mRNA_E-siliculosus-1a_F_contig1246.1535.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A6H5KUS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS3_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.040e-53 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
IPSERPDPSKP+PRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRY LAICTGNHHVYLWSP
Sbjct: 383 IPSERPDPSKPNPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYKLAICTGNHHVYLWSP 469
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: D8LDM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM7_ECTSI) HSP 1 Score: 119 bits (298), Expect = 5.360e-30 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQ 171
IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWD EDLSLSSVVVQ
Sbjct: 288 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDTEDLSLSSVVVQ 344
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A7S2Y1Z6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Z6_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.390e-27 Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 16 PDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWS 258
PDP K PRLGVGQ M WS DGRYLATRNDNM + LW+WD + L SV V ++ +RS KW P TLA+C+GN VYLW
Sbjct: 185 PDPRKADPRLGVGQ-MGWSHDGRYLATRNDNMPTTLWIWDTHSVGLLSVAVFLDPIRSFKWSPNTATLALCSGNQRVYLWK 264
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A6A7G2L0_9CRUS (WD repeat-containing protein WRAP73-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G2L0_9CRUS) HSP 1 Score: 106 bits (264), Expect = 1.440e-25 Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWS 258
IP+ DP KP+P++GVG + SWS D R+L T+NDNM +ALW+WD LSLSSV+ Q ESV+ A+W PT+ LA C GN + YLW+
Sbjct: 233 IPTITVDPEKPNPKIGVGSV-SWSSDDRFLCTKNDNMPNALWIWDLRKLSLSSVMFQHESVKVARWDPTKPRLAFCCGNGNFYLWT 317
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A2B4SSG9_STYPI (WD repeat-containing protein WRAP73 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SSG9_STYPI) HSP 1 Score: 105 bits (262), Expect = 6.890e-25 Identity = 46/87 (52.87%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
+P +PDP K +P+LGVG + ++S D RYLAT+NDNM +ALW+WD L LS++++Q SVR+ +W P + LA+CTGN+ +YLWSP
Sbjct: 310 VPILKPDPEKANPKLGVGHV-AFSQDNRYLATKNDNMPNALWLWDVSKLCLSALLLQTSSVRAFQWDPKQPRLAVCTGNNKLYLWSP 395
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: UPI00077A880C (WD repeat-containing protein WRAP73-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A880C) HSP 1 Score: 105 bits (262), Expect = 6.890e-25 Identity = 45/87 (51.72%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
+PS +PDP KP+P+LGVGQI ++S D RYLAT+NDNM +A+W+WD L L+++++Q + V++ +W P + LAICT N+ +Y+WSP
Sbjct: 310 VPSVKPDPEKPNPKLGVGQI-AFSGDNRYLATKNDNMPNAVWLWDVSKLCLAALLLQSKPVKAFQWDPKQPRLAICTANNKLYMWSP 395
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: UPI001FB65324 (WD repeat-containing protein WRAP73 isoform X2 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB65324) HSP 1 Score: 103 bits (258), Expect = 1.510e-24 Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
IP +PDP + +P++GV I+++S D RYLATRNDNMA+A+WVWD + +SL +V+ Q VR +W P R LA+CTGN +YLWSP
Sbjct: 253 IPVVKPDPDRANPKIGVS-IVAFSSDSRYLATRNDNMATAVWVWDMQKMSLEAVLEQTSGVRCLQWDPRRPRLALCTGNTKLYLWSP 338
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: UPI001454F561 (WD repeat-containing protein WRAP73-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454F561) HSP 1 Score: 104 bits (259), Expect = 1.990e-24 Identity = 44/87 (50.57%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
IP +PDP K +P++GVGQ+ S+S D RY+A++NDNM +ALW+WD + LS + +++Q+ S+R +W P + LAICTGN+ +Y+WSP
Sbjct: 321 IPVVKPDPDKANPKVGVGQL-SFSPDNRYMASKNDNMPNALWIWDVQKLSQAVLLLQVNSIRCIQWDPHKSRLAICTGNNKLYMWSP 406
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A1A7Y4C4_9TELE (WD repeat containing, antisense to TP73 (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7Y4C4_9TELE) HSP 1 Score: 100 bits (249), Expect = 2.480e-24 Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
IP +PDP + +P++GV ++++S D RYLAT+NDNMA+A+WVWD + +SL +V+ Q +VR +W P LA+CTGN +YLWSP
Sbjct: 98 IPVVKPDPDRANPKIGVS-VLAFSSDSRYLATKNDNMATAVWVWDMQKMSLEAVLEQTAAVRCFQWDPKHPRLALCTGNGKLYLWSP 183
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Match: A0A7M7NXM6_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NXM6_STRPU) HSP 1 Score: 103 bits (257), Expect = 3.810e-24 Identity = 42/87 (48.28%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSLSSVVVQMESVRSAKWCPTRYTLAICTGNHHVYLWSP 261
+PS +PDP K +P++G+ ++S+S D R++ ++NDNM +ALW+WD + LS +++++Q+ SVR+AKW P R LA+CTG++ +YLWSP
Sbjct: 315 LPSIKPDPDKANPKIGIS-LLSFSPDNRFMLSKNDNMPNALWIWDVQKLSQAAMLLQVGSVRAAKWDPCRARLAVCTGSNKLYLWSP 400 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1246.1535.1 >prot_E-siliculosus-1a_F_contig1246.1535.1 ID=prot_E-siliculosus-1a_F_contig1246.1535.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=87bp IPSERPDPSKPHPRLGVGQIMSWSVDGRYLATRNDNMASALWVWDAEDLSback to top mRNA from alignment at E-siliculosus-1a_F_contig1246:34205..35149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1246.1535.1 ID=mRNA_E-siliculosus-1a_F_contig1246.1535.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=945bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1246:34205..35149- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1246:34205..35149- >mRNA_E-siliculosus-1a_F_contig1246.1535.1 ID=mRNA_E-siliculosus-1a_F_contig1246.1535.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=522bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1246:34205..35149- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |