mRNA_E-siliculosus-1a_F_contig1259.1594.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 5.430e-14 Identity = 80/231 (34.63%), Postives = 107/231 (46.32%), Query Frame = 1
Query: 544 EDSRLVLIPLVDTASQGPRFVIEVLLDASIDINTHCTHNSSTTLHYAAREGHHRIVAALLHMGVDKDTLDAAGQTPLIVAASRGLLPVVKTLLNADAGVHLPR--TNDKNY---------HSSPLRCHWRNDGTVAALLD-GGADMNASALPAKPHPFWQPAMATA-PS*ETLLEAGAGVNIRFAWRSTS-LRRSTALHFAARSGHNWAVNALLRGGAETDATGTYGHTPL 1194
E + PL+ A G V+E LLD D + ST++ AA G++ IV ALL+ G DKD+ A G+TPL+ A+ +G LPVVKTLLNADA V L D++Y H + H G V ALL GG +++A M + P ETLL AGA +IR TA H G L+ GA+ ++ +G TPL
Sbjct: 81 EQDQFGYTPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFATAGGHL---GVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPL 308
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: A0A2K3CTM6_CHLRE (HET domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CTM6_CHLRE) HSP 1 Score: 60.8 bits (146), Expect = 4.240e-6 Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 568 PLVDTASQGPRFVIEVLLDASIDINTHCTHNS-STTLHYAAREGHHRIVAALLHMGVDKDTLDAAGQTPLIVAASRGLLPVVKTLLNADAGVHLPRTNDKNYHSSPLRCHWRNDGTVAALLDGGADMNASAL 960
PL+ G V+ VLL+A + + +T LH AA G +V ALL G + DAAG TPL VAA G LPVV+ LL G + + N ++PL ++ AAL GA++ A L
Sbjct: 607 PLLMAVCAGHVEVVHVLLEAGAAVQVCLSEEERNTALHVAAARGDPAVVQALLAAGANIGARDAAGCTPLSVAAREGHLPVVELLLATSGGKDVDAKD--NAGNTPLHHSAIHEDVAAALQAAGANVAARNL 736
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: A0A4Y8CVW4_9HELO (NACHT domain-containing protein n=15 Tax=Sclerotiniaceae TaxID=28983 RepID=A0A4Y8CVW4_9HELO) HSP 1 Score: 59.7 bits (143), Expect = 8.820e-6 Identity = 60/206 (29.13%), Postives = 85/206 (41.26%), Query Frame = 1
Query: 682 AAREGHHRIVAALLHMGVDKDTLDAAGQTPLIVAASRGLLPVVKTLLNADAG--------------------------VHLPRTNDKNYHSSPLRCHWRNDGTVAALLDGGADMNASALPAKPHPFWQPAMATAPS*ETLLEAGAGVNIRFAWRSTSLRRSTALHFAARSGHNWAVNALLRGGAETDA-TGTYGHTPLVAAGHEGH 1218
AA G IV LL G D +T+ TPL++AA G PVV+ L+N+ A + +P + N + + RN+G + AL++ GAD+NAS + P + + P L +R + AL AA +G+ A+ LL GAE DA TY T LV A GH
Sbjct: 680 AAMFGLPTIVGKLLKTGADIETVCPKDFTPLLIAAELGHSPVVQILINSKANLLAKDYQQENALHKAARKGHVEIPSLIEIPFGENFNKTALHIAIDRRNEGVIRALIEAGADVNASDELSL-TPLMKSVVDNLPDTIDLXXXXXXXXXXXGFREHA-----ALSMAATAGNIVAIKKLLAAGAEVDAGKDTYSGTALVRAASSGH 879
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: H2UME2_TAKRU (Uncharacterized protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=H2UME2_TAKRU) HSP 1 Score: 59.3 bits (142), Expect = 1.190e-5 Identity = 52/168 (30.95%), Postives = 78/168 (46.43%), Query Frame = 1
Query: 532 SHG----IEDSRLVLIPLVDTASQGPRFVIEVLLD-ASIDINTHCTHNSSTTLHYAAREGHHRIVAALLHMGVDKDTLD---AAGQTPLIVAASRGLLPVVKTLLNADAGVHLPRTNDKNYHSSPLRCHWRNDGTVAALLDGGADMNASALPAKPHPFWQPAMATAPS 1011
SHG + D+RL PL+ A G +EVL++ A +D+ H + T LH A +GH +L D++ ++ AA QTPL VAA RGL VV+ LL +A V N +N +++ L + AS PA + PA++ P+
Sbjct: 841 SHGAQANVADTRLCRTPLMMAALNGQTNTVEVLVNSAKVDLTLQDAHRN-TALHLACSKGHETCALLILEKIGDRNLINCTNAALQTPLHVAARRGLTVVVQELLGKEASVLAVDENGENENAAGLSXXXXXXXXXXXXXSPASCFTASLCPAG----YTPALSCTPN 1003
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: A0A4Z2BL08_9TELE (Uncharacterized protein n=3 Tax=Takifugu TaxID=31032 RepID=A0A4Z2BL08_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 1.190e-5 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 532 SHG----IEDSRLVLIPLVDTASQGPRFVIEVLLD-ASIDINTHCTHNSSTTLHYAAREGHHRIVAALLHMGVDKDTLD---AAGQTPLIVAASRGLLPVVKTLLNADAGVHLPRTNDKNYHS---SPLRCHWR 900
SHG + D+RL PL+ A G +EVL++ A +D+ H + T LH A +GH +L D++ ++ AA QTPL VAA RGL VV+ LL +A V N +N ++ SP C R
Sbjct: 884 SHGAQANVADTRLCRTPLMMAALNGQTNTVEVLVNSAKVDLTLQDAHRN-TALHLACSKGHETCALLILEKISDRNLINCTNAALQTPLHVAARRGLTVVVQELLGKEASVLAVDENGENENAAGLSPPSCFTR 1016
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: D7FK36_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK36_ECTSI) HSP 1 Score: 57.8 bits (138), Expect = 3.350e-5 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 673 LHYAAREGHHRIVAALLHMGVDKDTLDAAGQTPLIVAASRGLLPVVKTLLNADAGVHLPRT-NDKNYHSSPLRCHWRND--GTVAALLDGGADMNAS 954
LH A R G V+ LL G D +LD +G++PL++A G LPVV+ LL+ DAG T N N S+ ++ R + G + AL+ GAD+ A+
Sbjct: 69 LHSAVRRGEADAVSKLLSEGADAASLDGSGRSPLLLATQEGHLPVVRVLLDGDAGDAACITPNGPNGMSALVKSAARKEHLGILRALIARGADVEAT 165
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Match: Q8AX92_TAKRU (Uncharacterized protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=Q8AX92_TAKRU) HSP 1 Score: 57.8 bits (138), Expect = 3.680e-5 Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 532 SHG----IEDSRLVLIPLVDTASQGPRFVIEVLLD-ASIDINTHCTHNSSTTLHYAAREGHHRIVAALLHMGVDKDTLD---AAGQTPLIVAASRGLLPVVKTLLNADAGVHLPRTNDKNYHSSPLRC 891
SHG + D+RL PL+ A G +EVL++ A +D+ H + T LH A +GH +L D++ ++ AA QTPL VAA RGL VV+ LL +A V D+N ++ L C
Sbjct: 965 SHGAQANVADTRLCRTPLMMAALNGQTNTVEVLVNSAKVDLTLQDAHRN-TALHLACSKGHETCALLILEKIGDRNLINCTNAALQTPLHVAARRGLTVVVQELLGKEASV---LAVDENGYTPALSC 1088 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1259.1594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1259.1594.1 >prot_E-siliculosus-1a_F_contig1259.1594.1 ID=prot_E-siliculosus-1a_F_contig1259.1594.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1594.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=168bp MQRHVPESHGIEDSRLVLIPLVDTASQGPRFVIEVLLDASIDINTHCTHNback to top mRNA from alignment at E-siliculosus-1a_F_contig1259:6288..8740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1259.1594.1 ID=mRNA_E-siliculosus-1a_F_contig1259.1594.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1594.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2453bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1259:6288..8740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1259:6288..8740+ >mRNA_E-siliculosus-1a_F_contig1259.1594.1 ID=mRNA_E-siliculosus-1a_F_contig1259.1594.1|Name=mRNA_E-siliculosus-1a_F_contig1259.1594.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1008bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1259:6288..8740+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |