mRNA_E-siliculosus-1a_F_contig126.1608.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: D8LBT2_ECTSI (DJ-1_PfpI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBT2_ECTSI) HSP 1 Score: 436 bits (1121), Expect = 9.330e-150 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1
Query: 67 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA 747
MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTA GAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSK DPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA
Sbjct: 1 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTADGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKADPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKASA 227
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A6U0IZP5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IZP5_9STRA) HSP 1 Score: 225 bits (573), Expect = 3.300e-67 Identity = 120/226 (53.10%), Postives = 151/226 (66.81%), Query Frame = 1
Query: 67 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGA-KTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 741
MPKI++V TS+ + +TG WLEE AAP+ F DAGYE++IASP GG P+DAGS +A+LTD ++F D A L+ TTKLS D SA A+FF GGHGTCVDF ++ SV+G +E +YGAG V++AVCHGPT K LV +TGFTDTEE V LT KVPFLLE KL E G F + D W P VDG+++TGQNP SSE A+ +++L A
Sbjct: 1 MPKIIIVSTSAPELAGHKTGLWLEECAAPYYKFKDAGYEIEIASPAGGPVPLDAGSLGEAFLTDACKKFLFDPEAMGMLSHTTKLSAADLSAADAIFFCGGHGTCVDFIDDASVKGAIETLYGAGKVVAAVCHGPTCLPQCTKPGTDEPLVKDLVVTGFTDTEEEAVQLTGKVPFLLEQKLKEQGGKFERADDWNPKVCVDGKLITGQNPQSSEACAEATIKMLSA 226
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A830H344_9CHLO (DJ-1_PfpI domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H344_9CHLO) HSP 1 Score: 215 bits (547), Expect = 2.990e-63 Identity = 117/228 (51.32%), Postives = 151/228 (66.23%), Query Frame = 1
Query: 73 KILLVLTSSKMMG---EKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLT----DKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVL 735
K+LLV TS+ G +K++G W EE A P+ +F DAG V IASP GG P+DAGSKADA++TDYTR+FDADA A A L ++TKLSDVD++ + AV+ AGGH T DFP+N + ++E +Y AG V++A CHGP V K A G LVSG +TGF DTEE VGL D +PF L+ K ELG +F W+ AV G+++TGQNP SSE AQ ++ L
Sbjct: 5 KVLLVCTSASKWGKDQDKDSGAWYEEVACPYYVFKDAGLSVVIASPLGGPIPIDAGSKADAFMTDYTRKFDADADALAVLNSSTKLSDVDAATFDAVYLAGGHATYTDFPDNKELIAIVETLYNAGKVVAADCHGPVGLVNCKKADGTPLVSGLNVTGFLDTEEQAVGLDPVKCDVLPFSLQQKFTELGGNFQAGADWSSNAVSAGKLITGQNPQSSEQVAQAMLTAL 232
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: UPI00146C4373 (type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Pseudonocardia acidicola TaxID=2724939 RepID=UPI00146C4373) HSP 1 Score: 214 bits (544), Expect = 6.460e-63 Identity = 113/224 (50.45%), Postives = 152/224 (67.86%), Query Frame = 1
Query: 73 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 738
KIL+VLTS +G+ TGFWLEE AAP+ +F DAG E+ +ASP GG PP+D S T+ T+RF AD AA+A LA T KL+DV + + AVF+ GGHG D P+N + ++EK AG I AVCH P A V +T GA+ V+GK++TGF+++EEA VGLTD VPFLL+ +LIE G + + + W P+ VDGR+VTGQNP SS AQ+++ +L+
Sbjct: 2 KILMVLTSHDRLGDTGNPTGFWLEEFAAPYYVFADAGAEITLASPAGGQPPLDPKSDEPDAQTEATKRFQADEAAEALLANTVKLADVSAEDFDAVFYPGGHGPMWDLPDNETSIALIEKFLAAGKPIGAVCHAPAALVNVRTQDGASFVAGKRVTGFSNSEEAGVGLTDVVPFLLQDRLIERGGGYGRAEDWAPHVEVDGRLVTGQNPASSAPAAQELLALLR 225
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A7S4I150_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I150_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.360e-62 Identity = 113/224 (50.45%), Postives = 149/224 (66.52%), Query Frame = 1
Query: 67 MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGA-KTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVL 735
M K ++V TS+ + +TG WLEE AAP+ F +AGYE+DIASP GG P+D+GS + +LTD ++F D A L+ T+KLSDVD SA A+FF GGHGTCVDF ++ SV+G +E +YGA V++AVCHGP K + LV G +TGFTDTEE+ V L KVPFLLE KL E G F + D W +DG++VTGQNP SSE A+ V++++
Sbjct: 1 MTKAIIVSTSAPELAGHKTGLWLEECAAPYYKFKEAGYEIDIASPAGGPVPLDSGSLQEMFLTDACKKFLFDPEAMGMLSHTSKLSDVDLSAADAIFFCGGHGTCVDFIDDASVKGAIETLYGADKVVAAVCHGPNCLPQCVKPGSTDPLVKGLTVTGFTDTEESAVQLASKVPFLLEQKLKEQGCIFERADDWNSKVCIDGKLVTGQNPQSSEACAEAVIKII 224
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A2G1MGR6_9RHOB (Type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Limimaricola cinnabarinus TaxID=1125964 RepID=A0A2G1MGR6_9RHOB) HSP 1 Score: 212 bits (539), Expect = 3.790e-62 Identity = 111/226 (49.12%), Postives = 152/226 (67.26%), Query Frame = 1
Query: 67 MPKILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 738
M KIL++LTS +G+ ++TGFWLEE AAP+ +F DAG EV +ASP+GG PP+D S A+ + TD TRRF D AAQ +LA+T +L ++ + Y AVF+ GGHG D NP + ++E G + AVCH P F +T G LV G+K+TGFT+ EE VGLTD VPFLLE L E GA++ K + W P+ V DG++VTGQNP SSE A+K++++++
Sbjct: 1 MTKILMILTSHDRLGDTGEKTGFWLEEFAAPYYVFKDAGVEVTLASPQGGQPPLDPKSDAEDFQTDATRRFKEDKAAQEQLASTERLDEIYPTQYDAVFYPGGHGPMWDLAENPDSRRIIETFVTEGRPLGAVCHAPAVFRHTQTEDGKPLVEGRKLTGFTNGEEEGVGLTDVVPFLLEDMLKEKGAEYQKGEDWAPFVVTDGKLVTGQNPASSEEAAKKLLDLVE 226
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A2S0IP02_9GAMM (Type 1 glutamine amidotransferase domain-containing protein n=4 Tax=Idiomarinaceae TaxID=267893 RepID=A0A2S0IP02_9GAMM) HSP 1 Score: 211 bits (537), Expect = 7.750e-62 Identity = 111/225 (49.33%), Postives = 153/225 (68.00%), Query Frame = 1
Query: 73 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 741
KIL+VLTS +G+ +TGFW+EE AAP+ +FTDAG EV IASP+GG PP+D S A+ T+ TRRFD D +AQ KLA + KL +++ + A+F+ GGHG D N+ ++E+ + G ++AVCH P + AKT AG +V G+ +TGF+++EE VGLT VPFLLE L E G + KVD W YAV DG ++TGQNP SSE TA+++++VL+A
Sbjct: 2 KILMVLTSHDELGDTGNKTGFWVEEFAAPYYVFTDAGAEVTIASPKGGQPPIDPNSAAEDAQTEATRRFDNDESAQQKLATSCKLDEINVDDFDAIFYPGGHGPLWDLTNDEHSIHLIEQFWSKGKPVAAVCHAPAVLLNAKTPAGDPIVQGRTVTGFSNSEEEAVGLTSVVPFLLEDALGEKGGHYRKVDDWQAYAVQDGMLITGQNPASSEQTAERLLDVLRA 226
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A259L1Q6_9GAMM (Type 1 glutamine amidotransferase domain-containing protein n=3 Tax=Idiomarinaceae TaxID=267893 RepID=A0A259L1Q6_9GAMM) HSP 1 Score: 211 bits (536), Expect = 1.020e-61 Identity = 114/225 (50.67%), Postives = 152/225 (67.56%), Query Frame = 1
Query: 73 KILLVLTSSKMMGEK--ETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKA 741
KIL+VLTS + +G+ +TGFW EE AAP+ F DAG EV +ASP+GG PP+D S+ T+ T R D AA +LA T KLSDV + + A+F+ GGHG D +P G++++ + ++AVCH P V AKT AG LV G+K++GFT++EEA VGLTD VPFLLE KL ELG + KVD W PYAVVDG ++TGQNP SSE A+++++ LK+
Sbjct: 2 KILMVLTSHEQLGDSGHKTGFWAEEFAAPYYAFKDAGAEVVLASPKGGQPPIDPNSEQADAQTNATVRLFEDEAAMTQLANTLKLSDVTADEFDAIFYPGGHGPLWDLSQDPLSIGLIQQFWEQEKPVAAVCHAPAVLVNAKTPAGEPLVKGRKVSGFTNSEEAAVGLTDVVPFLLEDKLKELGGLYEKVDDWKPYAVVDGNLITGQNPASSEAVAEQLLKKLKS 226
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: A0A8J3KFY5_9ACTN (Dimethylallyltransferase n=4 Tax=Catellatospora TaxID=53365 RepID=A0A8J3KFY5_9ACTN) HSP 1 Score: 211 bits (536), Expect = 1.120e-61 Identity = 110/224 (49.11%), Postives = 149/224 (66.52%), Query Frame = 1
Query: 73 KILLVLTSSKMMGE--KETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLK 738
K+L+V+TS +G+ ++TGFWLEE AAP+ F DAG++V +ASP GG PP+D S + TD TRRF+ADA A+A+L T +L V + + VF+ GGHG D +P+ ++E+V +G I+ VCH P A KT G LV+G+K+TGFTDTEE VGLT VPFL+E +L+ GA FSK D W PY V DGR+VTGQNP SS A K++ +++
Sbjct: 2 KVLMVITSHDQLGDTGRKTGFWLEELAAPYYRFRDAGWDVTLASPRGGRPPLDPKSNEPDFQTDLTRRFEADADAEAQLDTTLRLDSVSADDFDTVFYPGGHGPMWDLAEDPTSIALIEQVVRSGKAIALVCHAPGALRHVKTPEGTPLVAGRKVTGFTDTEEEAVGLTKVVPFLVEDELVAKGAHFSKADDWQPYVVTDGRLVTGQNPASSGPAADKLISLVQ 225
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Match: UPI0012659862 (type 1 glutamine amidotransferase domain-containing protein n=1 Tax=Marinobacter changyiensis TaxID=2604091 RepID=UPI0012659862) HSP 1 Score: 210 bits (535), Expect = 1.480e-61 Identity = 112/226 (49.56%), Postives = 150/226 (66.37%), Query Frame = 1
Query: 73 KILLVLTSSKMMGEK--ETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPPVDAGSKADAYLTDYTRRFDADAAAQAKLAATTKLSDVDSSAYAAVFFAGGHGTCVDFPNNPSVQGVMEKVYGAGGVISAVCHGPTAFVGAKTAAGAALVSGKKMTGFTDTEEAQVGLTDKVPFLLEAKLIELGADFSKVDPWTPYAVVDGRVVTGQNPMSSELTAQKVVEVLKAS 744
K+L+VLTS +G+ +TGFWLEE AP+ +F DAG ++ +ASP+GG PPVD S+A+ LT TRRF+ DA A+ LA+T KL+DVD S + A+F+ GGHG D NN +++ Y VI AVCH P F + G +V G+K+TGF+++EE VGLT+ VPFLLE L E A +SK D W PY VVDG+++TGQNP SSE A+ VV+ L+ S
Sbjct: 2 KVLMVLTSHDQLGDSGNKTGFWLEEFTAPYYVFKDAGADITLASPKGGQPPVDPASEAEEALTATTRRFEEDAHAKESLASTKKLADVDMSQFDAIFYPGGHGPMWDLANNEKSIALIKTAYEQDKVICAVCHAPAVFRNVEVKPGQNIVGGRKVTGFSNSEEEAVGLTNIVPFLLEDMLKENAATYSKGDDWAPYIVVDGKLITGQNPASSEGAAKAVVQALQES 227 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig126.1608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig126.1608.1 >prot_E-siliculosus-1a_F_contig126.1608.1 ID=prot_E-siliculosus-1a_F_contig126.1608.1|Name=mRNA_E-siliculosus-1a_F_contig126.1608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=228bp MPKILLVLTSSKMMGEKETGFWLEEAAAPHAIFTDAGYEVDIASPEGGAPback to top mRNA from alignment at E-siliculosus-1a_F_contig126:73556..77976+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig126.1608.1 ID=mRNA_E-siliculosus-1a_F_contig126.1608.1|Name=mRNA_E-siliculosus-1a_F_contig126.1608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4421bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:73556..77976+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig126:73556..77976+ >mRNA_E-siliculosus-1a_F_contig126.1608.1 ID=mRNA_E-siliculosus-1a_F_contig126.1608.1|Name=mRNA_E-siliculosus-1a_F_contig126.1608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1368bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig126:73556..77976+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |