mRNA_E-siliculosus-1a_F_contig12691.1652.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12691.1652.1
Unique NamemRNA_E-siliculosus-1a_F_contig12691.1652.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A5S3PR63_9FLAO (ATP-dependent DNA helicase RecG n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PR63_9FLAO)

HSP 1 Score: 736 bits (1900), Expect = 9.340e-263
Identity = 367/387 (94.83%), Postives = 379/387 (97.93%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNGYQACLMAPTEILANQHY GIK LLDK+GISCALLTGSVK+SAR+PIHEQLE+GEL+ILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKPIKTVHR+DSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHG+MKPADKDYEMERFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQS+ ILMTSHKLS+EAKTRLETMV TNDGFEIAEVDLRLRGPG IMGTQQSGVLNLKIADIVKDNDILKTARYHAIQL K DP+LEKPENLV+RHAYAQLVKYKNIWNYIS
Sbjct:  315 AIDNGYQACLMAPTEILANQHYVGIKALLDKIGISCALLTGSVKQSARRPIHEQLESGELKILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKTVHRFDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGKMKPADKDYEMERFVRGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSFCILMTSHKLSSEAKTRLETMVRTNDGFEIAEVDLRLRGPGDIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLLKTDPTLEKPENLVIRHAYAQLVKYKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A5B7SPC5_9FLAO (ATP-dependent DNA helicase RecG n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SPC5_9FLAO)

HSP 1 Score: 709 bits (1829), Expect = 5.710e-252
Identity = 348/387 (89.92%), Postives = 374/387 (96.64%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNGYQACLMAPTEILANQHY GIKELL+  G+SCALLTGS+KKSAR+PIHEQLE+GELQILIGTHALLEDKV+Y+NLGLAI+DEQHRFGVAQRSKLWHKN+ PPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRK IKTVHRYD+NRLKVF+FIRDEIKKGRQIY+VYPLIQESEA+DYKDLMDGYESIARDFPLP+YQISIVHGQMKPADKDYEM RFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQS+ ILMT HKLSAEAKTRLETMV TNDGFEIAEVDLRLRGPG IMGTQQSGVL+LKIADI+KDNDILKTARY+A+Q+ K DP+LEKP+NL++RHAY+QLVKYKNIWNYIS
Sbjct:  315 AIDNGYQACLMAPTEILANQHYNGIKELLEGTGVSCALLTGSIKKSARRPIHEQLESGELQILIGTHALLEDKVQYQNLGLAIVDEQHRFGVAQRSKLWHKNEIPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKAIKTVHRYDANRLKVFRFIRDEIKKGRQIYIVYPLIQESEAMDYKDLMDGYESIARDFPLPEYQISIVHGQMKPADKDYEMARFVRGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSFCILMTGHKLSAEAKTRLETMVRTNDGFEIAEVDLRLRGPGDIMGTQQSGVLHLKIADIIKDNDILKTARYYAMQMLKIDPALEKPDNLLIRHAYSQLVKYKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A1G7B8B4_9FLAO (ATP-dependent DNA helicase RecG n=4 Tax=root TaxID=1 RepID=A0A1G7B8B4_9FLAO)

HSP 1 Score: 709 bits (1829), Expect = 7.530e-252
Identity = 349/387 (90.18%), Postives = 371/387 (95.87%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNG+QACLMAPTEILANQHY GIKELL    ++CALLTGSVKKSAR+PIHEQLENGELQILIGTHALLEDKV+YKNLGLAI+DEQHRFGVAQRSKLWHKN+ PPH+LVMTATPIPRTLAMSLYGDLDIS+IDELPPGRK IKTVHRYDSNRLKVF+FIRDEIKKGRQIY+VYPLIQESEA+DYKDLMDGYESI RDFPLP+YQISIVHGQMKPADKDYEMERFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSY ILMTSHKLS+EAKTRL+TMV+TNDGFEIAEVDLRLRGPG +MGTQQSGVLNLKIADIVKDNDILKTARY+AI+L K+DP LE P+NL+VRH Y QLVKYKNIWNYIS
Sbjct:  323 AIDNGFQACLMAPTEILANQHYNGIKELLQGSHVTCALLTGSVKKSARRPIHEQLENGELQILIGTHALLEDKVQYKNLGLAIVDEQHRFGVAQRSKLWHKNEIPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKAIKTVHRYDSNRLKVFRFIRDEIKKGRQIYIVYPLIQESEAMDYKDLMDGYESIVRDFPLPNYQISIVHGQMKPADKDYEMERFVKGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYCILMTSHKLSSEAKTRLQTMVATNDGFEIAEVDLRLRGPGNLMGTQQSGVLNLKIADIVKDNDILKTARYYAIKLLKEDPGLEHPDNLIVRHGYGQLVKYKNIWNYIS 709
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: G0L6W2_ZOBGA (ATP-dependent DNA helicase RecG n=15 Tax=Zobellia TaxID=112040 RepID=G0L6W2_ZOBGA)

HSP 1 Score: 708 bits (1828), Expect = 8.100e-252
Identity = 348/387 (89.92%), Postives = 367/387 (94.83%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNG+QACLMAPTEILANQHY GI ELL+  GI+CALLTGSVK++ R+PIHE+LE+GEL I+IGTHALLEDKVK+KNLGLAI+DEQHRFGVAQRSKLWHKNQ PPHIL+MTATPIPRTLAMSLYGDLD+SIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIY+VYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQS+ ILMT HKLS EAKTRL+TM  TNDGFEIAEVDL+LRGPG IMGTQQSGVLNLKIADIVKDNDILKTARYHAIQL K DP LEKPEN+ +RH YAQL KYKNIWNYIS
Sbjct:  315 AIDNGFQACLMAPTEILANQHYTGIVELLEGTGINCALLTGSVKQAHRRPIHEKLESGELNIIIGTHALLEDKVKFKNLGLAIVDEQHRFGVAQRSKLWHKNQIPPHILIMTATPIPRTLAMSLYGDLDVSIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYIVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVKGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSFCILMTGHKLSTEAKTRLQTMAHTNDGFEIAEVDLKLRGPGDIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLLKDDPGLEKPENMAIRHTYAQLAKYKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A7H9ATQ9_9FLAO (ATP-dependent DNA helicase RecG n=1 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9ATQ9_9FLAO)

HSP 1 Score: 705 bits (1819), Expect = 1.890e-250
Identity = 348/387 (89.92%), Postives = 371/387 (95.87%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNG+QACLMAPTEILANQHY GIK+LL  VG++C LLTGSVKKSARKPIHEQL++G L ILIGTHA+LEDKV++KNLGLAIIDEQHRFGVAQRSKLWHKNQ PPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKPIKTVHRYD+NRLKVFQF+RDEIKKGRQ+Y+VYPLI+ESEALDYKDLMDGYESIARDFP P +QISIVHGQMKPADKD+EMERFV GETQIMVATTVIEVGVNVPNASVMI+ESAERFGLSQLHQLRGRVGRGADQS+ ILMTSHKLS+EAKTRLETMV TNDGFEIAEVDL+LRGPG IMGTQQSG LNLKIADIVKDNDILKTARY+A+QL K DPSLEKPENLVVRHAYAQLVKYKNIWNYIS
Sbjct:  315 AIDNGFQACLMAPTEILANQHYNGIKDLLKGVGVTCELLTGSVKKSARKPIHEQLQSGGLHILIGTHAVLEDKVQFKNLGLAIIDEQHRFGVAQRSKLWHKNQIPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKTVHRYDANRLKVFQFLRDEIKKGRQVYIVYPLIKESEALDYKDLMDGYESIARDFPQPQFQISIVHGQMKPADKDHEMERFVKGETQIMVATTVIEVGVNVPNASVMIVESAERFGLSQLHQLRGRVGRGADQSFCILMTSHKLSSEAKTRLETMVRTNDGFEIAEVDLKLRGPGDIMGTQQSGTLNLKIADIVKDNDILKTARYYALQLLKDDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A7K0E3T0_9FLAO (ATP-dependent DNA helicase RecG n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A7K0E3T0_9FLAO)

HSP 1 Score: 698 bits (1802), Expect = 6.960e-248
Identity = 345/387 (89.15%), Postives = 369/387 (95.35%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDN +QACLMAPTEILANQHY GI ELL    I CALLTGSVKKSARKPIHEQLE+GELQILIGTHALLEDKV++KNLGLAI+DEQHRFGVAQRSKLWHKN+FPPH+LVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKPIKTVHR+DSNRLKVFQFIRDEIKKGRQIY+VYPLIQESEALDYKDLMDGYES+ARDFPLP+YQISIVHG+MKPADKD+EM RFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSY ILMTSHKLS EAKTRLETMV+TNDGFEIAEVDL+LRGPG +MGTQQSGVLNLKIADIVKDNDILKTARY+AIQ  ++DP+LEK EN ++RHAYAQLVK+KNIW YIS
Sbjct:  314 AIDNDFQACLMAPTEILANQHYTGISELLAGTNIKCALLTGSVKKSARKPIHEQLESGELQILIGTHALLEDKVQFKNLGLAIVDEQHRFGVAQRSKLWHKNRFPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKTVHRFDSNRLKVFQFIRDEIKKGRQIYMVYPLIQESEALDYKDLMDGYESVARDFPLPNYQISIVHGKMKPADKDFEMNRFVKGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYCILMTSHKLSNEAKTRLETMVATNDGFEIAEVDLKLRGPGDLMGTQQSGVLNLKIADIVKDNDILKTARYYAIQCLREDPTLEKRENAIIRHAYAQLVKHKNIWTYIS 700
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A3B0TAJ2_9ZZZZ (ATP-dependent DNA helicase RecG n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0TAJ2_9ZZZZ)

HSP 1 Score: 698 bits (1801), Expect = 1.020e-247
Identity = 341/387 (88.11%), Postives = 370/387 (95.61%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            A+DNGYQACLMAPTEILANQHY GI E+L+ +GI+CALLTGSVKKS RK IHEQLENGEL ILIGTHALLEDKV+YKNLGLAI+DEQHRFGVAQRSKLWHKN++PPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKPIKTVHR+DSNRLKVF+F+R+EIKKGRQ+Y+VYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHG+MK ADKDYEM RFV GET IMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGR+GRGA+QSYNILMTSHKLSAEAKTRL TMV TNDGFEIAE+DLRLRGPG +MGTQQSGVLNLKIADIV+D++ILKTAR +AIQL K DP L+KP+NLV+RHAYAQLVK+KNIWNYIS
Sbjct:  315 AVDNGYQACLMAPTEILANQHYNGITEILEGLGINCALLTGSVKKSVRKIIHEQLENGELHILIGTHALLEDKVQYKNLGLAIVDEQHRFGVAQRSKLWHKNEYPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKTVHRFDSNRLKVFRFVREEIKKGRQVYIVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGKMKSADKDYEMNRFVKGETHIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRIGRGAEQSYNILMTSHKLSAEAKTRLRTMVQTNDGFEIAEIDLRLRGPGDLMGTQQSGVLNLKIADIVRDHEILKTARRYAIQLLKNDPLLQKPDNLVIRHAYAQLVKFKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A4ASB5_MARSH (ATP-dependent DNA helicase RecG n=4 Tax=Maribacter TaxID=252356 RepID=A4ASB5_MARSH)

HSP 1 Score: 695 bits (1793), Expect = 1.680e-246
Identity = 346/387 (89.41%), Postives = 369/387 (95.35%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNGYQACLMAPTEILANQH+ GIKE L  +G++ ALLTGS+KKSAR  IHEQLENGEL ILIGTHALLEDKVKYKNLGLAI+DEQHRFGVAQRSKLWHKN+ PPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRK IKTVHRYDSNRLKVF FI+DEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHG+MKPADKDYEMERFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSY ILMTS KLS+EAKTRLETMV TNDGFEIAEVDL+LRGPG IMGTQQSGVLNLKIADIVKDNDILKTAR++A+++ K+DPSLEK E+LV+RH+YAQL+K+KNIWNYIS
Sbjct:  315 AIDNGYQACLMAPTEILANQHFNGIKEQLQDIGVNIALLTGSIKKSARTIIHEQLENGELHILIGTHALLEDKVKYKNLGLAIVDEQHRFGVAQRSKLWHKNEVPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKAIKTVHRYDSNRLKVFGFIKDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGKMKPADKDYEMERFVKGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYCILMTSFKLSSEAKTRLETMVRTNDGFEIAEVDLKLRGPGDIMGTQQSGVLNLKIADIVKDNDILKTARWYAMKILKEDPSLEKQEHLVIRHSYAQLIKHKNIWNYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A1B7ZCW7_9FLAO (ATP-dependent DNA helicase RecG n=27 Tax=root TaxID=1 RepID=A0A1B7ZCW7_9FLAO)

HSP 1 Score: 694 bits (1792), Expect = 2.380e-246
Identity = 343/387 (88.63%), Postives = 369/387 (95.35%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNG+QACLMAPTEILANQH+ GI ELL+   I+CALLTGSVKKSARKPIHEQLE+GEL ILIGTHALLEDKVKYKNLG+AIIDEQHRFGVAQRSKLWHKN+FPPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKPIKTVHRYD+NRLKVF+FIRDEI+KGRQIYVVYPLIQESEA+DYKDLMDGYESIARDFP P YQISIVHGQMKPADK++EM RFV GET IMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQS+ ILMTSHKLSAEAKTRLETMV TNDGFEIAEVDL+LRGPG IMGTQQSG+L+LKIADIVKDNDILKTAR++A++L K+DPSL KPENL++RH YAQLVK+KNIW YIS
Sbjct:  315 AIDNGFQACLMAPTEILANQHFQGISELLEGTEITCALLTGSVKKSARKPIHEQLESGELNILIGTHALLEDKVKYKNLGMAIIDEQHRFGVAQRSKLWHKNEFPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIKTVHRYDTNRLKVFRFIRDEIEKGRQIYVVYPLIQESEAMDYKDLMDGYESIARDFPQPKYQISIVHGQMKPADKEFEMNRFVRGETHIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSFCILMTSHKLSAEAKTRLETMVVTNDGFEIAEVDLKLRGPGDIMGTQQSGLLSLKIADIVKDNDILKTARFYALELLKEDPSLSKPENLIIRHMYAQLVKHKNIWTYIS 701
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BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Match: A0A2G5LCD0_9FLAO (ATP-dependent DNA helicase RecG n=5 Tax=Maribacter TaxID=252356 RepID=A0A2G5LCD0_9FLAO)

HSP 1 Score: 694 bits (1790), Expect = 4.780e-246
Identity = 343/387 (88.63%), Postives = 367/387 (94.83%), Query Frame = 1 
Query:    1 AIDNGYQACLMAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGELQILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILVMTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFIRDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVHGQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAEVDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPSLEKPENLVVRHAYAQLVKYKNIWNYIS 1161
            AIDNG+QACL+APTEILANQHY GIKELL   G++C LLTGSVKKS RKPIHEQLENGEL ILIGTHA+LEDKV +KNLGLAIIDEQHRFGVAQRSKLWHKNQ PPHILVMTATPIPRTLAMSLYGDLDIS+IDELPPGRKP+KTVHRYDSNRLKVFQFIRDEI+KGRQ+YVVYPLIQESEALDYKDLMDGYESI RDFP P+YQISIVHGQMKP DKDYEMERFV GETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQS+ ILMTS+KLS+EAKTRLETMV TNDGFEIAEVDL+LRGPG IMGTQQSG+LNLKIADIVKDN ILK+ARY+A+QL K DPSLEKPE+LV+RH YA+LV++KNIWNYIS
Sbjct:  315 AIDNGFQACLVAPTEILANQHYNGIKELLAGTGVNCELLTGSVKKSVRKPIHEQLENGELDILIGTHAVLEDKVIFKNLGLAIIDEQHRFGVAQRSKLWHKNQIPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPVKTVHRYDSNRLKVFQFIRDEIRKGRQVYVVYPLIQESEALDYKDLMDGYESIVRDFPQPEYQISIVHGQMKPEDKDYEMERFVKGETQIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGADQSFCILMTSYKLSSEAKTRLETMVQTNDGFEIAEVDLKLRGPGDIMGTQQSGMLNLKIADIVKDNAILKSARYYAMQLLKDDPSLEKPEHLVIRHFYAELVRFKNIWNYIS 701
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12691.1652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PR63_9FLAO9.340e-26394.83ATP-dependent DNA helicase RecG n=1 Tax=Maribacter... [more]
A0A5B7SPC5_9FLAO5.710e-25289.92ATP-dependent DNA helicase RecG n=1 Tax=Aggregatim... [more]
A0A1G7B8B4_9FLAO7.530e-25290.18ATP-dependent DNA helicase RecG n=4 Tax=root TaxID... [more]
G0L6W2_ZOBGA8.100e-25289.92ATP-dependent DNA helicase RecG n=15 Tax=Zobellia ... [more]
A0A7H9ATQ9_9FLAO1.890e-25089.92ATP-dependent DNA helicase RecG n=1 Tax=Costertoni... [more]
A0A7K0E3T0_9FLAO6.960e-24889.15ATP-dependent DNA helicase RecG n=2 Tax=Flavobacte... [more]
A0A3B0TAJ2_9ZZZZ1.020e-24788.11ATP-dependent DNA helicase RecG n=1 Tax=hydrotherm... [more]
A4ASB5_MARSH1.680e-24689.41ATP-dependent DNA helicase RecG n=4 Tax=Maribacter... [more]
A0A1B7ZCW7_9FLAO2.380e-24688.63ATP-dependent DNA helicase RecG n=27 Tax=root TaxI... [more]
A0A2G5LCD0_9FLAO4.780e-24688.63ATP-dependent DNA helicase RecG n=5 Tax=Maribacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12691contigE-siliculosus-1a_F_contig12691:2..1165 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1134
Model size1164
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.L
EC3.6.4.12
EggNOG OGs1HX1Z@117743,4NDZV@976,COG1200@1,COG1200@2
EggNOG free text desc.Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOsGO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494
KEGG Pathwayko03440,map03440
KEGG koko:K03655
Preferred namerecG
Seed eggNOG ortholog143224.JQMD01000002_gene752
Seed ortholog evalue5.2e-196
Seed ortholog score690.3
Taxonomic scopeBacteria
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.5544755-UTR-E-siliculosus-1a_F_contig12691:1..311622927792.5544755-UTR-E-siliculosus-1a_F_contig12691:1..31Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12691 2..31 +
1696318681.2128382-UTR-E-siliculosus-1a_F_contig12691:1..311696318681.2128382-UTR-E-siliculosus-1a_F_contig12691:1..31Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig12691 2..31 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927792.5848534-CDS-E-siliculosus-1a_F_contig12691:31..11651622927792.5848534-CDS-E-siliculosus-1a_F_contig12691:31..1165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12691 32..1165 +
1696318681.231781-CDS-E-siliculosus-1a_F_contig12691:31..11651696318681.231781-CDS-E-siliculosus-1a_F_contig12691:31..1165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12691 32..1165 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12691.1652.1prot_E-siliculosus-1a_F_contig12691.1652.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12691 32..1165 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12691.1652.1

>prot_E-siliculosus-1a_F_contig12691.1652.1 ID=prot_E-siliculosus-1a_F_contig12691.1652.1|Name=mRNA_E-siliculosus-1a_F_contig12691.1652.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=378bp
MAPTEILANQHYAGIKELLDKVGISCALLTGSVKKSARKPIHEQLENGEL
QILIGTHALLEDKVKYKNLGLAIIDEQHRFGVAQRSKLWHKNQFPPHILV
MTATPIPRTLAMSLYGDLDISIIDELPPGRKPIKTVHRYDSNRLKVFQFI
RDEIKKGRQIYVVYPLIQESEALDYKDLMDGYESIARDFPLPDYQISIVH
GQMKPADKDYEMERFVNGETQIMVATTVIEVGVNVPNASVMIIESAERFG
LSQLHQLRGRVGRGADQSYNILMTSHKLSAEAKTRLETMVSTNDGFEIAE
VDLRLRGPGYIMGTQQSGVLNLKIADIVKDNDILKTARYHAIQLFKQDPS
LEKPENLVVRHAYAQLVKYKNIWNYIS*
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mRNA from alignment at E-siliculosus-1a_F_contig12691:2..1165+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12691.1652.1 ID=mRNA_E-siliculosus-1a_F_contig12691.1652.1|Name=mRNA_E-siliculosus-1a_F_contig12691.1652.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1164bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12691:2..1165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAATTGATAACGGTTACCAGGCCTGTCTAATGGCTCCTACAGAAATTCT
TGCGAATCAGCATTATGCTGGAATTAAAGAACTGTTAGATAAAGTTGGGA
TTAGCTGTGCCCTATTAACTGGTTCTGTAAAAAAATCAGCACGCAAACCC
ATTCATGAACAGTTAGAAAACGGTGAACTTCAGATTCTAATTGGTACTCA
TGCATTACTTGAGGATAAAGTAAAATATAAGAATCTCGGACTTGCCATTA
TTGATGAACAACATCGTTTCGGAGTAGCCCAGCGTTCAAAACTTTGGCAT
AAAAATCAGTTTCCGCCCCATATTTTAGTCATGACTGCGACACCGATTCC
TCGAACCTTGGCTATGAGCCTTTATGGGGATTTAGATATTTCGATTATTG
ATGAACTACCTCCGGGAAGAAAACCGATCAAGACCGTTCACCGTTATGAC
TCGAATCGCTTGAAAGTCTTTCAATTCATTCGTGATGAAATTAAAAAAGG
ACGACAAATCTATGTCGTCTATCCACTAATTCAAGAATCTGAAGCTTTAG
ATTATAAAGACTTGATGGATGGCTATGAAAGTATCGCCCGCGACTTTCCC
CTACCCGATTATCAGATTTCCATTGTCCACGGACAAATGAAACCCGCCGA
TAAAGATTACGAAATGGAACGTTTTGTAAACGGGGAAACACAAATCATGG
TAGCCACTACGGTAATCGAAGTTGGCGTTAACGTTCCTAATGCATCTGTT
ATGATTATTGAAAGCGCAGAACGCTTTGGTTTATCGCAATTACATCAATT
ACGGGGTCGTGTCGGACGAGGTGCCGATCAGAGTTATAATATTCTAATGA
CTAGCCATAAATTATCGGCAGAAGCAAAGACACGTTTAGAAACTATGGTA
AGCACTAACGACGGATTTGAAATTGCCGAAGTTGATCTGAGACTCCGTGG
TCCTGGCTATATCATGGGAACCCAACAAAGTGGCGTTTTAAATCTGAAAA
TTGCCGATATCGTTAAAGACAACGATATATTAAAAACGGCTCGGTACCAT
GCGATTCAACTTTTTAAACAAGACCCATCGCTTGAAAAGCCAGAAAATTT
AGTGGTTCGCCATGCTTATGCACAGCTAGTCAAATACAAGAATATTTGGA
ATTATATCAGCTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12691:2..1165+

>mRNA_E-siliculosus-1a_F_contig12691.1652.1 ID=mRNA_E-siliculosus-1a_F_contig12691.1652.1|Name=mRNA_E-siliculosus-1a_F_contig12691.1652.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2268bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12691:2..1165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTCCTACAGAAATTCTTGCGAATCAGCATTATGCTGGAATTAAAGA
ACTGTTAGATAAAGTTGGGATTAGCTGTGCCCTATTAACTGGTTCTGTAA
AAAAATCAGCACGCAAACCCATTCATGAACAGTTAGAAAACGGTGAACTT
CAGATTCTAATTGGTACTCATGCATTACTTGAGGATAAAGTAAAATATAA
GAATCTCGGACTTGCCATTATTGATGAACAACATCGTTTCGGAGTAGCCC
AGCGTTCAAAACTTTGGCATAAAAATCAGTTTCCGCCCCATATTTTAGTC
ATGACTGCGACACCGATTCCTCGAACCTTGGCTATGAGCCTTTATGGGGA
TTTAGATATTTCGATTATTGATGAACTACCTCCGGGAAGAAAACCGATCA
AGACCGTTCACCGTTATGACTCGAATCGCTTGAAAGTCTTTCAATTCATT
CGTGATGAAATTAAAAAAGGACGACAAATCTATGTCGTCTATCCACTAAT
TCAAGAATCTGAAGCTTTAGATTATAAAGACTTGATGGATGGCTATGAAA
GTATCGCCCGCGACTTTCCCCTACCCGATTATCAGATTTCCATTGTCCAC
GGACAAATGAAACCCGCCGATAAAGATTACGAAATGGAACGTTTTGTAAA
CGGGGAAACACAAATCATGGTAGCCACTACGGTAATCGAAGTTGGCGTTA
ACGTTCCTAATGCATCTGTTATGATTATTGAAAGCGCAGAACGCTTTGGT
TTATCGCAATTACATCAATTACGGGGTCGTGTCGGACGAGGTGCCGATCA
GAGTTATAATATTCTAATGACTAGCCATAAATTATCGGCAGAAGCAAAGA
CACGTTTAGAAACTATGGTAAGCACTAACGACGGATTTGAAATTGCCGAA
GTTGATCTGAGACTCCGTGGTCCTGGCTATATCATGGGAACCCAACAAAG
TGGCGTTTTAAATCTGAAAATTGCCGATATCGTTAAAGACAACGATATAT
TAAAAACGGCTCGGTACCATGCGATTCAACTTTTTAAACAAGACCCATCG
CTTGAAAAGCCAGAAAATTTAGTGGTTCGCCATGCTTATGCACAGCTAGT
CAAATACAAGAATATTTGGAATTATATCAGCTAGATGGCTCCTACAGAAA
TTCTTGCGAATCAGCATTATGCTGGAATTAAAGAACTGTTAGATAAAGTT
GGGATTAGCTGTGCCCTATTAACTGGTTCTGTAAAAAAATCAGCACGCAA
ACCCATTCATGAACAGTTAGAAAACGGTGAACTTCAGATTCTAATTGGTA
CTCATGCATTACTTGAGGATAAAGTAAAATATAAGAATCTCGGACTTGCC
ATTATTGATGAACAACATCGTTTCGGAGTAGCCCAGCGTTCAAAACTTTG
GCATAAAAATCAGTTTCCGCCCCATATTTTAGTCATGACTGCGACACCGA
TTCCTCGAACCTTGGCTATGAGCCTTTATGGGGATTTAGATATTTCGATT
ATTGATGAACTACCTCCGGGAAGAAAACCGATCAAGACCGTTCACCGTTA
TGACTCGAATCGCTTGAAAGTCTTTCAATTCATTCGTGATGAAATTAAAA
AAGGACGACAAATCTATGTCGTCTATCCACTAATTCAAGAATCTGAAGCT
TTAGATTATAAAGACTTGATGGATGGCTATGAAAGTATCGCCCGCGACTT
TCCCCTACCCGATTATCAGATTTCCATTGTCCACGGACAAATGAAACCCG
CCGATAAAGATTACGAAATGGAACGTTTTGTAAACGGGGAAACACAAATC
ATGGTAGCCACTACGGTAATCGAAGTTGGCGTTAACGTTCCTAATGCATC
TGTTATGATTATTGAAAGCGCAGAACGCTTTGGTTTATCGCAATTACATC
AATTACGGGGTCGTGTCGGACGAGGTGCCGATCAGAGTTATAATATTCTA
ATGACTAGCCATAAATTATCGGCAGAAGCAAAGACACGTTTAGAAACTAT
GGTAAGCACTAACGACGGATTTGAAATTGCCGAAGTTGATCTGAGACTCC
GTGGTCCTGGCTATATCATGGGAACCCAACAAAGTGGCGTTTTAAATCTG
AAAATTGCCGATATCGTTAAAGACAACGATATATTAAAAACGGCTCGGTA
CCATGCGATTCAACTTTTTAAACAAGACCCATCGCTTGAAAAGCCAGAAA
ATTTAGTGGTTCGCCATGCTTATGCACAGCTAGTCAAATACAAGAATATT
TGGAATTATATCAGCTAG
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