G VA +ED L+ L IF+F +TCHQNIF++CNE+ T RV+TVI S+ A +YM IA YATFG + D L+ YP L+TT R+ +S+LV +PLQA P R
Sbjct: 32 APGQASLMSCIVNLANTILGAGILGLPHAFASSGWVLGVILLCFFACLSGFGLHLLATISV------ERFSENRD-------------------ATFYKVASQAFERGALVIDVAVAIKCFGVATSYLIVVGDLLPVALKS-MGLS---GLATNRQLIITVLTGAVVAPLCFLKKLDALRFTSALSIGMLLFVTIVIIIYAVEPSLNN-------QIDSDDKGDTANFVA----------------------------------------------------NED----------------TLKILTIFIFGYTCHQNIFSVCNELQNLTHTRVNTVIGTSVGSAWVLYMIIAISGYATFGDKIAADALEDYPDAPLITTVRVFISLLVVLSFPLQAFPCR 328
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A7S3YDB3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YDB3_9EUKA) HSP 1 Score: 174 bits (441), Expect = 3.540e-43 Identity = 130/401 (32.42%), Postives = 196/401 (48.88%), Query Frame = 2
Query: 368 APRTATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKRKEDAREEAXXXXXXXXRGGTRCIPPSSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTI-GFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSR 1567
AP AT+ +C+ L+NT+LG ++G+ FA +GW++G L FACL+G GLHLLA S+ +R + R+ ++F VA R A +ID+AVA+KCFGVATSYL+V+GDL+P A+ +G S + +R + +T+ ++ APL + L AL++T+ L+IG+++F+ +++ + + P L+ D+ I D+ G VA R L+ L IF+F +TCHQNIF++CNE+ T ARV+TVI S+ A +YM IA YATFG + D L+ YP L+TT R+ +S+LV +PLQ P R
Sbjct: 48 APGQATLMSCIVNLANTILGAGILGLPHAFASSGWVLGIILLCAFACLSGFGLHLLATVSV------ERFGETRD-------------------ATFYKVASQAFQRGALVIDVAVAIKCFGVATSYLIVVGDLLPVALKS-MGLS---GLATNRQLIITVLTVVVVAPLCALKKLDALRFTSALSIGMLLFVTIVIVIYALEPSLN----DQ---IDSDDKGKTTNFVAN--------------------------------------------------------------------RDTLKILTIFIFGYTCHQNIFSVCNELKDLTHARVNTVIGTSVGSAWVLYMIIAISGYATFGDKITADALEDYPDAPLITTVRVFISLLVVLSFPLQCFPCR 344
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Match: A0A7S1TS32_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS32_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.870e-43 Identity = 138/444 (31.08%), Postives = 198/444 (44.59%), Query Frame = 2
Query: 380 ATMFACVTTLSNTLLGVSVVGVAGGFARAGWLIGTFYLMVFACLAGSGLHLLARSSMTVSALAKR---KEDAREEAXXXXXXXXRGGTRC---------------------------------IPP--SSFRAVALVGAPRWAFLIDLAVALKCFGVATSYLVVIGDLMPTAMADILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACPPDETVAISLDEPGTAVEGVAAAAAGGENSSRGLQLLASSARGMLSSSQAGAGIMEGMPGFASAGGDFDFGGGDEDGGSCFEGSNVLGSVRTILQTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMVVAIAIYMSIAWGAYATFG-----VGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 1582
A++ +CV TL+NT+LG ++ ++ F+ G ++G L FAC A LHLLA S+ TV+ + + D+ G TR + P SSF VA PR++FL+D AVA+KCFGVA SYL+V+GD+MP AM ILG P L R W+ G+LL P+AF++TL ALK+T++ A+ +V+ + M + + V P LD C + +G PG E + S + L +FVFCFTCHQNIFTICNEI R T V+ VI ++ + ++ + +A Y+ +G G D ++L P T ARI ++++V YPLQAHPSR LS
Sbjct: 47 ASILSCVATLANTILGTGILELSHAFSATGLVVGVVLLCFFACCAAFTLHLLAESARTVTGVDPNTGARLDSSFSLDHTAAFVPPGSTRSQDLLYRSSGASSPVYSDQDRLTLADPSQPLPDELKPQKSSFYLVADAAVPRFSFLVDTAVAVKCFGVAVSYLIVVGDMMPDAMKFILGDDGPPFWL-SRQTWIVAGWLLVVPMAFAKTLDALKFTSSFAVAVVMGVVAMTILYAVDPDLDGCDDADD--------------------------------------------------DGCPG---------------------ETVVIPDSPKDTFAVLTLFVFCFTCHQNIFTICNEIKRNTRKNVNRVIFIAVSMCFSLCLLVAIAGYSMYGDVLLPEGKD-NILPHMPSNEATTAARIGLTLMVLFSYPLQAHPSRNSALS 417 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig127.1659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig127.1659.1 >prot_E-siliculosus-1a_F_contig127.1659.1 ID=prot_E-siliculosus-1a_F_contig127.1659.1|Name=mRNA_E-siliculosus-1a_F_contig127.1659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=740bp MATVRSASVSGGGGGVGGAAPRTATMFACVTTLSNTLLGVSVVGVAGGFAback to top mRNA from alignment at E-siliculosus-1a_F_contig127:40449..50419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig127.1659.1 ID=mRNA_E-siliculosus-1a_F_contig127.1659.1|Name=mRNA_E-siliculosus-1a_F_contig127.1659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9971bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig127:40449..50419+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig127:40449..50419+ >mRNA_E-siliculosus-1a_F_contig127.1659.1 ID=mRNA_E-siliculosus-1a_F_contig127.1659.1|Name=mRNA_E-siliculosus-1a_F_contig127.1659.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4440bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig127:40449..50419+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |