mRNA_E-siliculosus-1a_F_contig1262.1618.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: A0A6H5JH04_9PHAE (CYTOSOL_AP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH04_9PHAE) HSP 1 Score: 284 bits (726), Expect = 3.350e-90 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 414
GAARVALGTEVPVVFCNDE+LAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA
Sbjct: 534 GAARVALGTEVPVVFCNDEDLAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 671
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: D7FXS8_ECTSI (Leucyl aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS8_ECTSI) HSP 1 Score: 279 bits (713), Expect = 1.120e-89 Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 414
GAARVALGT+VPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKA PSTEEGEG KKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA
Sbjct: 400 GAARVALGTDVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKAPPSTEEGEGRKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 537
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: A0A835YM69_9STRA (Leucyl aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM69_9STRA) HSP 1 Score: 187 bits (476), Expect = 9.940e-55 Identity = 88/137 (64.23%), Postives = 108/137 (78.83%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGS 411
GAARVALGT+VP +FCN++E+AA+L TLS + D VWR+PLWEGYR L+SKIAD+ N+ +GGYGGAITAALYLDEFVG A +EG K WIH+DFM FN +S PGRPEGGE+ GMRAL+ALL ++YG+
Sbjct: 366 GAARVALGTDVPAMFCNNDEVAAQLMTLSAAAHDHVWRMPLWEGYRKLLASKIADMNNISSGGYGGAITAALYLDEFVGVPA----KEGGDAPAAKPTWIHIDFMGFNRSSSPGRPEGGEAMGMRALHALLRERYGA 498
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: R1BQN8_EMIHU (CYTOSOL_AP domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BQN8_EMIHU) HSP 1 Score: 177 bits (450), Expect = 1.290e-50 Identity = 87/144 (60.42%), Postives = 106/144 (73.61%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDE--ELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKL----PWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 414
GA RVALGT+VP +FCND ++A +L S S DQVWRLPLW GYR Q+ SK+ADLKN+GAG YGGAITAALYL+EFV E + G G E+ PW+H+D MA+NT S+PGRPEGGE+ GMRALY L+E ++GSA
Sbjct: 390 GAGRVALGTDVPALFCNDAGVDVAEQLVAASASEQDQVWRLPLWPGYREQIDSKVADLKNIGAGPYGGAITAALYLNEFV-EAPEDGADGGPGEAAEETAQPPPWLHLDMMAYNTGSKPGRPEGGEAMGMRALYRLIERRWGSA 532
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: A0A7S1U8C6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8C6_9STRA) HSP 1 Score: 173 bits (439), Expect = 7.520e-49 Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFV-----GEKASPSTEEGEGGKKEKLP-WIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGS 411
GA+RVALG +VP VF ND+ELA +L LS V DQVW+LPLW+GYR+QL S IAD+KN+G YGGAITAALYL EFV E+ S EE + K P W+HMD MA+N +RPGRPEGGE+QGMRA +ALLE KY S
Sbjct: 416 GASRVALGADVPSVFSNDDELARELQDLSAGVPDQVWQLPLWKGYRAQLKSNIADMKNIGMS-YGGAITAALYLAEFVKKPAANEEESAGDEEDDAEAAPKAPKWLHMDVMAYNQGTRPGRPEGGEAQGMRAFFALLEKKYAS 557
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: F0YS90_AURAN (CYTOSOL_AP domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YS90_AURAN) HSP 1 Score: 166 bits (420), Expect = 2.080e-48 Identity = 84/137 (61.31%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDE--ELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKY 405
GA RVALGT+VP +F N+E ++A +L +S DQVWRLPLW GYR Q+ SKIADLKN+GAG YGGAITAALYL EFV +A P +GG PW+H+D MA+NT S+PGRPEGGE+ GMRAL+ LLE +Y
Sbjct: 167 GAGRVALGTDVPALFANEEGVDVADELVAVSAGEQDQVWRLPLWPGYREQIDSKIADLKNIGAGPYGGAITAALYLAEFV--EAPP-----DGGAPP--PWLHLDMMAYNTGSKPGRPEGGEAMGMRALFRLLEARY 294
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: L1ITL5_GUITC (CYTOSOL_AP domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ITL5_GUITC) HSP 1 Score: 166 bits (419), Expect = 1.790e-46 Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAG-GYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 414
GA RVALGT+VP VFCN+EEL ++L +LS +D VWRLPL++GY L+S+IAD+KNV G GYGGAITAALYL +FV + T+ W+HMDFMAFNT SRPGRPEGGE+ G+RAL+AL++ KYGS+
Sbjct: 357 GAGRVALGTDVPAVFCNNEELGSELCSLSEKENDLVWRLPLFKGYAKSLASRIADMKNVAEGSGYGGAITAALYLQKFV----TAGTD-----------WVHMDFMAFNTASRPGRPEGGEAMGLRALFALIQSKYGSS 480
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: F0YNB6_AURAN (CYTOSOL_AP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNB6_AURAN) HSP 1 Score: 165 bits (418), Expect = 2.510e-46 Identity = 84/137 (61.31%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDE--ELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKY 405
GA RVALGT+VP +F N+E ++A +L S DQVWRLPLW GYR Q+ SKIADLKN+GAG YGGAITAALYL EFV +A P +GG PW+H+D MA+NT S+PGRPEGGE+ GMRAL+ LLE +Y
Sbjct: 352 GAGRVALGTDVPALFANEEGVDVADELVAASAGEQDQVWRLPLWPGYREQIDSKIADLKNIGAGPYGGAITAALYLAEFV--EAPP-----DGGAPP--PWLHLDMMAYNTGSKPGRPEGGEAMGMRALFRLLEARY 479
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: A0A7S3ZRK0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRK0_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.280e-45 Identity = 81/138 (58.70%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 1 GAARVALGTEVPVVFCNDEELAAK--LHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAGGYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYG 408
GA RVALGT+VP +F NDE +A L S DQVWRLPLW+GYR +++ K+ADLKN+G G YGGAITAALYL EFV P+ E G PW+H+D MAFNT S+PGRPEGGE+ GMRAL+ LLE ++G
Sbjct: 383 GAGRVALGTDVPCLFANDEGVAVADVLVAESAKEQDQVWRLPLWQGYREEINGKVADLKNIGNGPYGGAITAALYLAEFV----EPAAEGGAAP-----PWLHLDMMAFNTGSKPGRPEGGEAMGMRALFRLLEARFG 511
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Match: A0A7S4M0M3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4M0M3_GUITH) HSP 1 Score: 150 bits (380), Expect = 1.170e-44 Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 31 VPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSSKIADLKNVGAG-GYGGAITAALYLDEFVGEKASPSTEEGEGGKKEKLPWIHMDFMAFNTNSRPGRPEGGESQGMRALYALLEDKYGSA 414
VP VFCN EEL A+L +LS +D VWRLPL++GY L+S+IAD+KNV G GYGGAITAALYL +FV + T+ W+HMDFMAFNT SRPGRPEGGE+ G+RAL+AL++ KYGS+
Sbjct: 1 VPAVFCNTEELGAELCSLSVKENDLVWRLPLFKGYAKSLASRIADMKNVAEGSGYGGAITAALYLQKFV----TAGTD-----------WVHMDFMAFNTASRPGRPEGGEAMGLRALFALIQSKYGSS 114 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1262.1618.1 >prot_E-siliculosus-1a_F_contig1262.1618.1 ID=prot_E-siliculosus-1a_F_contig1262.1618.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1618.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=139bp GAARVALGTEVPVVFCNDEELAAKLHTLSGSVSDQVWRLPLWEGYRSQLSback to top mRNA from alignment at E-siliculosus-1a_F_contig1262:274..1858+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1262.1618.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1618.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1618.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1585bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:274..1858+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1262:274..1858+ >mRNA_E-siliculosus-1a_F_contig1262.1618.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1618.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1618.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=834bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:274..1858+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |