mRNA_E-siliculosus-1a_F_contig1259.1595.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 1.390e-188 Identity = 261/298 (87.58%), Postives = 276/298 (92.62%), Query Frame = 3
Query: 345 MARPPSRRAGGRSW*RGKTKLRMRQLLELVMIMVLMEEDDAPETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
MAR P+ R RSW RGKTK RMRQLLEL+MIMVLM+E D P+TR FV RERRSWYTY KPMV+DGTFRLRFRMDYTEFA LADMLRPKLE++E+MGALRNGVIPVEFQLAMALRFLAGGS+FEVMDGNVIARSTAYA+VHRVIDAINQTRELDCVWPEG+DALDQCGMYR+RSTNGVIRMCVGAMDGLFVR+TQPSLRRHVNPR+FYSGHKK FGMNFQGVCNARYEI AWTMNCPGSCNDRTAFKHS FG VL LPPG YIVGDAAYPASD+VLVPYPGTSLT SQDAYNFYQS
Sbjct: 1 MARAPASR---RSWLRGKTKKRMRQLLELLMIMVLMDEGDPPQTRDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQS 295
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 2.600e-149 Identity = 216/299 (72.24%), Postives = 240/299 (80.27%), Query Frame = 3
Query: 345 MARPPSRRAGGRSW*RG-KTKLRMRQLLELVMIMVLMEEDDAPETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
MARPP A S+ RG K DAP RG+FVYRERRS+YTYV+PMVED TFR RFRMDYT+F LAD+LRPKL++DEKMGALRNG IPVEFQLAM LRFLAGGS+FEVMD NVIA+STAYA+VHRVIDAINQTR+L+C WP GDDA Q +YR+RSTNGVIR CVGAMDGLFVRL P L+RH P +FYSGHKKAFGMNFQG+CNA YEI WTMNCPGS NDRTAFKHSGF +L+K+PP C+IVGDAAYPAS+RVLVP PGT+LTLSQDAYNFYQS
Sbjct: 1 MARPPRSHARRSSYKRGQKXXXXXXXXXXXXXXXXXXXXSDAPAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQS 299
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 328 bits (841), Expect = 6.040e-107 Identity = 151/179 (84.36%), Postives = 162/179 (90.50%), Query Frame = 3
Query: 702 GGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
GGSIFEVMDG V A+STAYA+V+RVIDAINQTRE DCVWPEGDDALDQCG+YRQRSTN VI MCVGAMDGLFV + +PSLRRHVNPR FYSGHKK FGMNFQ VCNARY+ITAWTMNCPGSCNDRTAFKHSGF +VL LP G YIVGD AYPASD+VLVPYPGT+LT SQD+YNFYQS
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQS 229
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.070e-87 Identity = 134/216 (62.04%), Postives = 165/216 (76.39%), Query Frame = 3
Query: 591 LADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
L D LRP L+K+++MG LRNG IPVE Q+AM LR+LAGGSI+E MDG+VIARSTAY V VI+A+N EL+C WPEG+DA ++R RS+ V+R CVGA DGLFVR+ +PS + P +Y+GHKK FGMNFQ VC+A+Y I AW MNCPGS NDRTAF SGF K+L LP G ++VGDAAY AS+RV+VP+PGTSL+ SQDA N+Y S
Sbjct: 73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVS 288
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 266 bits (680), Expect = 4.000e-82 Identity = 148/292 (50.68%), Postives = 188/292 (64.38%), Query Frame = 3
Query: 345 MARPPSRRAGGRSW*RGKTKLRMRQLLELVMIMVLMEEDDAP--ETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQ 1214
MA P+RRA TK R+ LL+ + I+ + DAP R V RERR + TY+KPM++D TF +RFRM+Y +F L D LRP L+++EK G LRNG IPVE+Q+AM LR+LAGGSI+E MDG+VIARSTAY V VI+A+N EL+C WPEG+D + + V+R CVGAMDGLFVR+ +PS + P +Y+GHKK FGMNFQ VC S NDRTAF SGF K+L LP G ++VG+AAY AS+RV+VP+PGTS Q
Sbjct: 1 MAVSPTRRAKRAHRLASVTK-RVSSLLDALAILDNLSALDAPTKRNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPXEQ 275
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.630e-60 Identity = 124/279 (44.44%), Postives = 160/279 (57.35%), Query Frame = 3
Query: 408 RMRQLLELVMIMVLMEEDDAP--ETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
R+ LL+ + I+ + DAP R V RERR + T++KP+++D TF +RFRM+Y +F L D LRP L K+EKMG LR G IPVE+Q+AM LR+LAGGSI+E MDG+VIARSTAY V VI+A+N EL+C WPE +D V+R CVGAMDGLFVR+ +PS + P +Y+GH+K GV +VGDAAY AS+RV+VP+PGTSL+ SQDA N Y S
Sbjct: 21 RVSSLLDALAILGNLSALDAPTKRNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEA--RMD------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRK-------GV-----------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVS 237
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 201 bits (512), Expect = 8.560e-58 Identity = 125/300 (41.67%), Postives = 156/300 (52.00%), Query Frame = 3
Query: 345 MARPPSRRAGGRSW*RGKTKLRMRQLLELVMIMVLMEEDDAPE--TRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVWPEGDDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
MA P+RRA TK R+ LL+ + I+ + D P +R V R RR + TY+KPM++D TF +RFRM+Y +F L D LRP L+K+EKMG LRNG IPVE+Q+AM LR+LAGGS +E MDG+VIARSTAY VC+A+Y I AW MNCPGS NDRTAF SGF K+L LP G ++VGDAAY AS+RV+VP+PGTSL+ SQDA N+Y S
Sbjct: 1 MAVSPTRRAKRAHRLASVTK-RVSSLLDALAILDNLSALDPPSMRSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY----------------------------------------------------------------------------------HAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMS 217
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE) HSP 1 Score: 185 bits (470), Expect = 4.800e-51 Identity = 103/277 (37.18%), Postives = 154/277 (55.60%), Query Frame = 3
Query: 420 LLELVMIMVLMEEDDAPETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGA--LRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELDCVW-PEG-DDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
+L L ++ + + AP+ R R W +V+ + G FR +RM+ F LA++LRP LE ++ R+G +PV+ +LA+ALR LAG S +V IA+ T + V+ V+DAIN T E+ + P+ DD Q + +ST GV CV A DGLFV+ PS N +++SG+K +G+N Q C+A Y + + G+ ND TA+ S + +LPPG Y++GDAAYP SD +L PYPG L +D++NF+ S
Sbjct: 42 VLVLTVVTTTVVQSFAPKARLPIHEPRRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLS 318
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.260e-49 Identity = 103/277 (37.18%), Postives = 155/277 (55.96%), Query Frame = 3
Query: 420 LLELVMIMVLMEEDDAPETRGDFVYRERRSWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGALR--NGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELD-CVWPEG-DDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
+L L ++ + + AP+ R R W +VK + FR +RM+ F LA++LRP LE+++ LR +G +PV+ +LA+ALR AG S +V IA+ + + V+ +V+DAIN T + +P+ ++ Q + +ST G CV A DGLFV+ P++ N +F+SGHK +G+N Q C+A Y + + GS ND TA+ S + +LPPG Y++GDAAYP SD++L PYPG L QDA+NFY S
Sbjct: 41 VLLLTVVTSTVTQRFAPKARQPIHEPRRLDWEEHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLS 317
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE) HSP 1 Score: 180 bits (456), Expect = 2.050e-48 Identity = 102/255 (40.00%), Postives = 148/255 (58.04%), Query Frame = 3
Query: 489 VYRERR-SWYTYVKPMVEDGTFRLRFRMDYTEFADLADMLRPKLEKDEKMGA--LRNGVIPVEFQLAMALRFLAGGSIFEVMDGNVIARSTAYAVVHRVIDAINQTRELD-CVWPEG-DDALDQCGMYRQRSTNGVIRMCVGAMDGLFVRLTQPSLRRHVNPRAFYSGHKKAFGMNFQGVCNARYEITAWTMNCPGSCNDRTAFKHSGFGKVLNKLPPGCYIVGDAAYPASDRVLVPYPGTSLTLSQDAYNFYQS 1238
V+ RR W +V+ + FR +RM+ F LAD+LRP LE+++ R+G +PV+ +LA+ALR LAG S +V IA+ T + V+ V+DAIN T E+ +P+ ++ Q + +ST G I CV A DGLFV+ PS N +++SG+K +G+N Q C+A Y + + G+ ND TA+ S + + +LPPG Y++GDAAYP SD++L PYPG L QDAYNFY S
Sbjct: 66 VHEPRRLDWDEHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLS 320 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1259.1595.1 >prot_E-siliculosus-1a_F_contig1259.1595.1 ID=prot_E-siliculosus-1a_F_contig1259.1595.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=277bp MRQLLELVMIMVLMEEDDAPETRGDFVYRERRSWYTYVKPMVEDGTFRLRback to top mRNA from alignment at E-siliculosus-1a_F_contig1259:17339..18969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1259.1595.1 ID=mRNA_E-siliculosus-1a_F_contig1259.1595.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1631bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1259:17339..18969+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1259:17339..18969+ >mRNA_E-siliculosus-1a_F_contig1259.1595.1 ID=mRNA_E-siliculosus-1a_F_contig1259.1595.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1595.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1662bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1259:17339..18969+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |