mRNA_E-siliculosus-1a_F_contig1268.1644.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: D8LLF2_ECTSI (Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF2_ECTSI) HSP 1 Score: 1237 bits (3201), Expect = 0.000e+0 Identity = 727/748 (97.19%), Postives = 728/748 (97.33%), Query Frame = 2
Query: 47 MAARRRTTLAAVSSASLNSRGSMGTTXXXXXXXXXXXXXXXRFSIXXXXXXXXXXXXXXXXXXXRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQASHSVKRKEEAYNKSKYALDKQVAGGKSETEHEERRLESQNGSAERLDRVAAENKASSDVLRVQIEALKERKEMEKRQSENVLQSTLETALDYKEREEKCLAGLKDRYRQHHGAILHGQTAFDLVLSEGGILLDHEQPAAEGEEGLGGAEGHLRLQEEEGETQEDGEEDTLHGRIALWPSVPSSS 2290
MAARRRTTLAAVSSASLNSRGSMGTT XX RFSIXXXXXXXXXXXXXXXXXXXRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAA+GAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGET YAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ VKRKEEAYNKSKYALDKQVAGGKSETEHEERRLESQNGSAERLDRVAAENKASSDVLRVQIEALKERKEMEKRQSENVLQSTLETALDYKEREEKCLAGLKDRYRQHHGAILHGQTAFDLVLSEGGILLDHEQPA EGEEGLGGAEGHLRLQEE GETQEDGEEDTLHGRIALWPSVPSSS
Sbjct: 1 MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLAXXKQPSSRFSIXXXXXXXXXXXXXXXXXXXRTSMGARPSMGTSXXXXXXXXXXXXXXXXXXXRPSMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQ----VKRKEEAYNKSKYALDKQVAGGKSETEHEERRLESQNGSAERLDRVAAENKASSDVLRVQIEALKERKEMEKRQSENVLQSTLETALDYKEREEKCLAGLKDRYRQHHGAILHGQTAFDLVLSEGGILLDHEQPAEEGEEGLGGAEGHLRLQEE-GETQEDGEEDTLHGRIALWPSVPSSS 743
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A836CEN5_9STRA (Kinetochore protein NDC80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN5_9STRA) HSP 1 Score: 297 bits (761), Expect = 8.960e-87 Identity = 198/467 (42.40%), Postives = 274/467 (58.67%), Query Frame = 2
Query: 335 RPSMSTAGDRKS-VGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPS--GRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEY--TEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSAS-----------DMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAE 1687
R S++ G RKS VG++R+++FGT ++D RP+ DK N S+ L YL D+GYDQPI++K LTRPSGRDFNNI GFLFRQ DP ++PS RFED+V+PFLK + YPFT+SKS L A+GAPQ+WPK + AISWIV+ L+YD+ +A E EQ+ R E + D F YL +AY CFL GD+ + A+ + T + GAE R A AL + + +L + +LP L + + SD EK L+ +++ HR L EKV+KR EE R K L + E A+LRE++A QE SA D++ ER RLRD + A E K A+K GW A++++S EAL+ +H +A+AL LVP A+NA Y + I+ L+ E+ VL+NDVRG IRPAL ++ A+VRR R+ L LL ++ +E
Sbjct: 32 RHSLAAPGGRKSSVGMKRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG---------EVDIADHA-----FFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNA--ALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAA---AKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 478
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: W7TL40_9STRA (Kinetochore protein NDC80 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL40_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.070e-56 Identity = 161/486 (33.13%), Postives = 253/486 (52.06%), Query Frame = 2
Query: 362 RKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDD-QGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLD---QEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQASHSVKRKEEAYNKSKYALDKQVA 1807
+ S G+R++T++G+ R D RP DK ++ AS+ L YLTDH YDQP ++K L RP+ +DF I FLFRQ+D N+R +G+ ED+V+ F K +RYPF ISK+S+ A+G TWP ++ +I+W+V+ L YDE + Q A + VDD + AD+K YL +AY FL+GDD+ + + + + + + LE E + + +LP L++ LSD K SL+E++ HR L KV+KR EE L L + L+ +A QE S D+ ER+RL +AL A E K K K W A++EVS L+ + +A AL L+P A N+ Y + + + + + ++ D++GVIRP+L ++K ++ + R + +L EE K EE + + ++E+E L VK++EE Y K ++ +A
Sbjct: 103 KSSTGLRKSTAYGSH--VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGC-------GSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPI---TARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLE----GKVKKQEEGYKAEKARMEASMA 572
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A7S4K7P6_9STRA (Kinetochore protein NDC80 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7P6_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.920e-42 Identity = 135/485 (27.84%), Postives = 253/485 (52.16%), Query Frame = 2
Query: 347 STAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRP-SGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDD-QGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQ--EDGVLTN--DVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEE---NITDVLSEVELLHKQASHSVKRKEEAYN 1774
+T RKS G S + D RP+ +K+++ + ++ L YL GY+ P++ K+L+RPSGRDFN I F+ R +DP++ + +FED+V K + YP+ ISK++L A G+P TWP ++ A+ W+++ L +++ EE+ E +AT + +++ + +K F YL +AY FL DD ++A+ E ++++ E + + E N + + ++LL G LP L++ + +D EK L++++E H+ L++KV++R E + +E L + +L+ Q+ +QEFS D+ E+ R +++A A AK + K W E+S + L+E + +Y + L L ++ + Y +++ T L Q + + N D++G + P + LK + A ++D LL ++++ E+ + TD + E+++ K+ + R+E A N
Sbjct: 63 ATPSRRKSNGGEWRQSLAPQAALKPDPRPIAEKSYMTSCINSLLQYLVSSGYEHPVSRKTLSRPSGRDFNQIVTFILRCIDPSFNDGTQKFEDEVAMAFKSLGYPYPISKTALVAAGSPHTWPTLLAALMWLIELLGCEDS---QEEDILRNEDDATM--------NSLEEIESRSEKAFFRYLNKAYVAFLSADDPQYEALEEALVEYFEKDNLKIEGEFQRVTETNMEIQEEIKQLLRNGEELPELKQRREDYATDLEKFYDLVKKLEEHKATLRKKVEERTAELVKREEGLQQITAQIDALKRQVQSQEFSVEDIRRMQKEKVRQEESIARAAGAKNEQNKALWEVSTELSQRVDQLRETVEKYNWKVMELHL-----SAERDSNQNKYELELH-TDLAQVGDPAKIFNGVDIKGSVLPMVFSLKCDFAEKCANAKRDTLKLLDQKEQTEKATAHATDCVKELDVKSKECEQ-LHRQESAEN 529
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A2R5H1W7_9STRA (Kinetochore protein NDC80 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1W7_9STRA) HSP 1 Score: 164 bits (415), Expect = 7.590e-39 Identity = 144/510 (28.24%), Postives = 248/510 (48.63%), Query Frame = 2
Query: 341 SMSTAGDRKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDID---DTK--------LDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLR---QDLSNLLVEEDKAEENITDVLSEVELLHKQASHSVKRKEEAYNKSKYALDKQVAGGKSETE 1828
++S A RKS+ + + +SD RPL +K+ + L +L++H YDQ ++ K L RP+G+DF ++ FLFR LDP+ + + D+V +K +RYPF ISK+SLAA+G+P TWP ++ ++ W+V+ L YDE ++E D +D ++ D + F Y+ +AY CFL GDD ++ + E E D EE + +LE LGQ + ++ + +P LE+ + SD K L+ + ++ ++ KV +R E R + L E A + ++ + QE + +D E E+ L + E + + E W ++ +S + ++ L Y A++L L TQ A AG+ DI DT+ DQ G G I AL++L+ +++T +R +L + E D+A+E + V+ +E ++A +++ K A+D ++A +ETE
Sbjct: 62 TVSVASRRKSIATMGSATSAL----KSDPRPLNEKSFRAQCIETLIRFLSEHNYDQALSPKILHRPTGKDFEHVVIFLFRMLDPSRKFGSKVADEVTVMMKGLRYPFNISKTSLAAVGSPHTWPALLASLVWLVELLEYDELAGLSE-----------------DDDDDASEEDID-RIFFTYIRKAYQCFLCGDDNRYEELDAELAGKFRERDVVIEEEITDLERKRSDLGQDLEFESEKQSLIPELEQRKRDFTSDKLKWDKLIRQFLENKDIMVAKVREREAEVRAKEVELAQAEHAKSKVQSILDEQELNPADAERMTQEKRSLEASCNTVLEQRDDMQNETWEVEMSISKRTQRIEALLEEYNAIAKSLKL----TQAAA-AGQQRQGADIQLRLDTRRNMLVSLGADQATGQGERADVGAITSALQDLREESIKKTHQIRTSNMELHAKVEENDEAQEAVRSVIRGLEQRLQEAETQLQQ-------DKSAMDAELASRAAETE 537
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A7S3PLI3_9STRA (Kinetochore protein NDC80 (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLI3_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.450e-38 Identity = 132/464 (28.45%), Postives = 227/464 (48.92%), Query Frame = 2
Query: 416 RSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQASH----SVKRKEEAYNKSKYALD 1795
++D RP+ +K ++AS+ KL +L++H YD PI+ K L+RP+G+DF N+ FLF +D N + +F D+V P K + YPF ISK++L+A+G+ TWP ++ ++ W+++ L Y E +R RE E +D + D K F YL +AY FL GDD+ + + E E D+ +E LE E L + ++ + +SLPAL K D K L++++ H+ L+ K+ E ++ L A L++Q+ QE S +D E +SER + + +K W ++ ++ E L+ +Y E A L LVP + A+N+ + + ++ + +L DV+ V++ +L LK + + +T ++ + +K EE +V S + L ++ S+ KEEA + K D
Sbjct: 113 KNDPRPISNKGFMHASIRKLIQFLSEHNYDHPISPKVLSRPTGKDFQNVLQFLFLLVDRNLKFGQKFTDEVPPIFKGLCYPFNISKTALSAVGSLHTWPPLLASLIWLMELLEYHEA-------ERHRESE-------------IDLENGD-KVFFTYLRQAYQSFLCGDDDKSEELDNELLGTFGERDSAIQEQTSQLETQREDLLKDLDKIKNSKSSLPALTCQKKDYQEDLVKFQGLVKKLREHKENLEGKLRSSEAEFNARQQELNEALSVKAKLQKQLDEQELSPADAERIISEREAATVEQGQVNQKREGMQKSAWEIEMTIAKKLEQLENMTSKYNEVAARLKLVP---KSAQNSQGVDFELKLNLAGFGNGEDLLNVDVKKVLKTSLFSLKDSAMTKTNEIKTQCMEFQEQVEKNEEEKVEVESRILRLEQELKELEKTSILEKEEAERERKMITD 552
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A1V9Z1G3_9STRA (Kinetochore protein NDC80 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1G3_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.630e-38 Identity = 114/370 (30.81%), Postives = 193/370 (52.16%), Query Frame = 2
Query: 356 GDRKSVGV-RRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEAL 1462
G SVG RR+++FG G +D RP+ D+ +N ++ L +LT+H Y+ PINS L +P +DF I FLF+QLD +Y PS +FEDD+ + + +RYPF ISK++LAA+G+P +WP ++ AI W++D L Y E+ D+++ DD G YL ++Y FL +D+ +A+ + E E E + +L + NE + Q +E ++ L + + D EK+ L+E++E+++ L + + + +E L + L+++I TQ+FSA D++ ER R++D L + + + W + E+S K+ L+E++ RY A L
Sbjct: 62 GRNGSVGSGRRSSAFGVRGSRTNDPRPISDRGFMNNAIRMLVEFLTEHNYEHPINSHLLFKPMKKDFIYIMQFLFKQLDRSYEPSPKFEDDIAIWFRHLRYPFPISKTALAAVGSPHSWPTLLAAIKWLIDLLKYHESTT--------------------DRDEMEDDIGVTANIVFEYLADSYKAFLSDNDDECKALQQQMVERFATEVDVYYEDINDLRQQNEEILQEIEEHQNEM-QLDSFIAKKRDCQHDREKLLQLVEKLESNKSLSLASIQSNEHKIAKKQEDLRDAQAEIIQLQKRIDTQQFSAEDVDRMEGERHRMQDLLEQFDARYKELQSQHWEKETEISKMKDVLEEDVKRYMNTATRL 410
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A7S3UM16_HETAK (Kinetochore protein NDC80 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM16_HETAK) HSP 1 Score: 151 bits (382), Expect = 3.840e-38 Identity = 93/218 (42.66%), Postives = 127/218 (58.26%), Query Frame = 2
Query: 443 KAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRP--SGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVD-DQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALE 1087
K H+ AS+ +L YL+D GYD PI+ K L RP+GRDF NI FLFRQ+DPN+ P +G FE+ V+ K +RYPF ISK++L+A+G+P TWP ++G+++W+V+ L YD AE EQ E D G D DQ +D + F+ YL AY FL GDD+ + A+ E D A L L NE L + Q+L + + LP LE
Sbjct: 1 KKHVAASVRQLVNYLSDRGYDHPISPKILQRPTGRDFQNIVTFLFRQVDPNWAPEAAGSFENAVIATFKTLRYPFAISKTALSAVGSPHTWPTLLGSLTWLVELLEYD-----AEVEQARAEA---------DHHLGFDGDQASDDRAFMDYLGRAYTAFLMGDDDLYAALEGELVAGFDRGQGRAAADLAALRGRNEDLQRQLQQLEARRDRLPQLE 204
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: A0A0D2WHJ3_CAPO3 (Kinetochore protein NDC80 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WHJ3_CAPO3) HSP 1 Score: 158 bits (399), Expect = 1.400e-36 Identity = 127/441 (28.80%), Postives = 219/441 (49.66%), Query Frame = 2
Query: 422 DQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQ-GADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQAS 1741
D RPL DK ++ S+ L ++LT HGY +N K L+ PS DF + FL+ LD +Y +G+ ED++ K ++YPFTISKSSL A+G+P TWP ++GA+SW+V+ + Y ++ + A + DG D + +D + F YL AY FLEG D + + E D + + + L + +A +E + + L A+E KL +SD +K ++ +E H+ + K+D +E K L L + A L+ QI Q+ S +D+E ER ++ +AL A A+ + + W +++V+ +++ + Y + AE L+++P A NA + + ++ + VL DV RPAL L+ + + L++ ++ E +T+ +EV +L +A+
Sbjct: 164 DPRPLSDKTYMADSIRNLMSFLTQHGYSTAVNVKMLSSPSVTDFQRMFKFLYAHLDASYPFAGKLEDEIPVLFKRMKYPFTISKSSLFAVGSPHTWPTLLGALSWLVELVTYSMSV-----DPMACLFPSVG--------DGFDQELRSDNQIFFEYLSRAYVSFLEGSDN-YDDLRAELANTFDARNVMIDRDVERLTQEKDAYLAEIEESR-KPSPLEAIEARRKLMVSDKDKFLKYVQNLEQHKVANERKLDDHAQEVTAAKRELDQLHQDRAQLQAQIDAQDMSPADVERITKERQQVDEALRAAVVAREEMERIAWEREMQVTRKIAEMEQMISAYNKLAETLMIIPTD---AVNADGVDFEIQLNMNGSNPH-SVLNVDVNEHARPALTRLREKFTVQHQLATEQLASCQERLEQEAEMVTERETEVNVLESKAA 585
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Match: H3GCH0_PHYRM (Kinetochore protein NDC80 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCH0_PHYRM) HSP 1 Score: 155 bits (392), Expect = 4.430e-36 Identity = 144/472 (30.51%), Postives = 240/472 (50.85%), Query Frame = 2
Query: 338 PSMSTAGDRKSVG---VRRTTSFGT-------GGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTR-PSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAIGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEA---RDE--------------EDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQV--EVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETTYAVDIDDTKLDQEDGVL--TNDVRGVIRPALKELKI-AIVRRTAGLRQDL 1654
P+ S+A +R+S+G VRR++++G+ GG D RP DK++LN+ + L +L+DH YDQ + L R PS ++F N+ FLF+Q+DP + +FE+DVV + +RYP ISK+SLAA+G P TWP ++ +ISW+++ L YDE I +A E +++ E D+E+G K F YL+ +Y FL G+D+ + + E +DE + ++ LE+ E L + + + N+L L+ SD +K + + E + L++KV EE++ +++ L + ++ L +I QE SA D+E ER+RL D L QV ++ ++ K++ +R E+ + L +VP + A+NA Y +++D +L++ D VL + ++ +R A ELK I R AGL Q L
Sbjct: 31 PNKSSASERQSIGISVVRRSSTYGSRSSVSGRGGTRVLDPRPTSDKSYLNSCVKTLVEFLSDHMYDQTLPHGLLRRGPSKKEFCNMILFLFKQVDPTFEFGVKFEEDVVLQFRNLRYPIPISKTSLAAVGTPHTWPTLLLSISWLIELLTYDEAIQLANESEQSEEN---------DEENG-------DKLFFKYLDASYHAFLAGEDDKFAMLERQEREKLTFKDEYCLLTLGWFFVTVTRNETVKQETSELEQQREELKKRIENAKKEKNALSLLKANKLDCESDLKKFKDYVAKHEKRKAKLEKKVGSLAEEQQSIEDELNVRQQEIQRLLTRIENQELSAYDIEQIAQERARLTDQL----------------HQVIDRQNALQQQTKKDENRGVEKRDILKIVP---RTAKNALNFDYTLELDQ-ELEELDAVLKLNHHLKTSVRKAALELKQNRIARANAGLDQAL 466 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1268.1644.1 >prot_E-siliculosus-1a_F_contig1268.1644.1 ID=prot_E-siliculosus-1a_F_contig1268.1644.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1644.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=749bp MAARRRTTLAAVSSASLNSRGSMGTTSSGRSSLASSKQPSSRFSISTSSAback to top mRNA from alignment at E-siliculosus-1a_F_contig1268:3224..12772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1268.1644.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1644.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1644.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9549bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:3224..12772+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1268:3224..12772+ >mRNA_E-siliculosus-1a_F_contig1268.1644.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1644.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1644.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4494bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:3224..12772+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |