mRNA_E-siliculosus-1a_F_contig1268.1643.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1643.1 vs. uniprot
Match: D8LLF1_ECTSI (Kinesin (KAR3 subfamily) (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF1_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 1.580e-154 Identity = 346/414 (83.57%), Postives = 350/414 (84.54%), Query Frame = 1
Query: 241 GAGAIHEPQSFDHLRVPAKPSASSTRVVDAXXXXXXXXXXXXXXXXXXXXASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPSTSSVPAPSAGVTHNYLRRGXXXXXXXXXXXXXSPTNRSSPTSXXXXXXRRPRSPSLAXXXXXXXXXXXXPPLHPSRIPCAAEPTAARPGAATTPGAAGSTRNRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPPVDGPSPMSLLSNTLSAIGLAVGVNSGGKPPRSPRASKGSPRLSISGSGSSPRVSPRXXXXXAARSRTSPFFDTSGSGGGCEGLPCMLEEDEEEDFPLGVARQSLESRLADAAAASSSLAAVAHRASVENMQN-SPATSLSPFTKSSTTVRRTSTSRYNVNGE 1479
GAGAIHEPQSFDHLRVPAKPSASSTR+VDA XXXXXXXXX ASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPS+SSVPAPSAG THNYLRRGXXXXXXXXXXXXX PTNRSSPTSXXXXXXRRPRSPSLA PPLH SRIP AAEPTAARPGAA TPGAAGSTRNRSS XXXXXXXXXXXXXXXXXXXXXXXX AA PVDGPSPMSLLSNTLSAIGLAVGVNS GKPPRSPRASKGSPRLS+SGSGSSPRVS XXXXX SRTSPFFDTSGSGGGCEGLP MLEEDEEEDFPLGV RQSLESRLADAAAASSSLAAVAHRAS+ENMQN SPATSLSPFTKSSTTVRRTSTSRYNVNGE
Sbjct: 82 GAGAIHEPQSFDHLRVPAKPSASSTRIVDAAANQHHLGAXXXXXXXXXL-ASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPSSSSVPAPSAGATHNYLRRGXXXXXXXXXXXXXXPTNRSSPTSXXXXXXRRPRSPSLARSPTAAGAGRSSPPLHLSRIPRAAEPTAARPGAAATPGAAGSTRNRSSPRRQRHMSSSQALRNVAGXXXXXXXXXXXXXXXXXXXXXXXXAEGDGNGGAAAPVDGPSPMSLLSNTLSAIGLAVGVNSCGKPPRSPRASKGSPRLSVSGSGSSPRVSXXXXXXXXXXSRTSPFFDTSGSGGGCEGLPRMLEEDEEEDFPLGVTRQSLESRLADAAAASSSLAAVAHRASLENMQNNSPATSLSPFTKSSTTVRRTSTSRYNVNGE 494
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1643.1 vs. uniprot
Match: A0A6H5KIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW8_9PHAE) HSP 1 Score: 460 bits (1184), Expect = 2.860e-154 Identity = 343/415 (82.65%), Postives = 346/415 (83.37%), Query Frame = 1
Query: 241 GAGAIHEPQSFDHLRVPAKPSASSTRVVDAXXXXXXXXXXXXXXXXXXXXASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPSTSSVPAPSAGVTHNYLRRGXXXXXXXXXXXXXS-PTNRSSPTSXXXXXXRRPRSPSLAXXXXXXXXXXXXPPLHPSRIPCAAEPTAARPGAATTPGAAGSTRNRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPPVDGPSPMSLLSNTLSAIGLAVGVNSGGKPPRSPRASKGSPRLSISGSGSSPRVSPRXXXXXAARSRTSPFFDTSGSGGGCEGLPCMLEEDEEEDFPLGVARQSLESRLADAAAASSSLAAVAHRASVENMQN-SPATSLSPFTKSSTTVRRTSTSRYNVNGE 1479
GAGAIHEPQSFDHLRVPAKPS SSTRVVDA XXXXXXXXXXXXXXXXXXXASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPS+SSVPAPSAG THNYLRRGXXXXXXXXXXXX S PTNRSSP XXXXXX RPR XXXXXXXXXXXX HPSRIP AAEPTAARPGAA TPGAAGSTRNRSS XXXX XXXXXXXAA PVDGPSPMSLLSNTLSAIGLAVGV GKPPRSPRASKGSPRLS+SGSGSSPRVSP AARSRTSPFFDTSGSGGGCEGLP MLEEDEEEDFPLGVARQSLESRLADAAAASS+LAAVAHRASVENMQN SPATSLSPFTKSSTTVRRTSTSRYNVNGE
Sbjct: 88 GAGAIHEPQSFDHLRVPAKPSTSSTRVVDAAXXXXXXXXXXXXXXXXXXXASARKRVGAAEQTRGIQMGPLRVRTPAKPKRSRADATPFHAPSSSSVPAPSAGATHNYLRRGXXXXXXXXXXXXASSPTNRSSPXXXXXXXXXRPRXXXXXXXXXXXXXXXXXXXXHPSRIPRAAEPTAARPGAAATPGAAGSTRNRSSPRRQRHMSSSQALRNVAGGNGEDXXXXEATFMENDNGDHDGGAXXXXXXXAAAPVDGPSPMSLLSNTLSAIGLAVGV---GKPPRSPRASKGSPRLSVSGSGSSPRVSPWSSPRAAARSRTSPFFDTSGSGGGCEGLPRMLEEDEEEDFPLGVARQSLESRLADAAAASSNLAAVAHRASVENMQNNSPATSLSPFTKSSTTVRRTSTSRYNVNGE 499 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1268.1643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1268.1643.1 >prot_E-siliculosus-1a_F_contig1268.1643.1 ID=prot_E-siliculosus-1a_F_contig1268.1643.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=493bp MMSSAAFERSLRGGASSSSSSMATSSSSSTSSLRPPKKKSVTWDDDEVLPback to top mRNA from alignment at E-siliculosus-1a_F_contig1268:638..2673- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1268.1643.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1643.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2036bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:638..2673- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1268:638..2673- >mRNA_E-siliculosus-1a_F_contig1268.1643.1 ID=mRNA_E-siliculosus-1a_F_contig1268.1643.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2958bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1268:638..2673- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |