mRNA_E-siliculosus-1a_F_contig1267.1640.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 1041 bits (2693), Expect = 0.000e+0 Identity = 504/541 (93.16%), Postives = 523/541 (96.67%), Query Frame = 1
Query: 1 MRVLKARCNARRLLVTTCVLAAQGVAPPAARVEIDVGFQGKPDKEQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
MRV K RCNAR LLVTTCVLAAQGV PPA RVEID GFQGKPD EQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLPDWKPN+STRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPF+LTIAGD PTLD+NSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDI+SSVIQKCWGYADVRVGN RLTYQVLM ALPPSWEGKLSFVDHMA FE++W+E+NPTMT LEDVR+W+LG+SPDDDNGLGKM+GYETRDPRVSFMSVFPMYQAKLFEN++SNNGINGVRRFA S HFHYVSSDAS PETRNGTIMVHSTITEM+ANVMIGRAVETKAKLY KAAASTDEIR+MSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVW+G LCPDWCMKQAP+S+SKTESGVVEVRRC RNTDQP
Sbjct: 1 MRVTKGRCNARLLLVTTCVLAAQGVVPPAVRVEIDGGFQGKPDNEQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLPDWKPNTSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQVLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFPMYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRCPRNTDQP 541
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 894 bits (2311), Expect = 0.000e+0 Identity = 442/493 (89.66%), Postives = 456/493 (92.49%), Query Frame = 1
Query: 136 QAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLPDWKPNSSTRFIYVWIANKDQ--ILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLR 1608
QAHSYRS ERA HTASGDGLHKATVGR ASFTIQLVGDQLGSLPDWKPNSSTRFIYVWIANKDQ ILIAEV DGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPF+LTIAGD PTLDVNSLPVCSTHED NKDI DTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTL+DMVLAAGQKHDIQSSV+QKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMA F ++W EENPTMTALEDVRMWYL +SPDDDNGLGKMD YETRDPR MYQAKLFEN+ S NGI RRFAVSQHFHYVSSDAS PETRNGTIMVHSTITEM+ANVMIGRAVETKAKLY KAAASTDEIR+M+AE GK+FQVCSDCPSALLPFHVKAIPESVCEIV+SLPG AKTGE W G LCPDWCMKQAPVS+S T+SGVVEVR C R
Sbjct: 27 QAHSYRSLERASHTASGDGLHKATVGRSASFTIQLVGDQLGSLPDWKPNSSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAGFGIMWEEENPTMTALEDVRMWYLSSSPDDDNGLGKMDAYETRDPR--------MYQAKLFENEQSKNGI---RRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQAPVSQSTTQSGVVEVRWCRR 508
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 830 bits (2143), Expect = 2.020e-296 Identity = 428/619 (69.14%), Postives = 468/619 (75.61%), Query Frame = 1
Query: 1 MRVLKARCNARRLLVTTCVLAAQG---VAPPAARVEIDVGFQGKPDKEQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGS----LPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQ-----------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
M+ K NAR L VTTC LAAQ VA P +RVEID GFQGKPD EQAHSYRSHERAPHTASGDGLHKATVG PASFTIQLVGD LG LP+W+ S RFIYVWIAN+DQIL AEVVDGG K+GTLTATYKSDFPG+Y V+I+EV+ SKK EGVPILGSPF+LTIAGD PTL+VNSLPVCS+ EDAN DIADTFWR GTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLAS+ GEPTWLLVLGGSV+RGVFLTL+DMVLAAGQK I+SSV+ KCWGYADVRVGNLRLTYQ VLMDA+PPSWEGKL FVDHMA W EENPTMTAL++V +W+ SPDDDNGLGKMDGY+TRDPRVSFMSVFPMYQAKLFEN+ S NGI RRFA SQHFHY+S + S PETRNGTIMVHSTITEM+ANV++GRAVETKA L+ KAAAS DEI+++S+EVGKSFQVC DCP LLPFHVK IPE VCEI+ESLPG AK G+VWSG LCPDWCMKQ PVS+ T+S VV+VR C T QP
Sbjct: 1 MKTWKTLFNARLLFVTTCALAAQEDLRVALPISRVEIDGGFQGKPDNEQAHSYRSHERAPHTASGDGLHKATVGMPASFTIQLVGDNLGDFHVLLPNWERIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKKGEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNGLGKMDGYQTRDPRVSFMSVFPMYQAKLFENEGSRNGI---RRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKAAASKDEIQKLSSEVGKSFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMCSARTHQP 616
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 723 bits (1865), Expect = 3.140e-255 Identity = 388/542 (71.59%), Postives = 406/542 (74.91%), Query Frame = 1
Query: 325 QILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQ-VLMDALPPS----------------WEGKLSF---------------------VDHM------------AAF------------------------------------------EVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQ-----------------VCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
QILIAEV D GSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPF+LTIAGD PTLDVNSLPVCSTH+DANK+IADTFWRSGTWLSS+VASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTL+DMVLAAGQK+DIQSSV+QKCWGYADVRVGNLRLTYQ + D L W +L F VD + AAF EV+W+EENPTMTALEDVRM YL SPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFEN+ S NGI RRFAVSQHFHYVSSDAS PETRNGTIMVHSTITEM+ANVMIGRAVETKAKLY KAAASTDEIR+M+AEVGKSFQ VCSDCPS+LLPFHVKAIPESVCEIVESLPGHAKTGE W G LCPDWCMKQAPVS+SKTESGVVEVRRC RNTDQP
Sbjct: 13 QILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIFREGGPWPTVVMAPSNLIPSNNEGTQFSVEEVLWKEENPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENEQSKNGI---RRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQAKAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWCMKQAPVSQSKTESGVVEVRRCRRNTDQP 551
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 706 bits (1822), Expect = 1.090e-248 Identity = 355/554 (64.08%), Postives = 409/554 (73.83%), Query Frame = 1
Query: 178 ASGDGLHKATVGRPASFTIQLVGDQLG---SLPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQ---------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
ASGDGLH+ATVG ASFTIQLVGD++G SLPDW+PNSS RFIYVWI++KDQILIAEVV GS NGTLTATYKSDFPGDYLV+++EV+ S++ EG+PI+GSPF+L IAGD PTLDV+SLPVC + +D + DIADTFWR GTWLS+NVASAAHGVMR GWVFQPKSCVFDTFSY+DLMLLAS DGEPTWL+V+GGSVQRGVFLTLVDM LAAGQK D+ +SV++KCWGYAD+RVGNLRLTYQ VLMD+LPPSWEGKL FVDHMA F + W + NPT AL+DVR+ G +P DD L KMDGY+T+DPRVSFMS FPMYQAKLFEN+ S GI R + S H+HY+SS SDPE NGT MVHST+TEM+AN+M+G+AVETKA+LY KAAAST Q A+VGKSFQVCSDCP +LP HVK IPE VCEIVESLPG+A+TGEVW G LCPDWCMKQAPVS+ +T+SG V+VR C T QP
Sbjct: 2 ASGDGLHQATVGISASFTIQLVGDEVGGGGSLPDWEPNSSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNVNHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGRTPTDDVALRKMDGYQTQDPRVSFMSAFPMYQAKLFENERSRQGI---RHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSIETRQP 552
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 704 bits (1817), Expect = 3.920e-248 Identity = 366/564 (64.89%), Postives = 422/564 (74.82%), Query Frame = 1
Query: 4 RVLKARCNARRLLVTTCVLAAQGV----APPAARVEIDVGF----------QGKPDKEQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLG-----SLPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNS-----PDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
RV KAR A+ +L T LAAQ APP+ R+EI QG+PD +QAH Y S+E A HTASGDGLH+ATVG ASFTIQLVGD LG SLP+W+PNSS+RFIYVWI+N+DQILIAE+V G+ GTLTATYKSDFPGDYLVY++EV+ S++ EG+PI+GSPF+L IAGD PTLDVNSLPVC + ED + DIADTFWR GTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSY+DLMLLASLDGEPTWL+V+GGSVQRGVFLTLVDMVLAAGQK DI +S + KCWGY D+ VGNLRLTYQ +V W E NPTM ALEDV + + G P D + L KMDGY+ RD RVSFMS FPMYQAK FEN+ S G RR+ + H+HY+SS AS+PE NG+IMVHST+TEM+ANVMIGRAVETKA L+ KAAASTD +Q A+VGKSFQVCSDCP L+PFHVK IP+ +CE ESL G A+ GEVW+G LCPDWCMKQAPVS+ T+SG V+VR C TDQP
Sbjct: 3 RVGKARVVAQLVLATAGALAAQRGYPRDAPPSLRLEIHRELSASANQPEFIQGRPDTDQAHGYSSNESAAHTASGDGLHEATVGISASFTIQLVGDNLGGSGGSSLPNWEPNSSSRFIYVWISNEDQILIAEIVGDGN-TGTLTATYKSDFPGDYLVYVEEVQPSEQGEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQ-----------------------DVYWYEGNPTMAALEDVSIAFTGGRASRRPPFDGSALSKMDGYQARDSRVSFMSAFPMYQAKFFENEGSKQG---TRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLKTDQP 539
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 637 bits (1643), Expect = 2.240e-220 Identity = 344/631 (54.52%), Postives = 394/631 (62.44%), Query Frame = 1
Query: 223 SFTIQLVGDQLG---SLPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQ---------------------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAK--LFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANV------------------------------------------------------------------------------MIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
SFTI+LVGD++G SLPDW+PNSS RFIYVWI +KDQILIAEVV GS NGTLTATY+SDFPGDYLV+++EV+ SK+ EG+PI+GSPF+LTI GD PTLDV+SLPVC + +D + DIADTFWR GTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSY+DLMLLASLDGEPTWL+V+GGSVQRGVFLTLVDM LAAGQK D+ +SV+QKCWGYAD+RVGNLRLTYQ VLMD+LPPSWEGKL FVDHMA F + W + NPT TAL DVR+ G +P DD L KMDGY+T+DPRVSF+S FP+ A+ LFEN+ S GI R + S H+HYVSS SDPE NGT MVHST+TEM+ANV MIGRAVETKA+L+ KAAAST+ Q S +VGKSFQVCSDCP LLP HVK IPE VCE VESLPG+A+TGEVW G LCPDWCMKQAPVS+ +T+SG V+VR C T P
Sbjct: 2 SFTIELVGDEIGGGGSLPDWEPNSSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQWPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRITATGRTPTDDFALRKMDGYQTQDPRVSFISAFPVSFAERNLFENERSRQGI---RHYGASIHYHYVSSTTSDPEAHNGTTMVHSTMTEMLANVSRRRVLTGTKAVSPRHFFVVSGFRDQQRKAGIEGEMLLVSKRTCWDRLQCPCTAEPKPPDAPFVFCRATFLYKSYSQIMIGRAVETKAELHAKAAASTEGSEQQSVDVGKSFQVCSDCPRQLLPAHVKPIPEPVCETVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSMETRLP 629
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 623 bits (1607), Expect = 3.900e-218 Identity = 343/544 (63.05%), Postives = 368/544 (67.65%), Query Frame = 1
Query: 1 MRVLKARCNARRLLVTTCVLAAQG---VAPPAARVEIDVGFQGKPDKEQAHSYRSHERAPHTASGDGLHKATVGRPASFTIQLVGDQLGSLPDWKPNSSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQVLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRCLRNTDQP 1623
MRV KAR NA L VT C LAAQ VAPPA V +D G Q KPD EQ ILIAEVVD GSKNGTLTATYKSDFPG Y VYIDEVE S+KD AN DIADTFWR GTWLSSNVASAAHGV+RNGWVFQP SCV DTFSYEDLMLLASLD EPTWLLVLGGSVQRGVFLTL+DMVLAAGQK+DI SSV++KCWGYADV+VGNLRLTYQ W EENPTMTAL+ V + + G P+DDNGLGKMDGY+TRD RVSFMSVFPMYQAKLFENQ S NG+ RRFA SQHFH+VS+DAS PETRNGTIMVHSTITEM+ANVM+GRAVETKAKLY KAAASTDEIR++SAEVGKSFQVCSDCP +LLPFHVK IPE VC+IVESLPG AKTGEVWSG LCPDWCMKQAPVS++KTES VV+VR C NTDQP
Sbjct: 1 MRVTKARFNAGLLFVTACALAAQDDPRVAPPAVTVNVDRGSQDKPDNEQ---------------------------------------------------------------ILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRKD----------------------------------ANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ-----------------------GCYWTEENPTMTALKGVGIRFGGRWPNDDNGLGKMDGYQTRDSRVSFMSVFPMYQAKLFENQKSRNGL---RRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVRECGGNTDQP 421
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 1.220e-153 Identity = 252/595 (42.35%), Postives = 351/595 (58.99%), Query Frame = 1
Query: 79 PPAARVEIDVGFQGKPDKEQAHSYRSHER-APHTASGDGLHKATVGRPASFTIQLVG--------DQLGSL-PDWKPN-SSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDE---GVPILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQ----------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMWYLGNSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVG---KSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVVEVRRC 1602
PPA+ + + +G+P++ QA Y R APHTA+G GL A+ G PASFTI+L G +Q G PDW N RFIYVW+A++D + +A V + G NGTLTA Y+S FPGDYLV++++V +D G PI+GSPF+LT++GD P +DV++LPVC E +D+A ++WR+G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY+DLMLLA LD EP WLL LG S+ RG+FLT++DM LA GQK + +SV++KCWG+ D+R+GNLR++YQ VLMDALP SW G L +D + + W NPT+ L V+ + D+GL +M+ Y RDPRV+FMS FPMYQ +LFEN++S G R + S H+HYVS D + PE G MVHS +TEM+ANV+I RAV TKA L +A + ++ + E ++F++C+DCP+ L+P HVK P C+ V +LPG+A G+ W CPDWCM + P ++ +G+V+VR C
Sbjct: 39 PPASPM-LPPFLEGQPERWQARFYGPDVRVAPHTAAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCG-GEGEEEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIG---ERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADTRTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 624
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 300 bits (769), Expect = 1.730e-91 Identity = 201/493 (40.77%), Postives = 265/493 (53.75%), Query Frame = 1
Query: 292 RFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESS-------KKDEGV---PILGSPFNLTIAGDTPTLDVNSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIQSSVIQKCWGYADVRVGNLRLTYQVL--------MDALPPSWEGKLSFVDHMAAFEVVWREENPTMTALEDVRMW--------YLGNSPDDDN-------------------------GLGKMDGYETRDPRVSFMSVFPMYQAKLFENQDSNNGINGVRRFAVSQHFHYVSSDASDPETRNGTIMVHSTITEMVANVMIGRAVETKAKLYTKAAASTDEIRQMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWSGGLCPDWCMKQAPVSESKTESGVV---EVRRCLR 1608
F+YVWIA+ D +L A VVD G +GTLTATY+S +PGDYLV++ +V + KK G I+ SPF LTI+G+ +DV+ LP+C E +D DTFWR+G+W+SS ASA HGV+R+GWVFQPK+CV DTFSY+DLMLLA+ EPTWLL+LG SVQRGVFLTLVDMVLA GQK D +S IQKCWG+A+VRVGNLRLTYQ L D + KL+ ++++A F R + + W ++ +S + N GLG Y+ + V P + F D NG+ ++R+ D T+ ST ++I +AV +KA LY KA ST+ R E+ F+VC+DCP++L+P HVK +P VC L G A GE W G CP WC K+ PV GV+ +VR C R
Sbjct: 5 HFVYVWIASTDHVLHAAVVDNG--DGTLTATYESPYPGDYLVHVQDVCTDMSVVGRGKKRPGERAKAIVDSPFRLTISGEI-AVDVDDLPLCDA-EHPQEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLA-INNVAVFVAAARRFL-RRSVFAAGKQWPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNP-TAATLAEVNPTWHLSKFIGVD--NGLGRIKRY-----------QQQDARTK-----FMSTFP-----IVISKAVGSKAALYEKATPSTNTHRGGGNEI---FEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWCSKE-PVD------GVLNLKDVRVCSR 457 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1267.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1267.1640.1 >prot_E-siliculosus-1a_F_contig1267.1640.1 ID=prot_E-siliculosus-1a_F_contig1267.1640.1|Name=mRNA_E-siliculosus-1a_F_contig1267.1640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=542bp MRVLKARCNARRLLVTTCVLAAQGVAPPAARVEIDVGFQGKPDKEQAHSYback to top mRNA from alignment at E-siliculosus-1a_F_contig1267:23305..31587+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1267.1640.1 ID=mRNA_E-siliculosus-1a_F_contig1267.1640.1|Name=mRNA_E-siliculosus-1a_F_contig1267.1640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8283bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1267:23305..31587+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1267:23305..31587+ >mRNA_E-siliculosus-1a_F_contig1267.1640.1 ID=mRNA_E-siliculosus-1a_F_contig1267.1640.1|Name=mRNA_E-siliculosus-1a_F_contig1267.1640.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1267:23305..31587+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |