mRNA_E-siliculosus-1a_F_contig125.1557.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI) HSP 1 Score: 220 bits (561), Expect = 2.330e-64 Identity = 138/249 (55.42%), Postives = 141/249 (56.63%), Query Frame = 1
Query: 511 MEQSDPCSPGGCSAGGDAAGEGGGFGGAPAPPCGFGWGARAAAAVAAAG-PATDETRKATSKGEKESSPPQPKRVVGRVSVEPLREELDFEGRTAQLTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRRPQDHGRGEGASWRP 1254
ME+SDPCS GGCSA DAAGEGGGFGGAP PPCG GWGARAA PATDETRKAT+K EKESSPPQPKRVVGRVSVE LRE AGPNGRVYG VQCPSMK+LWPEVYSAAAVRVVQVDLRVEI SRSGDFLHLDSELKVIYRRPQDHG EGASWRP
Sbjct: 1 MEKSDPCSSGGCSAXXDAAGEGGGFGGAPMPPCGVGWGARAAXXXXXXXXPATDETRKATNKREKESSPPQPKRVVGRVSVETLRE-----------------------------------------------------------------------------------------AGPNGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKVIYRRPQDHGSSEGASWRP 160
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 207 bits (528), Expect = 4.330e-56 Identity = 163/378 (43.12%), Postives = 202/378 (53.44%), Query Frame = 1
Query: 190 WWNIDLCDEEGDADNALAAMEVDRQTFSVSP-----------LTVGPSLLPRAQSIDVHAVLFPSTAGGRSPTKLSPLEVKAPASSCRRSACG--------VTHNDLNGSAPIPLPSSSTSDSG--PVMEQSDPCSPGGCSAGGDAAGEGGGFGGAPAPPCGFGWGAR--AAAAVAAAGPATDETRKATSKGEKESSPPQPKRVVGRVSVEPLREELDFEGRTAQLTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRRPQDHGRGEGASWRP 1254
WW++DL D GD+ A + +V+P L++ PSL P + D V ST KLSPL V+AP ++ R C V +D + +P SSS G P + + P AG G GG PAP CG G GA A AA +A+G + E R EKESS K V V +E LRE+ DFEGRT + KP+ SPFA A +P SDD EQYLVF GL ETG+PL L AR FS N R+A+R+VG LQAR AG NGRVYGAVQ PSM ELWPEVY++ A+RVV+VD+ VE+ SRSGD L+L +EL +YRRP R +GA WRP
Sbjct: 83 WWDVDLGDGGGDS-TKKGARGGNLSPLTVTPPXXXXXXXXXXLSLPPSLSPVRRMSDAGVVRVASTTL-MGDLKLSPLTVQAPPNNRHRQRCELYAAKRPVVEVHDSSIVSPAGSSSSSNKIGGEDPNVMRQPPWREDDWLAGDLLGGVRGGGVKVPAPLCGPGLGASETAPAAASASGVSKKEQR------EKESSRRASKPTVDNVFIESLREDFDFEGRTIEPNKPSGSPFAAALSVPRSDD-------EQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQAR---------AGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRRPSGGSRNQGALWRP 436
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 177 bits (448), Expect = 8.640e-46 Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 754 PLREELDFEGRTAQLTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRRPQDHGRGEGASWRP 1254
P+ E+ DFEGRT + KP++SPFA AF +P SDD EQ+LVF GL ETG+PL TL AR FS N R+A+R+VG LQA G NGRVYGAVQ PSM ELWPEVY++ A+RVV+VD+ VE+ SR GD L+L +ELK +YRRP R +GA WRP
Sbjct: 204 PVVEDFDFEGRTIEPNKPSDSPFAAAFSVPRSDD-------EQHLVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQA-----------GSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPPGGSRNQGALWRP 352
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI) HSP 1 Score: 180 bits (456), Expect = 1.280e-44 Identity = 150/365 (41.10%), Postives = 193/365 (52.88%), Query Frame = 1
Query: 193 WNIDLCDEEGDADNALAAMEVDRQTFSVSPLTVGPSLLP---RAQSIDVHAVLFPSTAGGRSPTKLSPLEVKAPASSCR-RSACGVTHNDLNGSAPIPLPSSSTSDSGPVMEQSDPCSPGGCSAGGDAA-----GEGGGFGGAPAPPCGFGWG-ARAAAAVAAAGPATDETRKATSKGEKESSPPQPKRVVGRVSVEPLREELDFEGRTAQLTKP-NESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRRPQDHGRGEGASWRP 1254
WN+ + DA + LA + + ++SPL V P P RA + V P+ T +SPL V+AP ++ R RS G+ + + LP+ + P P S GC D A GEG A A P G G G + +++VAA+ T + K S+ ES+ ++VE LREE DF+GR+ Q P +SPFA F +PCSD+ QYL FTGL TGQPLR LTARV FSVN+ER A+ VVG LQA G NGRVYGA++ PSM ELWPE+ S +AVRVVQVD V+I SR GDFL L + KV YR+ Q H +GASW P
Sbjct: 293 WNLKM---GNDARDDLAGLWGGGGSNNLSPLIVAPPRSPFRRRASDTALDRVAGPALTK----TAVSPLTVQAPPAARRTRSEDGLKDSTSESDLSLLLPNRNR----PEQTHRAPWS--GCDEDHDTAMKWEMGEGDVGSDASAAPRGCGNGLSDNSSSVAASARETGDREKGPSERRAESA-------ANVIAVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDE-------AQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQA-----------GGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWGP 619
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: A0A6H5JPU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.150e-26 Identity = 140/389 (35.99%), Postives = 186/389 (47.81%), Query Frame = 1
Query: 52 MEQSSWAYGEDT-----ASRLSREVAGGGSFRSINGNTTPGDEP-VGDDTGVWWNIDLCDEEGDADNALAAMEVDRQTFSVSPLTVGPSLLP---RAQSIDVHAVLFPSTAGGRSPTKLSPLEVKAPASSCR-RSACGVTHNDLNGSAPIPLPSSSTSDSGPVMEQSDPCSPGGCSAGGDAA-----GEGGGFGGAPAPPCGFGWG-ARAAAAVAAAGPATDETRKATSKGEKESSPPQPKRVVGRVSVEPLRE--------ELDFEGRTAQ---LTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVD 1137
M+ S W +T + RE GG S ++ +T D+ D+ WN+ + DA + LA++ + ++SPL V P P RA + V P+ +SPL V+AP ++ R RSA G+ + + LP+ + P P S G D A GEGG A A P G+G G AAVAA+ T E K S+ ES+ + ++VE LRE E DF+GR+ Q L K +SPFA F +PCSD+ EQYL FTGL TGQPLR LTARV FSVN+E A+ V AG NGRVYGA++ PSM ELWPE+ +AVRVVQV+
Sbjct: 276 MDLSRWVPANETNGGKGVAEEDRESRGGPS--ALKSSTVTIDQGHAADEAESGWNLKM---GNDARDELASLWEGGGSNNLSPLIVAPPRSPFRRRASDTALERVAGPALTKAA----VSPLTVQAPPTARRTRSAEGLKGSTSESDLRLLLPNRNR----PEQTHRAPWS--GRDKDHDIAMKFDIGEGGVRSDASAAPRGYGNGLGDKGAAVAASARETGEREKGPSERRAESA-------INVITVESLREVRTSRRKQEFDFDGRSYQPDNLAK--DSPFASVFSVPCSDE-------EQYLAFTGLGHTGQPLRMLTARVQFSVNSEHTAESV----------------AGGNGRVYGALRYPSMSELWPEICRTSAVRVVQVE 617
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 108 bits (269), Expect = 8.590e-21 Identity = 73/188 (38.83%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 739 RVSVEPLREELDFEGRTAQLTKPN--ESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRRPQDHGRGEGASWRP*SAHKFCSSRRVNP 1296
+V +EP R E DFEGR T P E P +P S DR+ +LVFTGL TGQ LR+L F V++ + +V +Q G NGR Y V PSM+E+WPE+YS + +RVV+VDL VEI S SG++ ++ +LKV Y R A+ RP A + +SR P
Sbjct: 374 KVVIEPSRNECDFEGRPTPPTDPKSGEPP------IPSS------TDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQL-----------GSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPADAAEATPRP--AGRRTASRAPIP 536
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: A0A6H5L4C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C2_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.830e-14 Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 874 REQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEI 1152
REQ+LVFT L+ G L LT V FS+ A +R G +Q RK +GRVY AV+CPS+ ELWPE+Y+ ++RVVQVD+ V +
Sbjct: 30 REQHLVFTELDGAGPHLAHLTPTVHFSITAGHSLERAGGPMQVRK-----------DGRVYVAVKCPSISELWPEIYNNRSIRVVQVDVYVTV 111
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 4.020e-14 Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 733 VGRVSVEPLREELDFEGRTAQLTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRS-GDFLHLDSELKVIYRR---PQDHG 1227
+G V VE R+E D EGR + +P + S D RE ++ FTGLE+TG LR L F V+A + V ++ GP+GR Y V P M+E+WPE+Y+ + +R+V+VD+ +EI S + G+F + LKV YRR P D G
Sbjct: 104 MGDVVVEVSRKECDLEGRPITRIGNSLTPITAS-----SPDV-----RESHIEFTGLEKTGHDLRGLRVTAIFGVDAVHQIACVTSPIEV-----------GPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVDDG 251
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.020e-8 Identity = 50/159 (31.45%), Postives = 73/159 (45.91%), Query Frame = 1
Query: 736 GRVSVEPLREELDFEGRTAQLTKPNESPFAEAFCMPCSDDEGHDQDREQYLVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGPNGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRR 1212
G V+ LR+E DF+GR+A + A A + S + L F G+E +R L FSV G L P G + PSM+++WPEVYSA +V+VV+VD+ V++ S G ++H +KV+YRR
Sbjct: 426 GNVAFGLLRQECDFDGRSAAAVPAASATSASANGVCASSS----TKKPCRLRFKGIEGVDYGIRDLAVTAQFSVGPP-------GNLVGTAPTNLEADRNACAGSSSCTITYPSMEDIWPEVYSARSVKVVEVDMTVDVRSSDGKWVHSWPSVKVMYRR 573
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 2.520e-6 Identity = 39/116 (33.62%), Postives = 53/116 (45.69%), Query Frame = 1
Query: 886 LVFTGLEETGQPLRTLTARVSFSVNAERRAQRVVGELQARKPAFQPLFWAGP-------NGRVYGAVQCPSMKELWPEVYSAAAVRVVQVDLRVEIPSRSGDFLHLDSELKVIYRR 1212
F GLE +R T FSV+ R +R P GRV AV+ PS+ E+WPEVY +RV++VD+ VE+ S G+ L+ LK+ YRR
Sbjct: 511 FAFLGLESE---IRDFTVCARFSVDPASRVERFASLPLDGAAGXXXXXXXDPAGAVGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSDGNILYTGPTLKITYRR 623 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig125.1557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig125.1557.1 >prot_E-siliculosus-1a_F_contig125.1557.1 ID=prot_E-siliculosus-1a_F_contig125.1557.1|Name=mRNA_E-siliculosus-1a_F_contig125.1557.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=419bp MSSTTRPTPDVLHDRGWMEQSSWAYGEDTASRLSREVAGGGSFRSINGNTback to top mRNA from alignment at E-siliculosus-1a_F_contig125:71205..78369- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig125.1557.1 ID=mRNA_E-siliculosus-1a_F_contig125.1557.1|Name=mRNA_E-siliculosus-1a_F_contig125.1557.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7165bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig125:71205..78369- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig125:71205..78369- >mRNA_E-siliculosus-1a_F_contig125.1557.1 ID=mRNA_E-siliculosus-1a_F_contig125.1557.1|Name=mRNA_E-siliculosus-1a_F_contig125.1557.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2514bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig125:71205..78369- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |