mRNA_E-siliculosus-1a_F_contig12459.1532.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: UPI00110E2F87 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Halomonas sp. ATBC28 TaxID=2545264 RepID=UPI00110E2F87) HSP 1 Score: 642 bits (1657), Expect = 1.760e-224 Identity = 319/486 (65.64%), Postives = 387/486 (79.63%), Query Frame = 1
Query: 7 EQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEER----SVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVLTDRKADKETEKRRLSDIISRP-----SLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSNDYLNTFGDGADDSNA-NRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEAKLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDL 1434
E++ A YLF+QVQIMRVEVP+DTDLNHYFEVMNNRGEQLEKHEVLKSR+MS L + E S L QVWEACANMERY+QMGF QR+ +FG+K+W NFD++K+VLT +++ EKR LS+IIS+P Q + Q KQ EEAPERF++VINFPNFLLHVLR+TTG D+PLDDK+LI AFD+Y+L ++D ERVK F FDLLKCKY+YD+++IKREF G+ D WSLKRLKWQ S+ S+DY+NTF + NRR+LML SALHVSTPTMVYKHWLNAAL YLY A++VTF++YL+ LES+ RCFVYDRFL+ E+ADYFEIIY R GQL+A++WD ID++KL FGNIANNL+FNYLDYLLWL++R + V++YEFSF SSVEHYYPQTP++G E+LP LN FGNLCLISHSKNSRLSNL P AK+ +Y AGGIDS+KQWLMM + WG+ EI+QH EM+ F DL
Sbjct: 176 EEEFADYLFNQVQIMRVEVPKDTDLNHYFEVMNNRGEQLEKHEVLKSRMMSKLQNSAESATLISCLDQVWEACANMERYVQMGFVTHQRNSLFGEKNWDTLKVDNFDDLKRVLTSNSNERDAEKRCLSNIISQPLPQRCQSQSQNQNKQETIEEAPERFSTVINFPNFLLHVLRLTTGEDIPLDDKQLITAFDEYLLRKSDASERVKRFTFDLLKCKYMYDRYVIKREFAGSNDAWSLKRLKWQRSSGSSDYVNTFSQRVKTTGEDNRRLLMLQSALHVSTPTMVYKHWLNAALNYLYHAKSVTFQSYLERLESIARCFVYDRFLTGQEQADYFEIIYERKGQLRAQSWDDIDDSKLMFGNIANNLVFNYLDYLLWLEFRKVTN--VREYEFSFNSSVEHYYPQTPMNGYEQLPESTLNAFGNLCLISHSKNSRLSNLPPGAKRSYYKAGGIDSIKQWLMMKNKVWGKTEILQHQGEMVTKFMQDL 659
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: A0A1N6CS34_9GAMM (Uncharacterized protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A1N6CS34_9GAMM) HSP 1 Score: 608 bits (1568), Expect = 2.850e-211 Identity = 302/480 (62.92%), Postives = 382/480 (79.58%), Query Frame = 1
Query: 19 ARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEERSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVLTDRKADKETEKR-RLSDIISRPSL----QDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSNDYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEAKLRFGNIANNLIFNYLDYLLWLK-YRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
A YLF VQIMRV+VP+DTDLNHYFE+MNNRGEQLEKHEVLKS+LMS L+ + +VL VWEACANMERY+QMGFTP +RDR+FG+++WG P+NF E+ Q+L ++++ LS +I+ P + + ++K G EE+PERFN+VINFPNFLL VLRVTTG ++PLDDKRLI F++++L++ D E+VK+FV++LLKCK+L+D +IIKREFTGN D WSLKRLKWQAS+ SNDY+NTFG DS+ANRRVLMLLSALH STPTMVYKHWLNAAL +L++AE V +AYL++LES+ RCFVYDRFL+ + ++Y++IIYRR+GQ K W IDE KL FGNIANNL+FNYLDYLLW + Y+ +S+ +K Y FSFRSSVEHYYPQ P+ G + L L+ FGNLCLISHSKNSRLSNL+P+AK+D+Y GGIDS+KQWLMM + W + EI QH+ EML+VF+ DL +
Sbjct: 185 ADYLFHYVQIMRVQVPQDTDLNHYFEIMNNRGEQLEKHEVLKSKLMSQLEKSD-YTVLQNVWEACANMERYVQMGFTPAERDRLFGEQNWGELQPQNFAELSQMLAKTSTQQDSDHALSLSQLIATPPSAKHQEAQNRQKNGKKEESPERFNTVINFPNFLLQVLRVTTGQNIPLDDKRLIVVFEEHLLSKADSTEQVKSFVYNLLKCKFLFDHYIIKREFTGNADDWSLKRLKWQASSKSNDYVNTFGAEDGDSDANRRVLMLLSALHTSTPTMVYKHWLNAALSFLFRAEIVESQAYLRHLESIARCFVYDRFLAYGDGSEYYDIIYRRDGQPLTKRWSDIDETKLTFGNIANNLVFNYLDYLLWCQHYKENSR--LKSYSFSFRSSVEHYYPQNPLPGVDELDADDLHSFGNLCLISHSKNSRLSNLSPEAKKDYYRKGGIDSIKQWLMMETSPWTQDEIQQHNDEMLKVFKKDLES 661
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: A0A7W5GYY8_9GAMM (Uncharacterized protein n=1 Tax=Halomonas fontilapidosi TaxID=616675 RepID=A0A7W5GYY8_9GAMM) HSP 1 Score: 592 bits (1526), Expect = 8.560e-205 Identity = 298/484 (61.57%), Postives = 377/484 (77.89%), Query Frame = 1
Query: 7 EQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEERSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVLT-DRKADKETEKRRLSDIISRP-SLQDERQRKQGA---AEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSNDYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEAKLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPS-WGEPEIVQHHKEMLEVFQHDLRT 1440
++D + YLF VQIMRV+VP DTDLNHYFEVMNNRGEQLEKHEVLKS++MS L+ + +VL VWEAC+NMERY+QMGFT QRDR+FG++DWG P N+ E++ +L D D T+ LS +I +P S +D++ KQ +EE PERFNSVINFPNFLL VLRVTTG D+PLDDKRLI +F ++L+ D ERV+ F ++LLKCK L D ++IKRE+TGNTD WSLKRLKWQASN S+DY+NTFG DS+ NRRVLMLLSALHVSTPTMVYKHWL+AAL++L+++E V + YL +LESV+RCFVYDRFL+ + A+Y++II+RR G+L ++ W IDE KLRFGNI NN +FNYLDYLLW KY ++ + +KY FSFRSSVEHYYPQ P+ G ++L +N FGNLCLISHSKNSRLSN +PK+K+++Y G IDS+KQWLMM++ + W EI QH+ EM+EVF+ DL +
Sbjct: 185 QKDFSDYLFHCVQIMRVQVPADTDLNHYFEVMNNRGEQLEKHEVLKSKMMSTLEKAD-YAVLQSVWEACSNMERYVQMGFTRTQRDRLFGQQDWGVLKPSNYSELQGMLAEDIFQDDTTQALPLSHLICKPPSAKDQKIDKQNQGERSEETPERFNSVINFPNFLLQVLRVTTGQDIPLDDKRLITSFQTHLLSSADAAERVRRFTYNLLKCKLLLDHYVIKREYTGNTDDWSLKRLKWQASNGSSDYVNTFGAEDSDSDTNRRVLMLLSALHVSTPTMVYKHWLSAALHFLFRSEKVEAQPYLCHLESVSRCFVYDRFLAYGDGAEYYDIIFRREGKLSSRRWSDIDEKKLRFGNIENNFVFNYLDYLLWCKYYRNNPGL-RKYSFSFRSSVEHYYPQNPMPGIDKLDQDIVNSFGNLCLISHSKNSRLSNFSPKSKEEYYSKGEIDSIKQWLMMNANTPWEAGEIQQHNDEMIEVFKRDLES 666
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: A0A2N3H339_9PSED (DUF262 domain-containing protein n=8 Tax=Pseudomonas TaxID=286 RepID=A0A2N3H339_9PSED) HSP 1 Score: 532 bits (1370), Expect = 1.720e-181 Identity = 275/491 (56.01%), Postives = 344/491 (70.06%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDD-PEERSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSN-----DYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEA---KLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q+ A +LF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L + P ++ LH +WEACANMERY+QMGFTP QR +FG+KDWG +P NF E+ L T K + L+DIISRP + E K EEAPERFN+VINFPNFLLHVLRV T D+PLDDKRL++ F+ ++L Q D VK F F+LL+CKYLYDQ++IKREF DGWSLKR KW + Y+NTFG+ NRR+LMLLSALHVSTPT+VYKHWLNAAL+YL+ AE + +AYL+ +ESV + FV+DRFL+ +YF +IY G Q++ D +LRFGNI NNL+FN+LDYLLWL++ S E VK YEF+FRSSVEHYYPQ P+ G + L L+ FGNLCLISH KNSRLSN TP+ K+ YL +DSVKQ LMM +W P I +HH++M++V + L +
Sbjct: 167 VSPQEFADFLFRYVQIMRVKVPADTDLNHYFEIMNNRGEQLEKHEVLKARMMETLQECPHSQNCLHTLWEACANMERYVQMGFTPGQRSSVFGEKDWGRLVPDNFAELTAALQRTHEVGFKAGAELSLTDIISRPPVIAE---KTDNGEEAPERFNTVINFPNFLLHVLRVDTQADIPLDDKRLLDLFETHVLKQPDPAAAVKRFTFNLLRCKYLYDQYVIKREFIQGEDGWSLKRFKWNDGGKAGGAGRGSYVNTFGEEEGSEGINRRILMLLSALHVSTPTLVYKHWLNAALHYLFHAEQIEAQAYLQQMESVAKAFVFDRFLAAEAGLEYFAMIYGNQGVCQSRREDVTAATLMPRLRFGNIENNLVFNFLDYLLWLEHGKS--EPVKFYEFTFRSSVEHYYPQKPLPGIDPLAEDDLHSFGNLCLISHEKNSRLSNFTPEQKKAFYLKNTLDSVKQHLMMQPETWDVPAIREHHQQMIDVLLNSLAS 652
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: UPI0010A2A976 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI0010A2A976) HSP 1 Score: 528 bits (1361), Expect = 3.940e-180 Identity = 276/494 (55.87%), Postives = 343/494 (69.43%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEE-RSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSL---QDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSN-----DYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEA---KLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q A +LF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L ++ ++ LH VWEACANMERY+QMG TP QR IFG+++WG F P NFDE+ L T D++ L II++P + QDE A +EAPERFN+VINFPNFLLHVLRV T D+PLDDKRL++ F+ ++L Q D VK F F LL+CKYL+DQF+IKREF DGWSLKR KW + Y+NTFG+ + NRR+LMLLSA HVSTPT+VYKHWLNAAL+YL+ +E V KAYL+++ESV + FV+DRFL+ +YF IIY G Q D E +LRFGNI NNL+FN+LDYLLWL++ S E VK YEF+FRSSVEHYYPQ P+ G E L L+ FGNLCLISH KNSRLSN TP+ K+ YL +DSVKQ LMM +W P I +HH++M++V + L +
Sbjct: 167 VSAQQFADFLFRYVQIMRVKVPADTDLNHYFEIMNNRGEQLEKHEVLKARMMEKLQGCQQSQNCLHTVWEACANMERYVQMGLTPGQRSSIFGEQNWGRFEPANFDELSAALHRTQEFVDRQDALLTLEQIIAKPPVGVEQDE------AGDEAPERFNTVINFPNFLLHVLRVATQADIPLDDKRLLDTFEAHILKQPDPAAAVKRFTFSLLRCKYLFDQFVIKREFIKGADGWSLKRFKWNDGGERSRAGRGSYVNTFGEEEGNEGINRRILMLLSAFHVSTPTLVYKHWLNAALHYLFHSEQVEAKAYLQHMESVAKAFVFDRFLAAEAGLEYFAIIYGNKGVCQTCREDVTAETLSPRLRFGNIENNLVFNFLDYLLWLEHGKS--EPVKSYEFTFRSSVEHYYPQKPLQGIEPLDEDDLHSFGNLCLISHEKNSRLSNFTPEQKKAFYLKNTLDSVKQHLMMQPETWDVPAIREHHQQMIDVLLNSLAS 652
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: A0A1H9P852_9PSED (Uncharacterized protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A1H9P852_9PSED) HSP 1 Score: 528 bits (1360), Expect = 5.580e-180 Identity = 279/491 (56.82%), Postives = 337/491 (68.64%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEE-RSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNS-----NDYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDE---AKLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q A +LF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L ++ ++ LH VWEACANMERY+QMGFTP QR IFG+KDWG F NFDE+ L T A KE L DII P L E K + EEAPERFN+VINFPNFLLHVLRV T D+PLDDKRL++ F+ ++L Q+D VK F F LL+CKYL+DQ++IKREF DGWSLKRLKW S Y+NTFG+ NRR+LMLLSA HVSTPTMVYKHWLNAAL+YL+ A V +AYL+++ESV + FV+DRFL+ +Y IIY G Q E ++L FGNI NNL+FN+LDYLLWL++ AS E VK YEF+FRSSVEHYYPQ P+ G L PK LN FGNLCLISH KNSRLSN TP K++ Y +DSVKQ LMM + W I +H+++M+ V L +
Sbjct: 167 VSAQQFAEFLFRYVQIMRVKVPPDTDLNHYFEIMNNRGEQLEKHEVLKARMMEKLQGCQQSQNCLHTVWEACANMERYVQMGFTPGQRSSIFGEKDWGRFELANFDELTVALHRTQEVAYKEGASLSLKDIIEGPPLNAE---KPDSGEEAPERFNTVINFPNFLLHVLRVDTQEDIPLDDKRLLDTFEAHVLKQSDPAVAVKRFTFSLLRCKYLFDQYVIKREFIKGADGWSLKRLKWNDSGGRIRAGRGSYVNTFGEEEGSEGVNRRILMLLSAFHVSTPTMVYKHWLNAALHYLFHANQVEAQAYLQHMESVAKAFVFDRFLALEAGLEYSAIIYENKGVCQTHRESLAAEMLESRLSFGNIENNLVFNFLDYLLWLEHEAS--EPVKSYEFTFRSSVEHYYPQKPLQGIAPLAPKDLNSFGNLCLISHEKNSRLSNFTPGQKREFYQKNTLDSVKQHLMMKAEPWDAFAIREHYQQMMNVLLKSLAS 652
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: UPI00178164F9 (DUF262 domain-containing HNH endonuclease family protein n=9 Tax=Pseudomonas TaxID=286 RepID=UPI00178164F9) HSP 1 Score: 523 bits (1347), Expect = 5.310e-178 Identity = 274/492 (55.69%), Postives = 345/492 (70.12%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEE-RSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGND-VPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSND-----YLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDE---AKLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q A YLF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L D E+ ++ LH VWEACANMERY+QMGFTP QR +FG+KDWG F +FD ++ L T + +E L II++ + DE + +++APERFN+VINFPNFLLHVLRV T D +PLDDKRL++ FD ++L Q D + VK F F LL+CKYL+DQ++IKREF +DGWSLKR KW + Y+NTFGD + +NRR+LMLLSA HVSTPT+VYKHWLNAAL+YL++A V +AYL+++ESV + FV+DRFL + DYF +IY G Q + E ++L FGNI NNL+FN+LDYLLWL++ AS E VK YEF+FRSSVEHYYPQ P+DG +L LN FGNLCLISHSKNSRLSN P AK + Y IDSVKQ+LMM + W + I +H K+M V + L +
Sbjct: 167 VSPQQFAEYLFRYVQIMRVKVPADTDLNHYFEIMNNRGEQLEKHEVLKARMMEQLQDCEQSQNCLHAVWEACANMERYVQMGFTPDQRSSLFGEKDWGTFELADFDALRVALHRTQKATTREGCALTLDQIIAKAPVGDESKE---TSDDAPERFNTVINFPNFLLHVLRVDTQADSIPLDDKRLLDTFDAHVLKQPDPVAAVKRFTFSLLRCKYLFDQYVIKREFIKGSDGWSLKRFKWNDGGERSQVGRGSYVNTFGDEDGNEGSNRRILMLLSAFHVSTPTLVYKHWLNAALHYLFKARQVEAQAYLQHMESVAKAFVFDRFLVAEKGLDYFAMIYTNRGVCQTRRESIAAETFESRLTFGNIENNLVFNFLDYLLWLEHGAS--ERVKSYEFTFRSSVEHYYPQHPLDGQVQLDTDTLNSFGNLCLISHSKNSRLSNFMPSAKNEFYQNNSIDSVKQYLMMETKPWDDIAIREHSKQMNNVLLNSLAS 653
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: A0A658GAZ7_9PSED (DUF262 domain-containing protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A658GAZ7_9PSED) HSP 1 Score: 519 bits (1336), Expect = 2.360e-176 Identity = 272/491 (55.40%), Postives = 337/491 (68.64%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEE-RSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSN-----DYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEA---KLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q A +LF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L ++ ++ LH VWEACANMERY+QMGFTP QR IFG+ WG P NFDE+ L + A KE K L DI++RP + E K EEAPERFN+VINFPNFLLHVLR T D+PLDDKRL++ F++++L + D VK F F LL+CKYL+DQ++IKREF DGWSLKR KW + Y+NTFG+ NRR+LMLLSA HVSTPT+VYKHWLNAAL+YL+ AE V +AYL+ +ESV + FV+DRFL +YF +IY G Q + D + E +L FGNI NNL+FN+LDYLLWL++ AS E VK YEF+FRSSVEHYYPQ P+ G L + LN FGNLCLISH KNSRLSN P AK++ Y IDSVKQ LMM + W I +H+++M++V L +
Sbjct: 167 VSAQQFADFLFRYVQIMRVKVPADTDLNHYFEIMNNRGEQLEKHEVLKARMMEKLQGCQQSQNCLHTVWEACANMERYVQMGFTPGQRSSIFGEHTWGRLEPANFDELTVALHRSQEVAYKEGAKLSLMDIVARPPISAE---KTDNGEEAPERFNTVINFPNFLLHVLRADTQADIPLDDKRLLDTFEEHVLRKTDPAAAVKRFTFSLLRCKYLFDQYVIKREFIKGADGWSLKRFKWNDGGKAGGAGRGSYVNTFGEEDGSEGINRRILMLLSAFHVSTPTLVYKHWLNAALHYLFHAEQVEAQAYLQQMESVAKAFVFDRFLVPVAGLEYFAMIYGNKGVCQTRREDVMAETLKPRLSFGNIENNLVFNFLDYLLWLEHGAS--EPVKSYEFTFRSSVEHYYPQHPLPGHAPLDAEPLNSFGNLCLISHDKNSRLSNFMPSAKKEFYQNNSIDSVKQHLMMKTEPWDAHAISEHYQQMMDVLLKSLAS 652
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: UPI001E4F7966 (DUF262 domain-containing HNH endonuclease family protein n=1 Tax=Pseudomonas wenzhouensis TaxID=2906062 RepID=UPI001E4F7966) HSP 1 Score: 516 bits (1330), Expect = 1.900e-175 Identity = 270/491 (54.99%), Postives = 339/491 (69.04%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLDDPEE-RSVLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVL--TDRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKWQASNNSN-----DYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYLYQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEAK---LRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDLRT 1440
++ Q A +LF VQIMRV+VP DTDLNHYFE+MNNRGEQLEKHEVLK+R+M L ++ ++ LH VWEACANMERY+QMGFTP QR IFG+++WG F P NFDE+ L T D++ L II+R S+ E+ + +EAPERFN+VINFPNFLLHVLRV T D+PLDDKRL++ F+ ++L Q D VK F F LL+ KYL+DQF+IKREF DGWSLKR KW + Y+NTFG+ + NRR+LMLLSA HVSTPT+VYKHWLNAAL+YL+ AE V +AYL+Y+ESV + FV+DRFL+ +YF +IY G Q + D EA L FGNI NNL+FN+LDYLLWL+++ E VK YEF+FRSSVEHYYPQ P+ G L + LN FGNLCLISH KNSRLSN P AK++ Y IDS+KQ LMM + W I +H+++M++V L +
Sbjct: 167 VSPQQFADFLFRYVQIMRVKVPADTDLNHYFEIMNNRGEQLEKHEVLKARMMEKLQGCQQSQNCLHTVWEACANMERYVQMGFTPGQRSSIFGEQNWGRFEPANFDELSAALHRTQEFVDRQDAPLTLEQIIARTSVGVEQDK---TGDEAPERFNTVINFPNFLLHVLRVDTQADIPLDDKRLLDTFEAHILKQPDPAAAVKRFTFSLLRSKYLFDQFVIKREFIKGADGWSLKRFKWNDGGERSRAGRGSYVNTFGEEEGNEGINRRILMLLSAFHVSTPTLVYKHWLNAALHYLFHAEQVEAQAYLQYMESVAKAFVFDRFLAAEAGLEYFAMIYGNKGVCQTRGEDVTAEALKPLLSFGNIENNLVFNFLDYLLWLEHQGD--EKVKPYEFTFRSSVEHYYPQHPLPGHAPLDVETLNSFGNLCLISHDKNSRLSNFMPTAKKEFYQNNSIDSLKQHLMMKAEPWDAQAIRKHYQQMMDVLLKSLAS 652
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Match: E6W0T5_DESIS (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=E6W0T5_DESIS) HSP 1 Score: 515 bits (1326), Expect = 1.230e-174 Identity = 274/506 (54.15%), Postives = 349/506 (68.97%), Query Frame = 1
Query: 1 IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRLMSVLD---DPEERS----VLHQVWEACANMERYIQMGFTPRQRDRIFGKKDWGAFIPKNFDEMKQVLT--DRKADKETEKRRLSDIISRPSLQDERQRKQGAAEEAPERFNSVINFPNFLLHVLRVTTGNDVPLDDKRLINAFDDYMLNQNDVIERVKNFVFDLLKCKYLYDQFIIKREFTGNTDGWSLKRLKW-----QASNNSNDYLNTFGDGADDSNANRRVLMLLSALHVSTPTMVYKHWLNAALYYL----------YQAETVTFKAYLKYLESVTRCFVYDRFLSRHEEADYFEIIYRRNGQLQAKNWDAIDEA----KLRFGNIANNLIFNYLDYLLWLKYRASSQEVVKKYEFSFRSSVEHYYPQTPIDGAERLPPKRLNLFGNLCLISHSKNSRLSNLTPKAKQDHYLAGGIDSVKQWLMMSSPSWGEPEIVQHHKEMLEVFQHDL 1434
++E + YLF +VQIMRV VP DTDLNHYFE+MNNRGEQLEKHEVLKSRL+ VL+ D ER+ H+VWEACANME+Y+Q GF P QR +FG++DWG F+P++FD++++ + R + L+DI+S D G +E ERFNSVINFPNFLLHVLRV+TG D+PLDDKRLI F++ +L ++D E VK F F LLKCK+LYD +I+KREF TDGWSLKR KW + + Y+NTFG+ + NRR+LMLL+A HVSTPT+VYKHWLNAAL YL Y+ E + YL YL+ R FV+DRFL H ++ Y++IIY R G+ +++ D + EA +L FG I NNL+FNYLDYLLWLK++ S V+K YEF+FRSSVEHYYPQ P+ G + LP LN FGNLCLISHSKNSRLSN P+AK+++Y IDS+KQ+LMM+ W E I QH++ M EVF+ DL
Sbjct: 159 VSEAAFSGYLFEKVQIMRVTVPHDTDLNHYFEIMNNRGEQLEKHEVLKSRLLEVLNRIPDETERTKSKDCFHRVWEACANMEKYVQAGFAPEQRHELFGRQDWGQFLPQDFDDVQEAVAKGSRVGGGDVVAMTLTDILSHVGQADGES--SGGDDEVSERFNSVINFPNFLLHVLRVSTGRDIPLDDKRLIAIFEEELLKKDDPDE-VKEFGFALLKCKFLYDHYILKREFIRGTDGWSLKRYKWSDGGQKRRSEKGYYVNTFGEENGQDDINRRILMLLAAFHVSTPTLVYKHWLNAALSYLFRKGKKNQSLYRGEELAAGHYLGYLKRAARAFVFDRFLGGHSDSGYYQIIYDRYGKCKSQP-DVLSEANLSSRLSFGEIENNLVFNYLDYLLWLKHK-DSDPVIKAYEFTFRSSVEHYYPQNPLPGHDTLPADTLNSFGNLCLISHSKNSRLSNFMPQAKKEYYRNNTIDSIKQYLMMNEDPWDEVAINQHYQAMREVFRDDL 659 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12459.1532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12459.1532.1 >prot_E-siliculosus-1a_F_contig12459.1532.1 ID=prot_E-siliculosus-1a_F_contig12459.1532.1|Name=mRNA_E-siliculosus-1a_F_contig12459.1532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=480bp IAEQDLARYLFSQVQIMRVEVPEDTDLNHYFEVMNNRGEQLEKHEVLKSRback to top mRNA from alignment at E-siliculosus-1a_F_contig12459:8..1447+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12459.1532.1 ID=mRNA_E-siliculosus-1a_F_contig12459.1532.1|Name=mRNA_E-siliculosus-1a_F_contig12459.1532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1440bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12459:8..1447+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12459:8..1447+ >mRNA_E-siliculosus-1a_F_contig12459.1532.1 ID=mRNA_E-siliculosus-1a_F_contig12459.1532.1|Name=mRNA_E-siliculosus-1a_F_contig12459.1532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2880bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12459:8..1447+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |