mRNA_E-siliculosus-1a_F_contig1246.1534.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A6H5KVQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ8_9PHAE) HSP 1 Score: 577 bits (1486), Expect = 2.040e-186 Identity = 409/631 (64.82%), Postives = 427/631 (67.67%), Query Frame = 1
Query: 826 MSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVG--TARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGALPLCQGTGAPGAEFGGSPSQLSANALPVRQQQPGSSSESLTTATPRLLEHPSPPSRPADRRSRNSLSSTGLLEGEVDGAEGTSRSVIEDDEDSHGFEGPSSTTSGLLSSRSFGRTAVESTMLASPSXXXXXXXXXXXXXXXXXXXXETAESATGGDTEASAXXXXXXXXXTATTEASPREEITAAVATAPLLPSVEVAPVSGSFMAGAASCSFCSVADTAATAGDAAARGTENGGNVNPLGEAASPCISQQPHPSPSSSMLSSRARLLRRLPCGHNAHEACLVPLILESVGRGNPSSCVCPVDSCPIFPALSRRSRSRRSSSG-----SDGGGTPSASGDNHRRGTRSAPXXXXXXXXXXXXXXXXXXXXAAAARESLRRNGGGFADDALGIELVGSGLAQQPCPXXXXXXXXXXXXXXXXXXXXAASPTFPMESYTRATNDNGLAAPRDDAGTHEGAEEAGKSGGGGGVIGRRVGPCRNVRASCLRGRAIRSGGSGSDSGFALFVGGAGIIVADGA 2697
MSGVRGRRS+SSG AIAP CTP GRHRHPFVQGEAATDPPEWKPAE PDGGRLGG RGGXXX TARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGALP+ QGTGA E GGSPSQLSANALPVRQQ SGLLS RS GRTAV +T XXXXXXXXXXXXXXXXXXXX XXXXXXXXX EASPREE TA+VATAPLLPSVEVAPVSGSFMAGAASCSFCSVADT ATAGDAAA G ENG NV+P GEAASPCISQQPHPS SSSMLSSRAR L+RLPCGHNAHEACL+PLILESVGRG+P SC CPVDSCPIFPALSR+ SDGGGTPSA GD++RRGTRSAP AAAARESLRRNG G ADD LGI LVGSGLAQQPCP XXXXX AS T P S++RATND+ L A RDD GTH+G EAG V+GRRVGPCRN+RAS LRG AIRS SGSDS F+LFVGGAGI ADGA
Sbjct: 1 MSGVRGRRSTSSGDAIAPPCTPAGRHRHPFVQGEAATDPPEWKPAEPPDGGRLGGFRGGXXXXXXXXTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGALPIFQGTGATDTECGGSPSQLSANALPVRQQ-----------------------------------------------------------------------LSGLLS-RSSGRTAVVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASPREETTASVATAPLLPSVEVAPVSGSFMAGAASCSFCSVADTTATAGDAAASGIENG-NVDPRGEAASPCISQQPHPSLSSSMLSSRARPLKRLPCGHNAHEACLLPLILESVGRGDPFSCSCPVDSCPIFPALSRQXXXXXXXXXXXXXXSDGGGTPSAGGDDYRRGTRSAPSATPLPAGRTGGSAADRYARAAAARESLRRNGLGCADDTLGIGLVGSGLAQQPCPQPXXXXXHGAAVAD-------ASATLPNGSHSRATNDSRLVASRDDEGTHDGGVEAGNXXXXXXVVGRRVGPCRNLRASRLRGLAIRSSDSGSDSSFSLFVGGAGI-AADGA 550
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: D8LDM8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM8_ECTSI) HSP 1 Score: 479 bits (1233), Expect = 1.170e-158 Identity = 280/359 (77.99%), Postives = 289/359 (80.50%), Query Frame = 1
Query: 1 MPSDTTRVCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIKVQAAFFRCLVCLPAGSWDLCRRCYAMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGR 1077
MPSDTTRVCIFPRTVDP+VLKVPPSNPLAWQTALIDSEVDYILSGGGGD+G+K GASAPGAARPQGQQPREFLRRG XXXXXXXX XXXXXXXXXXXXXXXXXXXXHPRLEI+PGEVCPVCQEEMDEGGGEGE+ GKV+AA+GGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCR DWGITAVRALREDARQQRKGKG GGGRSP DLCRRCYAMSGVRG RSSSSGGAIAP CTP GRHRHPFVQGEAA +PPEWKPAE P GGRLGG+RGG GVGTARRADPVAAAGLLSLQ R
Sbjct: 1 MPSDTTRVCIFPRTVDPKVLKVPPSNPLAWQTALIDSEVDYILSGGGGDKGRKHGASAPGAARPQGQQPREFLRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRLEIAPGEVCPVCQEEMDEGGGEGENDGKVVAAEGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRADWGITAVRALREDARQQRKGKGGGGGRSP-----------------------------------------------DLCRRCYAMSGVRGTRSSSSGGAIAPPCTPFGRHRHPFVQGEAAAEPPEWKPAEPPGGGRLGGSRGGRGGGVGTARRADPVAAAGLLSLQAR 312
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A835YJ61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ61_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.030e-30 Identity = 156/476 (32.77%), Postives = 185/476 (38.87%), Query Frame = 1
Query: 25 CIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXT------GVFREADXXXXXXXXXXXXXXXXXXXXHP---RLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIKVQAAFFRCLVC-----------------------LPAGSW-----------------------------DLCRRCY-AMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGALP--------------LCQGTGAPGAEFGGSPSQL 1224
C+ V +VL+VP +PL+WQ +L+DSE+D ILSG + ++ A A A +FL++G G AD XXXXXXXXXXXXX RLE+ PGEVCP+CQE M+ G E+ LTYCR GCGNNMH RCM +YAEHRRSS C LCR DWG A+R L+ + AF+RCL C A W DLC RCY M G R S RH FV A + P W ++P GG G GG A GLL+LQGREIT AD++ LL LD S PLHEHLL ALP C G G GGS QL
Sbjct: 68 CVHALYVMIKVLRVPQDHPLSWQLSLVDSEIDTILSGWVAKQPRQAPARAAAA---------QFLKKGSGHTAAEAAAPRGKSGGSGSGADDXXXXXXXXXXXXXESGKGGDGAVVRLEVMPGEVCPICQEGME---GAPEE------------LTYCRRGCGNNMHVRCMRVYAEHRRSSAQDVTCCLCRADWGPLALRELKTAEKTAXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXNAFYRCLHCSGXXXXXXAGHGGAGRTPHSLDGAAAAQWPGGEGDPLLSPLQGGGGRGRGMGGSSCARDLCERCYETMRGAANARCLSG--------------RHVFVMAAAGGEAPVWAVPKRPPGGVAGLGAGG---------------AGGLLALQGREITAADYDALLALDDSGA-PLHEHLLAALPRDARTLDDAEARCAACAGAVCGGGGSGGSARQL 475
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A7S3DDN7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DDN7_9EUKA) HSP 1 Score: 116 bits (290), Expect = 9.030e-24 Identity = 102/376 (27.13%), Postives = 146/376 (38.83%), Query Frame = 1
Query: 52 QVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCYAMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWK---PAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGALP 1167
++L+VP +PL+WQ +L+D EVD +L +R ++ D R ++ +VCP+CQEEM GGGE LTYCR GCGNN+H +CM ++AEH+ S+ K CPLCR DWG + L++DA Q R+ V GC +C C + ++ F+CL+C + LC+ C+ V H HPFV + +WK P QP G VA + L LQGRE+T+ D++ LL LD PL++ L+ LP
Sbjct: 79 KILRVPKESPLSWQVSLLDREVDEVLR----------------------------MRHVRQRVQPAAVQKKEKKGDKKEEVEVE--------------RKQVEEEDVCPICQEEM--GGGEEA-------------LTYCRRGCGNNIHVKCMRVWAEHKLSTEGKVTCPLCREDWGSNPLTELKKDAEQHRRPVDV-----------------HYGC-------SCARCRLSPIRGKRFKCLIC---ADYSLCQSCFDAK--------------------VHSH-HPFVCKDTTLAEEDWKEAVPPNQPTG----------------------VAESLLNELQGRELTSEDYDTLLQLDQPQSRPLYDFLISHLP 327
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A6G0XXS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXS3_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.500e-22 Identity = 103/388 (26.55%), Postives = 154/388 (39.69%), Query Frame = 1
Query: 22 VCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGG------GGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCYAMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGAL 1164
+C V ++L+VPP+NP+ WQ +LIDSE + +L+GG GG R + FLRR + AD H +E GEVC +CQEEM E LTYC+ GCGNN H CM ++ E R+ S + CPLCR DWG +A+ L+++A R+P+ +G +C+ C K ++ +RCL C DLC RC+ + +H FV +A W PA + + R+ ++ + L+GRE++ AD+++LL LDA PL ++L+ L
Sbjct: 65 ICCHILFVMMKILRVPPTNPVVWQRSLIDSETNMVLTGGYCQAENGGGR-------------------KTFLRR--------------KLADPTAPSSQPETNEGQARECTRHALVE---GEVCAICQEEMVEAQQN---------------LTYCKRGCGNNFHIDCMKIFGESRKQSKENIICPLCRQDWGDSALTELKKEADVAN--------RNPLVHTG----------------TSCKQCQTKPIRCQRYRCLQCKHV---DLCERCFKSNA---------------------HAKHSFVMRKAHKG--TWFPALR-------------------SVRSSILSPEAVRELEGRELSNADYDMLLELDAGEKYPLQDYLMANL 332
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A485KX01_9STRA (Aste57867_12986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX01_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.840e-22 Identity = 101/372 (27.15%), Postives = 151/372 (40.59%), Query Frame = 1
Query: 52 QVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCYAMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLLGAL 1164
++L+VPP+N + WQ +LIDSE + +L+GG +K + FLRR AD R E+ GEVC +CQEEM V A K LTYC+ GCGNN H CM ++ E R+ S + CPLCR DWG +A+ L+++A R+P+ SG +C+ C K ++ +RCL C DLC RC+ + +H FV +A W PA + R+ ++ + L+GR+++TAD+++LL LDA+ PL ++L+ L
Sbjct: 68 KILRVPPANAVVWQRSLIDSETNMVLTGGYSQATEKKTTA--------------FLRR----------KVAVDAADAGAEALAGSKESE---------RHELVEGEVCAICQEEM------------VEAQKN---LTYCKRGCGNNFHIDCMKIFGESRKQSKENIICPLCRQDWGDSALTELKKEADVAN--------RNPLVHSG----------------ASCKQCQTKPIRCQRYRCLQCKQV---DLCERCFKSNA---------------------HAKHAFVVRKAHKG--TWFPALR-------------------TIRSSMLSPDAITELEGRDLSTADYDMLLELDAAEKYPLQDYLMSHL 322
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: G4Z969_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z969_PHYSP) HSP 1 Score: 104 bits (260), Expect = 5.220e-20 Identity = 79/271 (29.15%), Postives = 113/271 (41.70%), Query Frame = 1
Query: 13 TTRVCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCY 822
T +CI V +VL+VP + P+ WQ +LIDSE++ +L GG ++ +RP P+ +++R R D R E+ GEVC +CQE+MD+ LT+CR GCGNN H CM ++ E RR S + CPLCR DWG TA+ +LR++ + V G S CR C K ++ +RC+ C DLC RC+
Sbjct: 63 TADICIHILFVMLKVLRVPATTPVVWQKSLIDSEIETLLRGGYREK-----------SRPA---PKPYMKR------RKEEAAAARPEDADVE------------------RHELVEGEVCAICQEDMDDNQP----------------LTFCRKGCGNNFHVECMKVFGESRRQSKENIICPLCRQDWGDTALSSLRKEIDAANRAPNVHKGAS------------------------CRKCKTKPIRCERYRCVQCKNV---DLCARCF 252
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: D0MU96_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU96_PHYIT) HSP 1 Score: 102 bits (255), Expect = 2.080e-19 Identity = 77/271 (28.41%), Postives = 112/271 (41.33%), Query Frame = 1
Query: 13 TTRVCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCY 822
T +CI V +VL+VPP+ P+ WQ +L+DSE++ +L GG ++ + +P ++ +E + +E D R E+ GEVC +CQE+MD+ LT+CR GCGNN H CM ++ E RR S + CPLCR DWG A+ ALR+ + V G S CR C K ++ +RC+ C DLC RC+
Sbjct: 63 TADICIHILFVMLKVLRVPPTTPIVWQKSLLDSEIETLLRGGYREKSRS-------ERKPYTKKRKEIV--------------ASKEPDDVDVD-----------------RHELVEGEVCAICQEDMDDNQP----------------LTFCRTGCGNNFHIECMKVFGESRRQSKENIICPLCRQDWGGEALTALRKAIEAANRAPNVHKGAS------------------------CRKCKTKPIRCERYRCVQCKNV---DLCARCF 252
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: W4H730_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H730_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.170e-19 Identity = 98/376 (26.06%), Postives = 149/376 (39.63%), Query Frame = 1
Query: 52 QVLKVPPSNPLAWQTALIDSEVDYILSGG----GGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXT---GVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCYAMSGVRGRRSSSSGGAIAPLCTPVGRHRHPFVQGEAATDPPEWKPAEQPDGGRLGGTRGGXXXGVGTARRADPVAAAGLLSLQGREITTADFELLLTLDASPVLPLHEHLL 1155
++L+VP SNP+ WQ +LIDSE + +L+ G G G+KP FLRR T G+ +E R + GEVC +C+E+M E LTYC+ GCGNN H CM + E R+ + + CPLCR DWG +A+ L+++A R+P+ SG +C+ C K ++ FRCL C DLC RC+ + +H FV +A W PA + R+ ++ + L+GRE++ AD+++L+ LDA+ PL ++L+
Sbjct: 76 KILRVPASNPVIWQRSLIDSETNMVLTEGYSQVDGGGGRKP-----------------FLRRKVLEDEASPETNGDGLGKECV----------------------RHTVVNGEVCAICREDMMEAQHN---------------LTYCKRGCGNNFHIDCMKILGESRKQAKENIICPLCRHDWGDSALSELKKEADVSN--------RNPLVHSG----------------ASCKQCQTKPIRCQRFRCLQCKHV---DLCERCFKSNA---------------------HAKHSFVVRKAHKG--TWFPALR-------------------TVRSSLLSPQAINDLEGRELSNADYDMLMELDAAEKYPLQDYLM 328
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Match: A0A833T0A3_PHYIN (RING-type zinc-finger n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T0A3_PHYIN) HSP 1 Score: 102 bits (255), Expect = 1.060e-18 Identity = 77/271 (28.41%), Postives = 112/271 (41.33%), Query Frame = 1
Query: 13 TTRVCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRGKKPGASAPGAARPQGQQPREFLRRGGXXXXXXXXTGVFREADXXXXXXXXXXXXXXXXXXXXHPRLEISPGEVCPVCQEEMDEGGGEGEDGGKVIAAKGGGGLTYCRDGCGNNMHARCMLMYAEHRRSSGDKPCCPLCRVDWGITAVRALREDARQQRKGKGVGGGRSPVGRSGRRRGGRSSGCQASVAPVTCRSCSIK-VQAAFFRCLVCLPAGSWDLCRRCY 822
T +CI V +VL+VPP+ P+ WQ +L+DSE++ +L GG ++ + +P ++ +E + +E D R E+ GEVC +CQE+MD+ LT+CR GCGNN H CM ++ E RR S + CPLCR DWG A+ ALR+ + V G S CR C K ++ +RC+ C DLC RC+
Sbjct: 63 TADICIHILFVMLKVLRVPPTTPIVWQKSLLDSEIETLLRGGYREKSRS-------ERKPYTKKRKEIV--------------ASKEPDDVDVD-----------------RHELVEGEVCAICQEDMDDNQP----------------LTFCRTGCGNNFHIECMKVFGESRRQSKENIICPLCRQDWGGEALTALRKAIEAANRAPNVHKGAS------------------------CRKCKTKPIRCERYRCVQCKNV---DLCARCF 252 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1246.1534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1246.1534.1 >prot_E-siliculosus-1a_F_contig1246.1534.1 ID=prot_E-siliculosus-1a_F_contig1246.1534.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1534.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1011bp MPSDTTRVCIFPRTVDPQVLKVPPSNPLAWQTALIDSEVDYILSGGGGDRback to top mRNA from alignment at E-siliculosus-1a_F_contig1246:26532..31014+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1246.1534.1 ID=mRNA_E-siliculosus-1a_F_contig1246.1534.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1534.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4483bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1246:26532..31014+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1246:26532..31014+ >mRNA_E-siliculosus-1a_F_contig1246.1534.1 ID=mRNA_E-siliculosus-1a_F_contig1246.1534.1|Name=mRNA_E-siliculosus-1a_F_contig1246.1534.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6066bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1246:26532..31014+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |