mRNA_E-siliculosus-1a_F_contig12632.1628.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: D8LEI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI7_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 3.070e-22 Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 1
Query: 1 APQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV 153
A QEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK+
Sbjct: 251 AVQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKL 301
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A6H5K102_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K102_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.070e-21 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 1 APQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK 150
A QEFQRVLTDFQGCEEQL+SEAQDGMRKHVVFESSSLANQQYDLQMLFK
Sbjct: 252 AVQEFQRVLTDFQGCEEQLMSEAQDGMRKHVVFESSSLANQQYDLQMLFK 301
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A7S3YL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL22_HETAK) HSP 1 Score: 61.2 bits (147), Expect = 1.400e-10 Identity = 29/48 (60.42%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 10 EFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV 153
++Q +LT FQ EE ++EA+DG+RK +V E+S+LANQQYD+QMLFKV
Sbjct: 84 DYQCILTSFQKIEELYLAEARDGLRKQLVLEASALANQQYDVQMLFKV 131
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A835YMJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ7_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 9.590e-8 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 10 EFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV 153
E Q L + Q E SE QDG+R++ VFESS+LAN+QYD+QM+FKV
Sbjct: 105 ELQASLNENQAAESTFASELQDGLRRNAVFESSTLANEQYDVQMVFKV 152
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A7R9YC05_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC05_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 9.740e-8 Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 13 FQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK 150
Q ++T+ Q EE+++ QD +R+H VFESS+LANQQYD+QMLFK
Sbjct: 307 LQILVTEAQSLEEEVLQGLQDSLRQHAVFESSALANQQYDVQMLFK 352
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A812VW49_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VW49_SYMMI) HSP 1 Score: 53.9 bits (128), Expect = 1.940e-7 Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 16 QRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFK 150
Q + T QG +E + QD MRK +VFESSSLANQQYD+QMLFK
Sbjct: 136 QILHTKMQGMQESFILLLQDHMRKMIVFESSSLANQQYDIQMLFK 180
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A4D9DAU7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAU7_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.630e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 APQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV 153
A E QRVL +Q CEE+ + +RK +VFESS LAN+Q++ Q++FKV
Sbjct: 171 AAHELQRVLCHYQSCEERCIERLAVVLRKQIVFESSCLANEQFEAQIIFKV 221
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: W7U4J7_9STRA (FCH domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4J7_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.630e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 APQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKV 153
A E QRVL +Q CEE+ + +RK +VFESS LAN+Q++ Q++FKV
Sbjct: 318 AAHELQRVLCHYQSCEERCIERLAVVLRKQIVFESSCLANEQFEAQIIFKV 368
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: A0A2D4CDT3_PYTIN (FCH domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDT3_PYTIN) HSP 1 Score: 50.8 bits (120), Expect = 5.700e-6 Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 13 FQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQML 144
Q VLT+FQ E +S +RKHVVFESS+LAN+QYD QM+
Sbjct: 247 LQSVLTEFQQIAEHRISNLATNLRKHVVFESSALANEQYDWQMI 290
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Match: K3WMP0_GLOUD (F-BAR domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP0_GLOUD) HSP 1 Score: 49.7 bits (117), Expect = 1.460e-5 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 13 FQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQML 144
Q VLT++Q E +S +RKHVVFESS+LAN+QYD QM+
Sbjct: 280 LQSVLTEYQQIAEHRISNLATNLRKHVVFESSALANEQYDWQMI 323 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12632.1628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12632.1628.1 >prot_E-siliculosus-1a_F_contig12632.1628.1 ID=prot_E-siliculosus-1a_F_contig12632.1628.1|Name=mRNA_E-siliculosus-1a_F_contig12632.1628.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=51bp APQEFQRVLTDFQGCEEQLVSEAQDGMRKHVVFESSSLANQQYDLQMLFKback to top mRNA from alignment at E-siliculosus-1a_F_contig12632:853..1005+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12632.1628.1 ID=mRNA_E-siliculosus-1a_F_contig12632.1628.1|Name=mRNA_E-siliculosus-1a_F_contig12632.1628.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=153bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12632:853..1005+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12632:853..1005+ >mRNA_E-siliculosus-1a_F_contig12632.1628.1 ID=mRNA_E-siliculosus-1a_F_contig12632.1628.1|Name=mRNA_E-siliculosus-1a_F_contig12632.1628.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=306bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12632:853..1005+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |