mRNA_E-siliculosus-1a_F_contig1268.1647.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1268.1647.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1268.1647.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: D8LLF6_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF6_ECTSI)

HSP 1 Score: 587 bits (1513), Expect = 2.330e-206
Identity = 297/309 (96.12%), Postives = 298/309 (96.44%), Query Frame = 1

Query:    1 RCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAKEALARLGASERNFFVRGLLRLLYFVRGVPEALKVNAQLLAMEVQERLLERRLQQQRR 927
            RCAAMFEGRSDICVPPVV EQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVK+YCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLR        HIDRTLGAPINTFVIAAKTCISVLREEDAK ALARLGASERNF VRGLLRLLYFVRGVPEALKVNAQLLAMEVQERLLERRLQQQRR
Sbjct:  333 RCAAMFEGRSDICVPPVVREQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKKYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLR--------HIDRTLGAPINTFVIAAKTCISVLREEDAKGALARLGASERNFVVRGLLRLLYFVRGVPEALKVNAQLLAMEVQERLLERRLQQQRR 633

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: W7TCN3_9STRA (Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCN3_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.390e-69
Identity = 127/255 (49.80%), Postives = 166/255 (65.10%), Query Frame = 1

Query:    1 RCAAMFEG-RSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGR-PQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAKE 759
            R  A F+  R+D+ VP +V  QT  RVLTM FE G+ ATDV  +R  G+ L +VA LIS  FCEQ+F  G  HCDPH ANVL+R      +G  R P LVLLDHGLY+EL ++ R+D+  LWKA+V KD+PGVK YCQ+LN+G MY LLAAIL  RSWD I  T+  +  L T   + +K ++R Y Q+Y  EI  +L+ V R+MLLL K NDCLR        HIDR LGAP+++ ++ A+  +  L  E+ K+
Sbjct:  501 RADAFFQRHRTDVVVPEIVWAQTRPRVLTMAFEEGVCATDVPALRERGLPLDKVAHLISSVFCEQVFSSGFAHCDPHPANVLIRG---GHKGDPRAPVLVLLDHGLYKELPDQLRLDYASLWKALVLKDLPGVKYYCQKLNAGRMYSLLAAILTSRSWDDI--TSPDLGSLQTPSSKEDKTLIRSYAQRYYFEIVDILNSVPREMLLLLKMNDCLR--------HIDRALGAPVDSSLVTAEESVKALLREELKK 742

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A7S1DP73_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DP73_HEMAN)

HSP 1 Score: 223 bits (568), Expect = 1.080e-66
Identity = 115/240 (47.92%), Postives = 152/240 (63.33%), Query Frame = 1

Query:    1 RCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAK 720
            RC  MF+    + +P      + +RVLTM FE GL + D EG+  +GVS  R A+LISE FC QMF H  VHCDPH +N+LVR HP    G G PQLVLLDHGLYREL   F +++ RLWKA+VF D+  ++  CQ   +GDMY LLA+++  R W+ I D  + + G    + E +K  ++ YV +YA +I  +++KV RQMLLL K NDCLR        H+DR LG+P  TFVI A+
Sbjct:  169 RCREMFQEDDRVVIPKFYPNLSTKRVLTMTFEEGLSSADAEGITGLGVSPERTAALISEVFCSQMFLHRFVHCDPHPSNLLVRRHPS---GGGSPQLVLLDHGLYRELDPDFVLEYSRLWKALVFGDVQAIRRQCQVFGAGDMYPLLASMIMARPWNDILDRQA-LTGQ--SEGEEDKDKIKLYVVKYAADIGAMMNKVPRQMLLLLKANDCLR--------HVDRRLGSPTTTFVITAR 394

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A383WHM2_TETOB (ABC1 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHM2_TETOB)

HSP 1 Score: 218 bits (554), Expect = 1.390e-62
Identity = 111/241 (46.06%), Postives = 155/241 (64.32%), Query Frame = 1

Query:   40 VPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAKEA 762
            VP V  + T+ RVLTM+F  G++ TD  G+  +G++   +A L+S+ F E +F HG VHCDPH AN+LVR  P     +G+PQLVLLDHGLYR++ + FR ++  LW+A++F D  G+K++ + +N+GD Y L AA+L  R WD I D    ++ L     + EK M+RGY   YA +I  LL ++ R +LLL KTNDCLR         +D +LGAPINTFVI AKTC   L E D +++
Sbjct:  293 VPAVYPQLTSARVLTMEFIEGVQVTDRPGLARLGIAPGALAQLVSQTFNEMIFIHGDVHCDPHAANLLVRRGP-----AGQPQLVLLDHGLYRQIDDGFRREYAALWRALIFSDKAGIKQHAESMNAGDAYPLFAAMLTMRPWDQIVDFDPQLEHLSLTSNKQEKDMLRGYAAIYAKQIGDLLLRMPRPLLLLLKTNDCLR--------SVDLSLGAPINTFVITAKTCNRALAEMDMQQS 520

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A7J7QKT6_9CHLO (ABC1 family-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QKT6_9CHLO)

HSP 1 Score: 214 bits (544), Expect = 2.260e-61
Identity = 108/241 (44.81%), Postives = 154/241 (63.90%), Query Frame = 1

Query:   40 VPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAKEA 762
            VP V  + ++ RVLTM+F  G++ TD  G+  +G++   +A L+S+ F E +F HG VHCDPH AN+LVR  P     +G+ QLVLLDHGLYR++ + FR ++  LW+A++F D  G+K++ + +N+GD Y L AA+L  R WD I D    ++ L     + EK M+RGY   YA +I  LL ++ R +LLL KTNDCLR         +D +LGAP+NTFVI AKTC   L E D +++
Sbjct:  263 VPHVHPQLSSARVLTMEFIEGVQVTDRPGLSQLGIAPGALAQLVSQTFNEMIFIHGDVHCDPHAANLLVRKGP-----AGQTQLVLLDHGLYRQIDDSFRREYAALWRALIFSDKAGIKQHAESMNAGDAYPLFAAMLTMRPWDQIVDFDPQLEHLSLTSNKQEKDMLRGYASVYAKQIGDLLLRMPRPLLLLLKTNDCLR--------SVDLSLGAPVNTFVITAKTCSRALAEMDMQQS 490

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A8J2S8Y1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8Y1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.370e-60
Identity = 114/253 (45.06%), Postives = 151/253 (59.68%), Query Frame = 1

Query:    1 RCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMR-AMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAK 756
            RCA  FE   D+ VP V  E T+ RVLTM +EPG+  T  + +R  +G+    VA+L+S AF    F  G VHCDPH ANVLVR  P     +GRPQLVLLDHGLYREL ++FR++  RLW+A+   D+PG++E  + L  GD+Y L AA+L  R WD +      +D L       +  M+R Y Q+YA EI ++L +V RQ+LLL K +DCLR        H+DR+LG   NT V+ A  C   L   D +
Sbjct:  300 RCAKTFERWPDVVVPEVFDEATSARVLTMSWEPGVNGTRKDEIRDELGLDPTAVAALVSTAFAFLTFHDGHVHCDPHAANVLVRASP-----AGRPQLVLLDHGLYRELDDEFRLEWARLWRALALADVPGIRESAEALGVGDLYPLFAAMLTQRPWDDV--VNPDLDSLRRTGA-ADDAMLREYAQRYAQEITVVLDRVPRQLLLLLKMSDCLR--------HLDRSLGGTTNTDVVTAHACADALYAADGR 536

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A388MF14_CHABU (ABC1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MF14_CHABU)

HSP 1 Score: 209 bits (531), Expect = 1.980e-59
Identity = 113/257 (43.97%), Postives = 158/257 (61.48%), Query Frame = 1

Query:    1 RCAAMFEGRSD-----ICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARR-----GSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSG-DMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVL 738
            RC   FE +S      + +P V+S  +  RVLTM+F  G+  TD + ++ MG++   VA L+S++F E +F HG VHCDPHGANVLVR  P+A R        RPQ+VLLDHGLYR L +  R+++  LWKA+VF D   ++E+ + L +G D+Y L A IL  R W+ + DT+  +D L   D E +K  ++ Y  QYA E++ LL+++ R +LLL KTNDCLR          D  LGAP+NTF+I A+ C   L
Sbjct:  290 RCRKNFEHQSPYLAPLVAIPTVLSGLSTSRVLTMEFMEGVPITDKDAIKKMGLNPADVARLLSKSFAEMIFHHGFVHCDPHGANVLVRRLPQAGRFWFPKWFARPQIVLLDHGLYRILDDSLRLNYASLWKALVFSDENAIREHSKALGAGEDLYRLFAGILTMRPWNHVIDTS--IDHLKIPDTEEDKAQIQFYAAQYAMEVSTLLARLPRVLLLLLKTNDCLRA--------TDNALGAPVNTFIIIARECTRAL 536

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A7S1FRT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRT5_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.040e-58
Identity = 108/240 (45.00%), Postives = 147/240 (61.25%), Query Frame = 1

Query:   31 DICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTT---SGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLR 741
            D  VP +  E TA RVL M +EPG ++TD+E ++  G+    ++ +IS  F +Q+F  G VHCDPH ANVL+RPHP  +   G+PQ+VL+DHGLY+E+ ++FR+ + RLW+AMV  DI  ++  C+ +   DMY LLAA+L  R +D I D     S  D + T   E +  M+RGY ++YA EIA +L  V R MLLLFKTNDCLR        HID  LG P +    A K     +R
Sbjct:  242 DCIVPKIYWEYTAPRVLCMSYEPGFKSTDMEAIQKAGLRPRDISKIISSVFNKQIFHSGFVHCDPHPANVLLRPHPHKK---GKPQMVLVDHGLYKEIDDRFRLAYARLWQAMVLADIDAIRSICETMGVRDMYPLLAAMLTARPFDEILDKAGRRSPSDSV-TVSAEGDAAMLRGYAEKYAVEIADMLDAVPRPMLLLFKTNDCLR--------HIDTALGRPRDAAGAAGKEAAGAVR 469

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A7S1YTP5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTP5_TRICV)

HSP 1 Score: 197 bits (502), Expect = 1.590e-56
Identity = 106/242 (43.80%), Postives = 147/242 (60.74%), Query Frame = 1

Query:   34 ICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAI--EDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDA 753
            + VP V  ++T+ERVLTM FE G +ATD+  +R  G+    V+ L+S AF  Q+FR G VHCDPH ANVL+R + E     G PQ+VL+DHGLYR + ++FRV + RLWK+++  D+ G+K+ C+ L   +MY LLAA+L  R +D I     T  +     K  E +K M++GY Q++  +I  +L  V RQMLLLFK NDCLR        HI+  LGA     ++ A  C +    EDA
Sbjct:  200 VVVPKVHWDETSERVLTMDFEEGFKATDLNSLRKSGLDTGDVSRLVSTAFHSQVFRSGFVHCDPHPANVLLRANAE----DGTPQMVLVDHGLYRRIDDEFRVRYARLWKSLLVADVGGIKDSCRDLGVDEMYPLLAAMLTSRPFDEIIERSKTGALKTDSNKTSEADKAMIKGYAQRFITDIIKMLDAVPRQMLLLFKMNDCLR--------HIETALGASHGDGLMVAGRCAARTVYEDA 429

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Match: A0A1Z5K6Q9_FISSO (AarF domain-containing kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6Q9_FISSO)

HSP 1 Score: 200 bits (509), Expect = 2.050e-56
Identity = 101/235 (42.98%), Postives = 146/235 (62.13%), Query Frame = 1

Query:   22 GRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRSWDAIEDTTSGMDGLHTKDIE--TEKGMVRGYVQQYAPEIAMLLSKVDRQMLLLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAK 720
            G  D+ VP +V EQT  RVLTM FE G +ATD E +  +G+   +VA+L+S AF  Q+F  G VHCDPH ANVL+R    A+   G P+LVLLDHGLYR L  +F +++ RLWKA++  DIPG++  C ++   DMY + AA++  R +D + + +    G     +    +K ++ GY Q++  +I  LL+++ R+MLLL KTNDCLR        HID  LG+P NT ++  +
Sbjct:  301 GLHDVIVPAIVWEQTTSRVLTMHFEEGCKATDTEAIAKLGIDKKKVANLLSSAFASQIFESGCVHCDPHPANVLLR----AKNLRGDPELVLLDHGLYRTLDPEFVLNYARLWKALLLADIPGIQAACAQMGLEDMYTMFAALVTARPFDEVIERSKNRWGKPRDKLNKRVDKTVMAGYAQRFLRQIMDLLARIPREMLLLLKTNDCLR--------HIDNALGSPANTLLVTGR 523

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1268.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LLF6_ECTSI	2.330e-206	96.12	ABC1 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
W7TCN3_9STRA	3.390e-69	49.80	Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 ...	[more]
A0A7S1DP73_HEMAN	1.080e-66	47.92	Hypothetical protein (Fragment) n=3 Tax=Hemiselmis...	[more]
A0A383WHM2_TETOB	1.390e-62	46.06	ABC1 domain-containing protein n=1 Tax=Tetradesmus...	[more]
A0A7J7QKT6_9CHLO	2.260e-61	44.81	ABC1 family-domain-containing protein n=1 Tax=Scen...	[more]
A0A8J2S8Y1_9STRA	1.370e-60	45.06	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]
A0A388MF14_CHABU	1.980e-59	43.97	ABC1 domain-containing protein n=1 Tax=Chara braun...	[more]
A0A7S1FRT5_9STRA	3.040e-58	45.00	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A7S1YTP5_TRICV	1.590e-56	43.80	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A1Z5K6Q9_FISSO	2.050e-56	42.98	AarF domain-containing kinase n=2 Tax=Fistulifera ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1268	contig	E-siliculosus-1a_F_contig1268:29619..34419 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	918
Model size	930
Exons	8
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko01001
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	E
EggNOG OGs	COG0661@1,KOG1235@2759
EggNOG free text desc.	regulation of tocopherol cyclase activity
GOs	GO:0003674,GO:0005215
KEGG ko	ko:K08869
Seed eggNOG ortholog	2880.D8LLF6
Seed ortholog evalue	2.7e-163
Seed ortholog score	581.3
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927791.816063-UTR-E-siliculosus-1a_F_contig1268:34407..34419	1622927791.816063-UTR-E-siliculosus-1a_F_contig1268:34407..34419	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1268 34408..34419 -
1696318680.8623486-UTR-E-siliculosus-1a_F_contig1268:34407..34419	1696318680.8623486-UTR-E-siliculosus-1a_F_contig1268:34407..34419	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1268 34408..34419 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1268.1647.1	prot_E-siliculosus-1a_F_contig1268.1647.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1268 29619..34407 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1268:29619..34419-
coding sequence from alignment at E-siliculosus-1a_F_contig1268:29619..34419-

protein sequence of mRNA_E-siliculosus-1a_F_contig1268.1647.1

>prot_E-siliculosus-1a_F_contig1268.1647.1 ID=prot_E-siliculosus-1a_F_contig1268.1647.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=306bp
MFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVA
SLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGL
YRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR
SWDAIEDTTSGMDGLHTKDIETEKGMVRGYVQQYAPEIAMLLSKVDRQML
LLFKTNDCLRRGFGVDVTHIDRTLGAPINTFVIAAKTCISVLREEDAKEA
LARLGASERNFFVRGLLRLLYFVRGVPEALKVNAQLLAMEVQERLLERRL
QQQRR*

mRNA from alignment at E-siliculosus-1a_F_contig1268:29619..34419-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1268.1647.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1647.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4801bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:29619..34419- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGTGCGCGGCGATGTTTGAAGGGCGGAGTGACATCTGCGTGCCCCCCGT
CGTGAGCGAGCAGACCGCTGAGAGGGTGCTCACCATGAAGTTCGAGCCGG
TGAGCAGCGTGAAAATGTAGAAAACACACCTCAAGAATTTTTAGCTGACC
GTACGGCGCTGATCGTTCTATCTGTGGATAGATATTGCTTCCGCGTGCGC
GACTACTGCCGCCGACGCATGTTTGCGCTGGTCGTGCTGAGACGGCCACA
GACAAGGACAGGGGCGTGGCGAAAACAAGAGGGGGTTGGGGGGGGGCATG
AGAGGAGAACCAAGTGAGAGATGTGCGCTTCGACATGGGACTCAGTGCAT
GTTGGAGGTACGACGAGAAACAAAGGGCAATGACCTCTATCTGACCGGAG
AATCACAGCGAGCGCCAAAATGTCCGACTTAAATCAGCAAAGCATTGATC
CTTTTTGGTCGACCCTCCTCCCCCCGCCGCACCGCCCGCGCGTTTGGCAC
GGTACTGCAAAACCCCGACAGGGGTTGCGAGCGACGGACGTGGAAGGCAT
GCGCGCGATGGGGGTCAGCCTTCCGAGGGTGGCATCCCTCATCAGCGAGG
CCTTCTGCGAACAGGTTAGGCCTTTTGCCGAACAATCGTCTCATCAGAAA
GTTGGGTCAGAAGGCGCGGGGGACACACACGGCAGCAAGGGAGCGTCAGA
TTTTTCACCTATTTTTCACCTCAGCCGTGGGAAAGAAGACTGGTGCTCGT
GCTCCTGCTTTTTTTTTTTGTCTCCGTGGCGGCGTTACTGTTGCCAGCGT
ACGTTTTTAGCCCCCCTTGGCACAGCAAAAACCCAAGAATAGTGCCTGGT
TGGTTCATCCTTATCCTTGTGAAACGAAGCCTGGGCCAGCGAAAACCCGG
CATACCGCTCCGTCCCGCTCCGTCCCGCTCCGTCCCGGCACTGTAGGGAT
GCGAGGTCAGTGGTCTAACGACTGCGGCACTGCAAGACTATTGAGTTCAC
CCACCCACCCTGTCCTCGCCAGATGTTTCGCCACGGTTCAGTCCACTGCG
ACCCTCACGGCGCGAACGTTCTGGTGAGACCGCACCCGGAGGCAAGGAGG
GGGTCAGGGCGCCCGCAGCTGGTGCTGCTCGATCACGGGCTGTACAGGGA
GCTGACGGAGAAGTTCAGGGTGGACCACTGCAGGCTGTGGAAGGCGATGG
TGTTCAAGGATATTCCAGGTGGGACAACGCAAAGGGGAGAGGGAGGGGGG
GGGAGGGGGGGGGGCAGGCTGTTTTTCGCTTGCCTCAGCCTCGTGGGACC
CTGTATCTGACTTTTCGTCTTCAAACGATTGGACGAAGCAATACCGAACG
CTTCTGTCCCGATGCGGTCGAGTCATTCTCCTAAAAGCCCTACGCGCGTT
GAGCGCTACGTTTATCGTAAGCGATTTTTCGCCTGTGTACTTGCTCAGCT
GAATCATGGTGCGGGGATTTTTTTTTCCTTCCATCCGGTTGTGCCGGCAG
CGCCATCGAGAGTCGACATAGCATGGTGCCGCGCAGCAGTAGTAGTCGGC
CCTTCGAAAAACTGCCCTTCTCGTGACGCTTGGTTAAACTGCCGTGCAGC
TACATACATCGGTGCCATGGTAGGTGCCTGCCACGGAAAAAAGTTGAGGA
AAGGCTAGCGACCGCAATTCAACACAATCTCCTTCTACGTACGGGACGAA
GGAAAGTATCCTTACCCCCGTTGGATTATGCGCATGTTATGTGTGTGGCA
GTACTGTAGCATCCATAAAAGAATTCGCGTGCGTCCACGTGCCAAATACG
TTTTGTTTTGTTATTGACACCGCAGGGGTGAAGGAATACTGCCAGCGGCT
CAACTCCGGCGACATGTACCACCTGCTGGCGGCTATCTTGTGCGGCAGGT
CGTGGGACGCAATCGAGGACACGTGCGTATGTGGTGGTCGGTCATCGTGC
CGAACGGACTGTTTCTTTTTTTTGCCTTGTCGTTGCCCCCCTTGAGAGTA
CCCACGGATGTTTCCGGTGTTCTTTCGTGGATGTGGACGCGAACGCTCGT
GCCCGTGCCGCCGAGGAAGCTCCCTTTGTTCTGATGTGGAGTTCTAGGGC
TGTCGGGAGGGGGGAAAAACAGGCACATCTTGTCTCGTAGCGTCCCTCTG
GATTGGATGCGGTTCGTCCGTCGTGTTTGTAGTAGTCCGTGACTGCTGCT
GCTTCTGTGTCCGCCGTTAAGATCGCGGGCGCGCTCCGCGGGCGTCTCAT
TGGCCTGTCCAGTTCCCCCCACGTGCAGACCGCCCCTGTCATCTTGCTTG
CTTGTCTGCTGGTCTGTTCGCTGCCGGCGCGCCTCTAGCCTTGAGAAACA
GCTGGGAACGTTCGCAGCAGCTTTGGGGAAGGGTGTCAGTGGACGCTTGC
TCTCGAACCTCTTCCCCCCTCTCTTGCAGTATACCACGGGGTCTCCGTTC
TCTTGTTCACGCCCGCGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCGCCCCCCCCGC
TTTTTTTGCGCCCCCCCCGCCCCCCCCCCCCCCCCCCCCATCCGCCCCGC
ACATGCATGCTCTCAGGACATCTGGGATGGACGGCCTCCACACCAAAGAC
ATCGAGACGGAGAAGGGCATGGTGCGCGGCTACGTGCAGCAGTACGCGCC
CGAGATAGCCATGCTCCTCTCCAAGGTCGACCGGCAGATGCTCCTGCTTT
TCAAGACCAACGACTGCCTCAGGCGCGGATTTGGTGTTGATGTTACGTGC
CATGTATCCCAGCGATAAGCATCGACACACGAAAGGGTTGGGGGGGCATC
AAGTAACATGTGTGTCAGTCCCACCCCCCCTTCCCGATCAAATGCGGTGC
AATCAATGCCTGCTCGGGTTCCGAAAGTTTTTTGATACAGGGTTATGCGT
TTCACCCTGCAGCATGCGCGACGACACGCACACACACTAGTTCACCATGG
GAATACCTAGCTGATCTCAAGGGCGCGCGCCCGTTGTGACCTGATTCACG
CCTTCTGTGGTACCTTTTTTTATGCTTCGCTTGGATCATAACTTCGCTCC
CGTCTGTGCCCGCCTGGTTATTGCTGTGTTTGGATTGGTGGTTTCGATGG
TTTCACGCAGGCACATTGACAGGACCCTGGGCGCGCCCATCAACACGTTC
GTCATCGCCGCCAAGACGTGCATCTCCGTACTAAGGGAAGAGGACGCCAA
GGAGGTGCGTTTATACATGCGTACATGCGCAAACGCGCCCACACAAGTGG
ATACTCTGGGCGGGGGACTGTTAATTTGACCGTATGCACGTCCCCGCTGT
AGTTTTTCGAAACACGCCCCGCCTCTACAAGCGGTATTTCGTCTGAACTC
TACGTTTCGTTGTGACTCAGGATTTCTGGCATGTTGCTACTCTTTACTAA
GAAGTAGACCGCTGGACCAGAAAATTCTAGACCGCGTAGAACACGTAATA
ACCATACCCCCGCACCCTCCCGACTGCTTCAAAGAACCTCCCTCCTATTT
TGGCCGAGGCTCGAGTCGTGTTTCCTATGCGAGGTAAAGTATCCCAACAT
CGACGATGTGGGTTGTAGTGTTGGGTTGTTATTGTGAACACGTGTCCTTA
CGGCCAAGTTCTTCCATTTCTCTTCGTTTGAGCCTAGGCCTTGCTCTTAC
TGTAAATGGCGGCGCATTCTGTATTCTTCTAGCCTACTGGCGCCGAACGC
AGGCGCTAAGCTGCAAAACCAATGAGAGAACGTCAGCCGTACGCAGCAGT
GGGGAAAGAAACGACAAAAACTCTTGCATGATTGAATTATGTAACAGTGC
CGACCGTGCAAGGTAGCCGTCGAATAATGGGGTAGTGGAAACTCTTCTCA
GCGGGACACAAGCCGATAGCACTTTCCACTCCGGGAGATCACACACTGTG
TGGGGAAGGGGGGGGGTTAGAACACGGGCTTGGAGTTGCGTTTGTGTTTG
TTAGAACACGGGCTTGGAGTTTTTTTTTTGTGTGTGTGTTTGTTGTTGTT
GCGACATGGTCGTGAATTATCTGTCTCCACCTCCCAAGCGCTTCGGTTCC
GCCCCTGCCCTCCTGACGCCGTTCTCCTCTTGCTAAAAACGAACTCCAGG
CGCTGGCTCGGCTAGGAGCGAGCGAGCGCAATTTTTTCGTCCGAGGACTC
CTGCGTCTGCTCTACTTTGTTCGGGGGGTTCCGGAAGCGCTCAAGGTACG
AGAGAATCAAACCTCGTAGGGAATACCACTCTGACCGGAAATATAGGGAC
CATTGTAGTATTGGCGCTTGTGATCCGAATGGCCCTTATGTTGGCGACCA
GAGAGTGGTATGTGTGACCATCATGATACTTAGATCTGCATTATTTCGTG
TTGTTGTGGGTTTGCCTACTGCGGGCGTCCACTCCTGCCAAACAGTTGCG
CTGCCGTAGCGCCGCAACGCCTACTTTCTGTCATGGTCCGGCGCCTCTCA
AAACCTGGCCCTGGCCTCAAGGACGCTTTCACGTGTGCATTGATTGGCCG
GGACCGATCAGCAATGAGCCGTGTGACACGCCGAAACAGCGCGGACCCTA
CCAGACGACCCTATTGCAAGAATTTTGTTCAAGGTGTGCATCATATTTTC
TTGCTCTAACTTGTTCTACTGTTGTCGTCGCTCGCAATTTTGTTTGATGT
ACTATATATTGTGATGGCGGCGGCAGGTGAACGCACAGCTACTAGCCATG
GAGGTCCAGGAGAGGCTGCTGGAGAGGCGCTTACAGCAGCAACGTCGATA
G

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1268:29619..34419-

>mRNA_E-siliculosus-1a_F_contig1268.1647.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1647.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1647.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1836bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:29619..34419- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTTGAAGGGCGGAGTGACATCTGCGTGCCCCCCGTCGTGAGCGAGCA
GACCGCTGAGAGGGTGCTCACCATGAAGTTCGAGCCGATGTTTGAAGGGC
GGAGTGACATCTGCGTGCCCCCCGTCGTGAGCGAGCAGACCGCTGAGAGG
GTGCTCACCATGAAGTTCGAGCCGGGGTTGCGAGCGACGGACGTGGAAGG
CATGCGCGCGATGGGGGTCAGCCTTCCGAGGGTGGCATCCCTCATCAGCG
AGGCCTTCTGCGAACAGGGGTTGCGAGCGACGGACGTGGAAGGCATGCGC
GCGATGGGGGTCAGCCTTCCGAGGGTGGCATCCCTCATCAGCGAGGCCTT
CTGCGAACAGATGTTTCGCCACGGTTCAGTCCACTGCGACCCTCACGGCG
CGAACGTTCTGGTGAGACCGCACCCGGAGGCAAGGAGGGGGTCAGGGCGC
CCGCAGCTGGTGCTGCTCGATCACGGGCTGTACAGGGAGCTGACGGAGAA
GTTCAGGGTGGACCACTGCAGGCTGTGGAAGGCGATGGTGTTCAAGGATA
TTCCAGATGTTTCGCCACGGTTCAGTCCACTGCGACCCTCACGGCGCGAA
CGTTCTGGTGAGACCGCACCCGGAGGCAAGGAGGGGGTCAGGGCGCCCGC
AGCTGGTGCTGCTCGATCACGGGCTGTACAGGGAGCTGACGGAGAAGTTC
AGGGTGGACCACTGCAGGCTGTGGAAGGCGATGGTGTTCAAGGATATTCC
AGGGGTGAAGGAATACTGCCAGCGGCTCAACTCCGGCGACATGTACCACC
TGCTGGCGGCTATCTTGTGCGGCAGGTCGTGGGACGCAATCGAGGACACG
GGTGAAGGAATACTGCCAGCGGCTCAACTCCGGCGACATGTACCACCTGC
TGGCGGCTATCTTGTGCGGCAGGTCGTGGGACGCAATCGAGGACACGACA
TCTGGGATGGACGGCCTCCACACCAAAGACATCGAGACGGAGAAGGGCAT
GGTGCGCGGCTACGTGCAGCAGTACGCGCCCGAGATAGCCATGCTCCTCT
CCAAGGTCGACCGGCAGATGCTCCTGCTTTTCAAGACCAACGACTGCCTC
AGGCGCGGATTTGGTGTTGATGTTACGACATCTGGGATGGACGGCCTCCA
CACCAAAGACATCGAGACGGAGAAGGGCATGGTGCGCGGCTACGTGCAGC
AGTACGCGCCCGAGATAGCCATGCTCCTCTCCAAGGTCGACCGGCAGATG
CTCCTGCTTTTCAAGACCAACGACTGCCTCAGGCGCGGATTTGGTGTTGA
TGTTACGCACATTGACAGGACCCTGGGCGCGCCCATCAACACGTTCGTCA
TCGCCGCCAAGACGTGCATCTCCGTACTAAGGGAAGAGGACGCCAAGGAG
GCACATTGACAGGACCCTGGGCGCGCCCATCAACACGTTCGTCATCGCCG
CCAAGACGTGCATCTCCGTACTAAGGGAAGAGGACGCCAAGGAGGCGCTG
GCTCGGCTAGGAGCGAGCGAGCGCAATTTTTTCGTCCGAGGACTCCTGCG
TCTGCTCTACTTTGTTCGGGGGGTTCCGGAAGCGCTCAAGGCGCTGGCTC
GGCTAGGAGCGAGCGAGCGCAATTTTTTCGTCCGAGGACTCCTGCGTCTG
CTCTACTTTGTTCGGGGGGTTCCGGAAGCGCTCAAGGTGAACGCACAGCT
ACTAGCCATGGAGGTCCAGGAGAGGCTGCTGGAGAGGCGCTTACAGCAGC
AACGTCGATAGGTGAACGCACAGCTACTAGCCATGGAGGTCCAGGAGAGG
CTGCTGGAGAGGCGCTTACAGCAGCAACGTCGATAG