mRNA_E-siliculosus-1a_F_contig12476.1540.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: D1J783_ECTSI (Uncharacterized protein Escp124 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J783_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 1.570e-151 Identity = 217/219 (99.09%), Postives = 219/219 (100.00%), Query Frame = 1
Query: 1 MIETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRKGD 657
MIETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIR+TITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDK+RKGD
Sbjct: 1 MIETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRATITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKRRKGD 219
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A5A4MJ83_9PHAE (Uncharacterized protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ83_9PHAE) HSP 1 Score: 333 bits (853), Expect = 1.150e-113 Identity = 151/215 (70.23%), Postives = 192/215 (89.30%), Query Frame = 1
Query: 7 ETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
E +++L +Y LEI +L+ F+ IAFILEQKF F KP++WF AFNAL+F R FSA+AY VPYLDMINLHIPLLKD++PLVLR+F+P+F+ADSID++QQIPFLTF+Y+S+GYG FIRYKIP DRF+RYN+MYSIML+SLQGI+N+MF+ F +T I+D ++RS +TL++FF WL+LYIPCF+R+F GKYD N+FIREAVEVHLGRDGPDFIWWD++RK
Sbjct: 3 EAIRVLLGLYWLEIVILVLFLVIAFILEQKFNFKKPRQWFFAFNALIFTRSFSAIAYAVPYLDMINLHIPLLKDDHPLVLRLFMPNFIADSIDVIQQIPFLTFIYLSIGYGFFIRYKIPGDRFVRYNIMYSIMLVSLQGILNEMFLAFTDTFIVDDYLRSQVTLMAFFCWLSLYIPCFVRAFLGKYDRNEFIREAVEVHLGRDGPDFIWWDRERK 217
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A1I9LVT6_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT6_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.280e-110 Identity = 149/215 (69.30%), Postives = 189/215 (87.91%), Query Frame = 1
Query: 7 ETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
E +KI+F++Y LEI +LI F+ +AF+LEQK+ F+KP+KWF++FNALLFQR FSA AY++PYLDMINLHIPLLKD++PL+LR+F+P+F+ADSID +QQIPFLTF+Y+ YG FIR KIP DR IRYN+MYSIML+SLQGIIN+MFI F ++ I D ++R+ ITL++FF WL+LYIPCF+R+ GKYD+NKFIREAVEVHLGRDGPDFIWWD+ RK
Sbjct: 3 EAIKIMFNLYWLEIVILILFVLLAFVLEQKWNFNKPRKWFLSFNALLFQRSFSAAAYFIPYLDMINLHIPLLKDDHPLILRLFMPNFIADSIDFIQQIPFLTFIYLLFAYGFFIRSKIPGDRLIRYNIMYSIMLVSLQGIINEMFIAFTDSFIYDDYLRAQITLMAFFWWLSLYIPCFVRALLGKYDKNKFIREAVEVHLGRDGPDFIWWDRTRK 217
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A6B7EVD7_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVD7_9PHAE) HSP 1 Score: 320 bits (820), Expect = 1.220e-108 Identity = 147/215 (68.37%), Postives = 187/215 (86.98%), Query Frame = 1
Query: 7 ETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
E + I +Y EI++L+ F+ IAFILEQKF F KP++WF++FN L+F+RG SALAY VPYLDMINLHIPLLKD +PLVLR+F+P+F+ +SID++QQ+PFL+F+Y+S+GYG FIRYKIP DR +RYN+MYSIML+SLQGIIN+MFI+F E I++ ++RS +TL++FF WL LYIPCF+R+F GKYDENKFIREAVEVHLGRDGPDFIWWD+ RK
Sbjct: 3 EAIGIALGLYWAEITILVLFLVIAFILEQKFNFKKPRQWFLSFNNLIFRRGLSALAYAVPYLDMINLHIPLLKDNHPLVLRLFMPNFITESIDIMQQVPFLSFIYLSIGYGFFIRYKIPGDRLVRYNIMYSIMLVSLQGIINEMFISFTEAFIVNDYLRSQVTLMAFFCWLTLYIPCFVRAFLGKYDENKFIREAVEVHLGRDGPDFIWWDRIRK 217
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A8F0F7K9_9PHAE (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7K9_9PHAE) HSP 1 Score: 270 bits (691), Expect = 5.850e-89 Identity = 123/222 (55.41%), Postives = 173/222 (77.93%), Query Frame = 1
Query: 1 MIETLK-----ILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
MI+ LK + F +Y LE+ + I F+FI FILEQ+F F+KP+KWF AFN L+ QR S +AYYVPYLD++N H+PL+ + +P ++R+FLP+FVA+SID+VQ+IPFL+F+Y+ LGYG+ IRYKIPKDRF+R+N+MY I++IS QGI +++F+ F + D +S L++F W+ ++IPCF+R+ GKY+ N F+REA+EVHLGRDGPDFIWWD+ RK
Sbjct: 1 MIDKLKENLVELFFGVYWLELLIFILFLFIGFILEQRFNFNKPRKWFFAFNGLICQRVLSVMAYYVPYLDVVNTHMPLIAEAHPFLVRLFLPNFVAESIDIVQRIPFLSFIYLMLGYGVLIRYKIPKDRFVRFNIMYGIIIISFQGIFHELFLNFTNAFVKDPVDQSEAALLAFLSWVVIFIPCFLRALFGKYEGNTFMREAIEVHLGRDGPDFIWWDRTRK 222
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A8F0JYW7_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYW7_9PHAE) HSP 1 Score: 266 bits (680), Expect = 2.320e-87 Identity = 116/209 (55.50%), Postives = 165/209 (78.95%), Query Frame = 1
Query: 25 FSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
FS Y LE+S+ + FI + F++E+ F F KP+KWF+AFN L+ QR S LA+YVPYLD++N HIPL+ + +PL++R+FLP F+A S+D+VQ+IPFL+F+Y+ LGYG+ IRYKIP+DRF+R+N+MY I++IS QGI +++FI F + D +S L++F W+ ++IPCF+R+ GKYD N F+REA+E+HLGRDGPDFIWWD+ RK
Sbjct: 9 FSAYWLELSIFLFFIVLGFVMEKAFNFTKPRKWFMAFNGLICQRVLSVLAFYVPYLDVVNTHIPLIAETHPLLVRIFLPTFIAQSVDIVQRIPFLSFLYLLLGYGILIRYKIPEDRFVRFNIMYGILIISFQGIFHELFINFTNVFVKDPIDKSEAALMAFLAWVLIFIPCFLRALFGKYDSNTFMREAIEIHLGRDGPDFIWWDRTRK 217
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A0S0G9V7_COSCS (Uncharacterized protein n=24 Tax=Laminariales TaxID=2886 RepID=A0A0S0G9V7_COSCS) HSP 1 Score: 263 bits (672), Expect = 4.510e-86 Identity = 109/215 (50.70%), Postives = 170/215 (79.07%), Query Frame = 1
Query: 7 ETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
L++ F +Y +EI + I F+ + F+LEQKF F+KP+KWF+AFN L+ QR S LAYY+PYLD++N H+PL+ + +P ++R+FLP+++A+S++++Q++PFL+F+Y+ +GYG+ +RYKIP+DRF+R+N+MY I++IS QGI +++FI F + + +S L++F W+ ++IPCF+R+ GKY+ N F+REA+EVHLGRDGPDFIWWD+ RK
Sbjct: 8 NVLELFFGVYWIEIFIFILFLVLGFVLEQKFNFNKPRKWFLAFNGLVCQRVLSVLAYYIPYLDVVNTHMPLIAETHPFLVRIFLPNYIAESVNIIQKVPFLSFIYLLVGYGILVRYKIPEDRFVRFNIMYGIIIISFQGIFHELFINFTNVFVKNPADKSEAALLAFLAWVVIFIPCFLRALFGKYEGNTFMREAIEVHLGRDGPDFIWWDRTRK 222
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A141BSC7_9PHAE (Orf219 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSC7_9PHAE) HSP 1 Score: 257 bits (657), Expect = 5.740e-84 Identity = 109/209 (52.15%), Postives = 160/209 (76.56%), Query Frame = 1
Query: 25 FSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
F +Y +EI L F+ + F++EQKF +P+KWF+ FN ++ QR S YY+PYLD+IN H+PL+++ +P ++R+FLP F+ S+ +QQIPFL F+Y+ LGYG+FIRYK+PKDRFIRYN+MY I+++S QGII+++F+ + L+S RS L++F W+ ++IPCFIR+ GKY+ N F+REA+EVHLGRDGPDF+WWD+++K
Sbjct: 10 FDVYWIEIILFFSFLGLGFLVEQKFNIKEPRKWFVKFNGIILQRILSLFCYYIPYLDIINTHLPLIEETHPYIVRLFLPTFIIGSLQFIQQIPFLPFIYLMLGYGIFIRYKLPKDRFIRYNIMYGIIILSFQGIIHELFLNITKVFCLNSKDRSEAALLTFLGWILIFIPCFIRAILGKYESNPFLREAIEVHLGRDGPDFVWWDRQKK 218
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A2R4QPT5_9PHAE (Hypothetical chloroplast protein n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPT5_9PHAE) HSP 1 Score: 257 bits (656), Expect = 9.310e-84 Identity = 109/209 (52.15%), Postives = 162/209 (77.51%), Query Frame = 1
Query: 16 KILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDK 642
++ F +Y +EI + F+ + FILEQKF KP+KWF FN ++ QR S AYY+PYLD+IN H+PL+++ +P ++R+FLP+++A+S+ ++QQIPFL F+Y+ LGYG+FIRYK+PKDR +R+N+MY I++IS QGII+++F+ F + DS RS L++F W+ ++IPCF+R+ GKY+ N F+REA+EVHLGRDGPDF+WWD+
Sbjct: 7 ELFFDVYWIEIIIFFSFLTLGFILEQKFNIKKPRKWFFEFNTVILQRLLSIFAYYIPYLDVINTHLPLIEETHPYLVRLFLPNYIAESLQIIQQIPFLPFLYLMLGYGIFIRYKLPKDRLVRFNIMYGIIIISFQGIIHELFLNFTKIFCFDSTDRSEAALLTFLGWVLIFIPCFLRALFGKYESNPFLREAIEVHLGRDGPDFVWWDR 215
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Match: A0A8F0FAJ4_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAJ4_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.600e-77 Identity = 107/204 (52.45%), Postives = 155/204 (75.98%), Query Frame = 1
Query: 40 LEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFQRGFSALAYYVPYLDMINLHIPLLKDENPLVLRVFLPDFVADSIDLVQQIPFLTFVYISLGYGLFIRYKIPKDRFIRYNVMYSIMLISLQGIINDMFITFIETIILDSHIRSTITLVSFFLWLALYIPCFIRSFAGKYDENKFIREAVEVHLGRDGPDFIWWDKKRK 651
+EI + + F +AF+LE+K KPKKWF+AFN+L+ QR FS +AYYVPYLD++N H+PLL+ + P +R+FLP+F+ DSI+++Q+IPFL+F Y+ + YG+ +RYKIPKDR +R+NVMY +++IS QGI +++++ T I D ++ L++ LWL + IPCF R+ G+Y N F+REA+EVHLGRDGPDFIWWD+ RK
Sbjct: 1 MEIFIFLLFFGLAFLLEKKLNIKKPKKWFVAFNSLICQRVFSVMAYYVPYLDILNTHVPLLQKQYPFFIRLFLPNFILDSINIIQKIPFLSFFYLLVAYGILVRYKIPKDRLVRFNVMYGVLIISFQGIFHELWLLITGTFIPDPQQKAESALLALILWLIVMIPCFTRALFGRYTRNFFMREAIEVHLGRDGPDFIWWDRTRK 204 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12476.1540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12476.1540.1 >prot_E-siliculosus-1a_F_contig12476.1540.1 ID=prot_E-siliculosus-1a_F_contig12476.1540.1|Name=mRNA_E-siliculosus-1a_F_contig12476.1540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=220bp MIETLKILFSIYRLEISLLIGFIFIAFILEQKFQFDKPKKWFIAFNALLFback to top mRNA from alignment at E-siliculosus-1a_F_contig12476:526..1185+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12476.1540.1 ID=mRNA_E-siliculosus-1a_F_contig12476.1540.1|Name=mRNA_E-siliculosus-1a_F_contig12476.1540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=660bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12476:526..1185+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12476:526..1185+ >mRNA_E-siliculosus-1a_F_contig12476.1540.1 ID=mRNA_E-siliculosus-1a_F_contig12476.1540.1|Name=mRNA_E-siliculosus-1a_F_contig12476.1540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12476:526..1185+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |