mRNA_E-siliculosus-1a_F_contig1244.1522.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1244.1522.1
Unique NamemRNA_E-siliculosus-1a_F_contig1244.1522.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 2.790e-61
Identity = 227/449 (50.56%), Postives = 269/449 (59.91%), Query Frame = 2 
Query:  110 MEGDAGSGSARPG--------------------------------PDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMR-DSNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLPSSLQEIDLXXXXXXXXXXXVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EDHVDNTVTVYADFXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEGLRLLDHKDGCGTKES-LLRGIEWPTALRHLTVIKGSNLDGVTIPSVVQVDF 1345
            MEG+ GSGSARPG                                P +  CL+ LI+A NE    T   K WYTSTKELQLASL+FC  CR  QT+HLNV+ + PRRLLA+ D PP HPKR C TR+P LR+R VTWNM TA +LR PIFAMTD + L FG  F  +LEAV WP  L+T++   DS F++ +E +++P  L+ +                          G  FNQPI     P+SLQ++        XXXXX  XXXX    XXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++   N + ++A+F                 LG  FRQSLQGLGTW+PNLE L LL H  G G  +S  LR IEWP  LRHLT+++G+++DGV IP  VQV F
Sbjct:    1 MEGEDGSGSARPGIRNSVSGSDARKNRRNGGVLMRPSTILRVQKGPTRKFCLEALIVALNE----TCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTF------------------------GGDFNQPIERVKFPASLQQLIFRTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGNRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNGMVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLL-HYHGSGLGDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQVLF 420
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.950e-56
Identity = 198/397 (49.87%), Postives = 231/397 (58.19%), Query Frame = 2 
Query:  146 GPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRDSNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLPSSLQEIDLXXXXXXXXXXXVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHVDNTVTVYADFXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEGLRLLDHKDGCGTKESLLRGIEWPTALRHLTVIKGSNLDGVTIPSVVQ 1336
            GP ++SCL  +I+A NE    T   K WYTSTKE QLASLEFC  CR +QTL L V++RTPRRLLAA D PP HPKR CGTR+P LRAR VTW++ TA  LRN I++M D+D L F R F+ +LEAVAWPRRLKT+++         E  +F                                  S F+QPI G   P +L+++       XXXXXX                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          V   V V + F  X             TLG++FRQSLQ LGTW+PNLE   LL H    GT++S LRGIEWP  LR L V + S+L GV IPS V+
Sbjct:    6 GPARDSCLNAIIVALNE----TSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGI-----AEVAKFHDK-------------------------------SLFDQPIAGVVWPDTLEQLTFGLFLNXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVCFGVRQEVLGDVVVTSKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLLHHIHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.530e-51
Identity = 245/399 (61.40%), Postives = 270/399 (67.67%), Query Frame = 2 
Query:  221 KGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMR-DSNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLPSSLQEIDLXXXXXXXXXXXVWXXXXLKL----------------------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHVDNTVTVYADFXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEGLRLLDHKDGCGTKESLLRGIEWPTALRHLTVIKGSNLDGVTIPSVVQVDFL 1348
            K WYTSTKELQ ASLEFC  CR YQTL L V+ +TPR LLAA D P  H KRPC TR+P LRAR V WNM TA EL++PIFA+ D  RL FG  F+G+LE+VAWP+RLK ID    S FN+P+E + FP SL  + LS+ XXXXXXXXXXXXXX                             XXXXXXXXXXX  XXXX                          X    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  E    +   ++++FXXXXXXXXXXXXXXX TLG  FRQSLQGLGTWIPNLE    LDH +G G ++SLLRGIEWPT LR L V + S LDGV IPS V+V  L
Sbjct:    5 KRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAIMFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHSNGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEVSRL 403
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.230e-48
Identity = 97/162 (59.88%), Postives = 112/162 (69.14%), Query Frame = 2 
Query:  146 GPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTID-MRDSNFNKPLERMRFPASLETIVL 628
            G   N CL  LI+A NE    T     WYTSTKELQ ASLEFC  CR Y  +HL V+ + PR LLAA D PP HPKR C TR+P LRARSVTWNMR A EL NPIFA+TD D L FG  F G+LEAV WPRRLK I+ +  S FN+PLE +++P SL+ +VL
Sbjct:    8 GLTHNPCLSSLIVALNETCDGT----SWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVL 165
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 6.560e-46
Identity = 101/194 (52.06%), Postives = 120/194 (61.86%), Query Frame = 2 
Query:  146 GPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRDSN-FNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPI 724
            GP ++SCLK L +A NE    T   K WYTSTKELQLASLE C  CR YQTLHL V+A TPRRLLAA D P  HPKR CGTR+P LRAR  TWN+ TA  +R  IFA  D D L FG+ F G+L+A+ WPRRLKTI+ R S+  N+ L+ + +PASL  +                        C+G  FNQPI
Sbjct:  130 GPTRSSCLKTLTVALNE----TCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKV------------------------CLGHDFNQPI 295
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.680e-45
Identity = 95/161 (59.01%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:  143 PGPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRD-SNFNKPLERMRFPASLETI 622
            PGP  N+CL  + +A     GET   K WYTSTKELQLASLEFC  CR YQTLHL V+ R PR LLAA D PP HPKR    R+P LRAR VTWNM TA ELR+PIFA+ D D L FG  F+G+LEAV WPRRL++I   + S FN P++ +++PASL+ +
Sbjct:   29 PGPTSNTCLNAIYVAL----GETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.370e-43
Identity = 217/409 (53.06%), Postives = 242/409 (59.17%), Query Frame = 2 
Query:  158 NSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRDSNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLP--------------------SSLQEIDLXXXXXXXXXXXVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHVDNTVTVYADFXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEGLRLLDHKDGCGTKESLLRGIEWPTALRHLTVIKGSNLDGVTIP 1324
            +S  K LI+A NEM       K WYTSTKELQLASLEFC  CR YQ L L V+A+TPR LLAA D PP H KRPC TR+P LRAR V WNM TA ELR  +FA+ D + L FG  F G+LEAV WP  LK I    S FN+        ASL+ + L   XXXXXXXXXXXXXX                                         SSL+E                XXXX    XXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +  +N V + A F                TLG  F++SLQGLGT +PNLE   LLDH++G G+++SL RGIEWP  LRHL V   S+LDGV IP
Sbjct:   15 SSGSKDLILALNEMCD----GKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQXXXXXXXXASLQKLDLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLKE-----------DVEXXXXXXXXXXXXXXXXXXEWATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHDGEGFENAVMLSA-FNQRVDMCEWPVSMRRLTLGHKFKESLQGLGTRMPNLEAFHLLDHRNGSGSEDSL-RGIEWPKVLRHLVVFSNSSLDGVVIP 406
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.370e-40
Identity = 133/399 (33.33%), Postives = 160/399 (40.10%), Query Frame = 2 
Query:  143 PGPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRDSNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLPSSLQEIDLXXXXXXXXXXXVWXXXXLKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHVDNTVTVYADFXXXXXXXXXXXXXXXXTLGEHFRQSLQGLGTWIPNLEGLRLLDHKDGCGTKESLLRGIEWPTALRHLTVIKGSNLDGVTIPSVVQV 1339
            PGP ++SCL  L+IA NE    T   + WYTSTKELQLASLEFC  CR YQTLHL V+A+ PRRLLA  D PP HP+  C TR+P LRAR VTW MR A EL  PIFAMTD D L FG   + +LEA      L+    RD         + +  S    V S G                +   +   ++                             W     +                                                                            DN V V                     LG+ F+QSLQGLGTW+PNLE LRL D +D     +SLL GI WPT LR L V + + +DGVTIPS V+V
Sbjct:  106 PGPSRSSCLNALVIALNE----TCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG---ETSLEA------LRLWHGRDGWKRSSFSFLHYSTSRS--VWSSGQHLCRRL-------NSVAVVIARAYD-----------------------------WICDRCRRKR-------------------------------------------------------------------------DNDVLVLRP---THRQPWLAYVFASTPLGDDFKQSLQGLGTWMPNLEVLRLFDFRDPDFGNDSLLLGIGWPTGLRQLAVYECTKMDGVTIPSTVEV 377
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 9.480e-34
Identity = 92/213 (43.19%), Postives = 117/213 (54.93%), Query Frame = 2 
Query:  134 SARPGPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCG-TRLPLLRARSVTWNMRTARELRNP--IFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDMRD-SNFNKPLERMRFPASLETIVLSEGXXXXXXXXXXXXXXRQLIFCVGSTFNQPITGGFLPSSLQEI 760
            S  PGP ++SCL  +++A +E    T   K WYTSTKELQLASL FC  CR +QT+HL V+   PRRLLAA D PP   +     TR P   A S       +  +  P  +FAMTD D L FG  F+GNLEAVAWPR LKTID+   SNF KP++ + +P SL+T+                          G  F QPI    +P+SLQ++
Sbjct:  126 STAPGPGRSSCLNAIVVALSE----TCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSA-SCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTLEF------------------------GWEFYQPIYRVNVPASLQQL 309
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.350e-16
Identity = 66/167 (39.52%), Postives = 88/167 (52.69%), Query Frame = 2 
Query:  137 ARPGPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLASLEFCKVCRTYQTLHLNVEARTPRRLLAATDTP--PLHPKRPCGTRLPLLRARSVTWNMRTARELRNPIF-AMTDSDRLVFGRGFKGNL-EAVAWPRRLKTIDMRDSNFNKPLERMRFPASLETIV 625
            AR GP +  CL  LIIA N+  G  W     YTST +LQLASLE C  CR+   L LNV+  TP RL   T T       KR   TR+P++RAR+VTW +     LRN    A ++      G GF  +L   + WP +L  + +    FN+ +E +  PAS+  +V
Sbjct:    5 ARAGPSR--CLDALIIALNQASGGEW-----YTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKL-PGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGL-GPGFNRSVEHLSLPASVRFLV 162
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1244.1522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JRF9_9PHAE2.790e-6150.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE1.950e-5649.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE2.530e-5161.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH81_ECTSI1.230e-4859.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPY7_9PHAE6.560e-4652.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE3.680e-4559.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE4.370e-4353.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI1.370e-4033.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUL5_ECTSI9.480e-3443.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT95_ECTSI4.350e-1639.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1244contigE-siliculosus-1a_F_contig1244:3846..16783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1254
Model size2591
Exons4
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1244.1522.1prot_E-siliculosus-1a_F_contig1244.1522.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1244 8367..11595 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927766.7927885-UTR-E-siliculosus-1a_F_contig1244:3845..40001622927766.7927885-UTR-E-siliculosus-1a_F_contig1244:3845..4000Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 3846..4000 -
1696318671.2642062-UTR-E-siliculosus-1a_F_contig1244:3845..40001696318671.2642062-UTR-E-siliculosus-1a_F_contig1244:3845..4000Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 3846..4000 -
1622927766.8138309-UTR-E-siliculosus-1a_F_contig1244:7293..83661622927766.8138309-UTR-E-siliculosus-1a_F_contig1244:7293..8366Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 7294..8366 -
1696318671.2737064-UTR-E-siliculosus-1a_F_contig1244:7293..83661696318671.2737064-UTR-E-siliculosus-1a_F_contig1244:7293..8366Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 7294..8366 -
1622927766.8787863-UTR-E-siliculosus-1a_F_contig1244:11595..116231622927766.8787863-UTR-E-siliculosus-1a_F_contig1244:11595..11623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 11596..11623 -
1696318671.3136349-UTR-E-siliculosus-1a_F_contig1244:11595..116231696318671.3136349-UTR-E-siliculosus-1a_F_contig1244:11595..11623Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 11596..11623 -
1622927766.8936937-UTR-E-siliculosus-1a_F_contig1244:16702..167831622927766.8936937-UTR-E-siliculosus-1a_F_contig1244:16702..16783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 16703..16783 -
1696318671.323774-UTR-E-siliculosus-1a_F_contig1244:16702..167831696318671.323774-UTR-E-siliculosus-1a_F_contig1244:16702..16783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1244 16703..16783 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927766.843057-CDS-E-siliculosus-1a_F_contig1244:8366..95831622927766.843057-CDS-E-siliculosus-1a_F_contig1244:8366..9583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1244 8367..9583 -
1696318671.2905636-CDS-E-siliculosus-1a_F_contig1244:8366..95831696318671.2905636-CDS-E-siliculosus-1a_F_contig1244:8366..9583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1244 8367..9583 -
1622927766.863263-CDS-E-siliculosus-1a_F_contig1244:11558..115951622927766.863263-CDS-E-siliculosus-1a_F_contig1244:11558..11595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1244 11559..11595 -
1696318671.3038185-CDS-E-siliculosus-1a_F_contig1244:11558..115951696318671.3038185-CDS-E-siliculosus-1a_F_contig1244:11558..11595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1244 11559..11595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1244.1522.1

>prot_E-siliculosus-1a_F_contig1244.1522.1 ID=prot_E-siliculosus-1a_F_contig1244.1522.1|Name=mRNA_E-siliculosus-1a_F_contig1244.1522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=418bp
MEGDAGSGSARPGPDQNSCLKVLIIAFNEMWGETWVAKGWYTSTKELQLA
SLEFCKVCRTYQTLHLNVEARTPRRLLAATDTPPLHPKRPCGTRLPLLRA
RSVTWNMRTARELRNPIFAMTDSDRLVFGRGFKGNLEAVAWPRRLKTIDM
RDSNFNKPLERMRFPASLETIVLSEGFNQPIDRVEFPASLRQLIFCVGST
FNQPITGGFLPSSLQEIDLGEQFNQPIEDVVWPPSLLKLHLGYEFDQPIQ
RVVFPPSLQELTVEGSFNQPIEGVSWPDSLQRLAFGFCFNRSIDNVRWPA
SLQEITFASCEDHVDNTVTVYADFNQSICSSVWPASLRRLTLGEHFRQSL
QGLGTWIPNLEGLRLLDHKDGCGTKESLLRGIEWPTALRHLTVIKGSNLD
GVTIPSVVQVDFLEQVL*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1244:3846..16783-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1244.1522.1 ID=mRNA_E-siliculosus-1a_F_contig1244.1522.1|Name=mRNA_E-siliculosus-1a_F_contig1244.1522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=12938bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1244:3846..16783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACGTTCCTTTCCTTGCCAGCAGCTGCCGAGCAAGGGGGAAAGGAAAGGA
CGGGGAGAGGGAAGGTGGAAACTAGCGAGAGGTGAGGTCTACCTCTAGTG
TGTGGCAGTGCTGATTCTGTCTAAGCCCGTAAGCCCGTAAGCCCCGCATT
GTCGTCTGATTACCAGACAGGTGTCTACCGTCTATCGCCTTTTGACGCGG
TGCTCTAAATCAGATTGGAAGATGAGCCCTGCTGTTGTACAGACGTACGT
ATTCGTAAAAGTTGTCGTCACGATTGGTGTGGCCTCAATGTTGTAGAAAG
CATGCACCTGTAGACGCCATGGGCTGCCCACGAGGCCCCACGTGTTGGTT
TGTCAGTGTTTCAGTCGGTTGCCATGCTCCACTGCTGAAAAAAAACCAAA
AAAAACAGAGGTACTCCGAGAAGCAACGAGACCCGCTTACGTCCACCCGA
GTCCGAGGCGTCCAGCAGTGGACTACCCCAACACCTATCTAGGGAACCAA
GATTGATCAATTTATCACTTCCATCCACTGCTGTAGAGTTCGAGCTGGTC
GCACAACCACCACGGCTCGCCTTGTGTCGTTCGTGTACACACACTACAGC
AGTGGGCTTCTCAGAGCATGGTGGTACACAGTGTCAAGCCGTGACACAAG
ATGAAAGCAAAGCGAACGTCATCAGGTGACAGTTCCCAAGCTCGGACAGC
TCACAAACCTGAGGTGTGTTTGACTCGAGGGATCAGCAAACCTCAACGAA
CCCAAAATACTTTTATTCCAAAGCTGTACCGTCTCAATGCGGCATGACCC
CACTGCTGTGCGCCCGGCCATAGCAAAGGATTTCGACGAGCCCACCACAT
GACCAATCGCCGCCAAATTTGGAGACAAGACAAACTGAGCGCCAGAGGTG
ATACGTCTTGAGAATCCGCTTGACTTTATTTTTCGTGTTTTGAACGTGGC
AATGAAAACGCATTCGAGTGTTGTCGAATACAACGACAACACTCCGTGTT
GGAAAATCCTGCCATACAATTTTTTCATTTTAACATTTTCTCGAGAGCGC
ACCAGCAATTTCTCTCGGGCTCTCACAGCGCTGCATTTCGGCTCTTGGAA
GCGCTCACAGGCCTGCATTTCTCCAATCTTCATTTTCCCGTTTTTCCCGA
TTTCCCGCTTTTTTCATCTGTCACGTTTCCAATCTTCCTTCCTTTCGCAC
GCCTCTCACACGGGGCCTTTTTTATCTTCCTCTCTCGGTTGTCACACACA
CACCCATTCTTCACACATCCAGTCTGCTTTTGCCCGTTGCTCTCCACTGC
TGTATATCTTTCAACATCCACAACAACATTCAACTTTCCTTTTCGTTCCT
TTATGAAACTTGACTACTTACTTGCTGTAGCAATGCCCGCCCCTTTCATC
TGCTGCTGCTCTCAGCCATCCACACAATGTCATCACGTTTTACACCAGTC
AGTCTCTCTGTCTCCCCTCACACACCATCATCAGTCTGTCTCTCCCCTCT
CGCATGGCCCAGCACCATCTGTCCTGGGTCTTTGGGCGCTTCATGTTCCT
TTCATTCCACTTCTTCTCTTCGGAACGCTTCTCTTCCGAATTTCCCGGCA
AGGGGCGGGGTTTCTTCTCAGTTCCGACAATTGACTACTGTCAGTCAGCT
GCTCCACTATTTGAGACGTCGATGGACCCGTTGTGCATGGGTTATCTACA
CTACGGGTTCACCCCTCTCGCGTGTCCCACGTAGTAATAACTGCGCAACA
AACTATCTGTCTGTCGTCTCGTTGAAGTTTAATTTTCGCTTCTGTTCGGA
TCGACTCTCTTCGAAATTTCCCTGGCGAGGGGCGGGGTTTCTTAGGAAAT
AAATGTGTAGTATACATGAACAACAACAGCACAGTTCTGAGCGAGGCGGC
GAAAGCCGCCAGAATACGCCCTCTTTCTCTCTCTACAACAGCACGGTTCT
GAGCGAGGCGGCGAAAGCCGCCAGAGTTACGCCCTCTTTCTCTCTCTGCA
ACATTGTTTTGTTACTTGCTTGGGCTTATCGCATATCTCGGAATCGATCT
ACTGACCGGGGCGGCGAAAGCCGCCAGAGTACGCCCCCCCTCTCTCTCTT
TGTGCACTAAAAAGCCGTTTTTCATTTAGTTTCACTCTATATTGCTACCA
CCGCTAGCTAATCGCGTATCTTGGAATCGATCTACTGAGCGAGGCGGCGG
AAGCCGCCAGACCACCTTGTATATCTACAACCGATCTGCTCGTCGAGCAT
AGCTTTGCCTACTGAGGTTCATCGACGCGCCAACCAACAGCACACGGACA
TTCCAAGGCCGCAAACTCTCACCGAATGGCTCGACTCGTGTCGGCGCCTC
GTGGTATGCTTTGTAGGCAGGCTGTGAGTTCGGATTTACAGTCACATCCC
CTCGGTAGGCCCCCCCTTCCCGTCGGTGAATGTATCACCGTTGGAAAGGC
GCCCCCATATACACCACAGCCAATGTTAGGGGACAGACAGAGAAAGAGAG
AGAGAGAGAGAGAGCCGTGTGTGTCACATAGACAAGAGAGAAGAAAGGAA
GACGCCACAGAGCAAGGGCAAGGAGGACAAGCGGCGGCATCTCTAGCGTG
GTGTTGCCCATTATATCCAACGAGCTAAGTCAAACAAGCTCGAACTCTGG
CACAGAGGCGCTATTATGACACTTACGTCTTCCTATGCTACGACATGAAA
TTGTTTTAGTCTCAGAGAAAACAGGGGTACTCGGGTGCTGTTACTGTTTG
TTGTAGCTGGCCTCAGATCTGCGTCCCAGCGGTTACGCATTTGTTGCTGG
CGTTGCGCCTCCTTTTCTTCTCGCTTGTATGAATCTCGCGCGAATGAAGT
CGCAGCTGTTGTGTTCCCCCTTCTCCTGGAGAAAACCATGGGATGGGGTA
AAGGATCTCCTTCGGTTTTTGGGCACAAATGTCCAAGGGTATGTTCTGTA
GGGTCTGTAACTTTCTGTAGAGTATTGCAAGTTGTCACAGAACTCACAGA
ACTATCTGGGTAGGTATTGGAAGTCCACAGAAAACATCGGGTTCGTGAGA
AGGTCGTACAGCCACAGAACGTTTCGGGAAGGTTCACAAATCTGTACAGA
CGTTTTCTGTACTGTACTGTCGTGTCACAGAACTCACAGAAGTTTTCTGT
AGGGTATTGAAAGTGCCACAGATCTCACAGAAATATCCGGTACTGTATCG
CAAGTGCCACAGAACTCAACAAAAATCGGGTTTGTGCGAAGGTCGTACAG
AACTCACAGAACGTAGCGGGTAGGTTAACAAATGTTTACAGACGTTTCTG
TAGGGTATTGGAGAGTCACAGAACTCATAGGCGTTTTCTGTAGGGTATTG
GAAATGTCTGTGTAGCACGGCCATCCGGTATCGGAGCACGACCAAACCGG
TGTGACGAAGAATGCCCTATTTTTCTGTTTTTCTTCTTCCGCAGAAGACA
ACAGACAGTCAATCTGTGCCCTATAGGTCTTGGTTGGGTCGAAAACGAGA
ATTGCTCTGGCTTCCCGGTAATCAAATGGAGCCCTTGCATCGCGTTAGAA
CAGGCCGATATTTTGATTATTTTTTTTCCTCGTGGGATGAAGGGAAAGAA
GGTCGCGCTACTCTCTCCGCCGCTCAATATTACACCGGGTGGCACTGTAT
ATGTGCATAGATCTCCAACGGGGAGCCGAAATATCCACGGAGGTTAGGAC
GCATGCATTCACAGAGCCCTGGTGTGGCATAGCAGTTTTTCCCGCATAAA
TACAAGATGACCCTGCAGGGAACATACGCAAGACACCCTCTTGAGCTCTC
GAGCGCGGAGGAACCATGTTCTTCAAGTTAAACAAGCCAATATTTGGTTC
TGCCCCCGCCTTCGTTGTATGCTCTCTTCTGGGCCAGGCGGTATGTGGTG
GATTAATCCTATTTTCTTTACATGGCAACACTTTATTGCGCTATTTGAGA
GAGCGCGGTTGGTGTTCATCGCCCAGTTTAGTGATTTTCACGTGCTGTAT
CCCCCCCTACACATCTCACTCCGCACGACTGCGACAGCGCTCGGCAGGAA
CTTTACGACTGCAATCAGCGGTGCTAGTGCGATCACCGCCGCTTGTACCA
CACAGGCTGCGAGAGCGGCAGCCTCACGATAGTTTTCTGGAGGGAGGGGT
ATCACACCAAAATACACGCCCCTTGAACGTGTGGGCGCAGGACGGTAGGA
AATTCTTGCAGGCGGTGCTAGGGAACACCCTACAGTAGCTTCCACACGAT
TTCGGCCCCTGCAAGTGTGCGGTGAATGATATCAAACCAACACCTCCTCA
CCGGGCAACACAAGTTAGCACACGCACATAGTACAGCACCCGGTGATATA
TCTTTTAATAGCCAAGACCTTTACCCCGAGGTGCGTTAACTTTTGTCGTG
TACGGAACATGACCTAGAGAATATTCCGAGAGATGTAGCATACACCGGTC
TCTTGGGGGCAGGACCTTCCGCAACTTATTCGTACTGCCTTTTTTCTCGC
GGAAGATATGCACCGTTTAATTCTCCGTCTGTGACGCCTACGATTCAAGC
CCGCACAGAATGCATGCCCCCATCCTGGACAAGGTTGGACTATCACCCAG
GTTAACACGTTGCTTTGTACTTGAAGTAGCATGTTTTTTTTTCTTCTTCA
CTTCAAATCAACGCTCACAGCACTGTTGTGCCGTTTACTCCAACCCCCCG
TGGTCACACAGAAGAGAAGGGCCCTTCTCTACCCTCCCCTCCTGCGGTAC
GTTGCCTTCGATTTTTATTGCGAGAAGAAATCAGCACGCTCTCCCTCGGT
GTACACACGAACTAGCGCAATCCACTAGGCCAGGAGCGGAAGCGAGAGAA
AAACCCACTTTGCAAGAAATGCTCGCTTACGCCGGGATTCGAACCCCTGA
CCTCACCTCTAGAAGGTTTCGAGGATACCAACTAAATAGACCACCGGGAC
GACCGGTAGCAATGCTGGGGGTATTGTCACTGGGGAGGGCTTAAGACCTA
CTTCTGTCGTATAGTAGGTGATGGGGGGTATTCGTTCGTGCTACCTACCA
TGCCCTTTTTCGTCCTTGTCGCGATCACTTCATCGAGCATCACCGGCAAG
AGCGCTAAATCCTCCAACACGTGCTCTCCCCTCTTTTCGCGATGCTCTAT
CGTTGGAAAGGTCTAATACGAGTGACACACGGAGAGTCATGGAGGGAGAC
GCCGGTTCGGGGTCCGCAAGGCCTGGTGAGCAAAGAACGAGTTGTAATCT
AGTGGTGCAGACGACGTTTGTCCATTTTTTTCTCACTTCCACGGAAAAGA
TTCGAGCCTTCCCATGACCACATGTTTTTTGTATATATTCTTCAATTCAG
TCTCATGTGCTGCGCTTGCGCTCTGGTGAGCAGCGCCTTTTGGCAGGCTC
ACAATCGCAGCATGAACTTTGGTAGCTGGAAGGTTTTTCGCTTGTCCGAG
CATCTTCCGAATCCCGCGCGATCGACAGATATTTCATTTGAGCTTTCGCC
TAGCGATCCCCGGACCCGAACGTTTGTTTGTCCAGACGACATACAACTCC
GCAACGCGTTTCGAAGGAATAGCTCTTCATGAACTTGCAGCAATGTTCTT
TTTTTCATGCCCGTTGCTCGCATTCGTTTCATGGTTCGACGGCAATCTGA
CTGCGCTATTTTTGGAGGTATTCGTCATATCGAATATGTTTGGACGCGAC
AGCTGGACCTGAGCTTTTGTAGTGCATGAAAGGCTACGCCGTGCGCATGG
CACTCGATCAATGGCACTGAGAGAGCGGTCAGCCGGCAGTGTACCCGGCA
ATAGGCCAGGCCATGCATACCATGGAACGTATTTTTTGCAGTTTCCTTCT
TGAGACACGCGCGAGAATGATTTGAACGACTGGGTCGTAAGTGACAAAGC
ATTTCCCCTGGACCATACAGATAGCGCCCGCACTTGCGAATCTGACGGGT
ACAAACTTATTGCTCCCGGTTACGACTCGCTACACTTAAAAGCTTACATC
GCGGGAATTTGTAGCTCACATGAGGAACTACGGTATTAAAACCAGCCTCG
GCCAATTCTAGAGGCTCTCAAGTGCGGGCGCTATCTGTAGCGATGAAACA
GATATGTTGGAAACGCCTTCGAGGGAGATTGCCATATTCGAAGGTTGTCA
ACAAGGCTTATTTCCAACCCTAATCTCAGGCTGTTTAGTATAGTTCCAAG
CCCGAGCGGGCTCTGTCGAGACTTAGACATTGCGGGCCTTTGCCGGAAGG
GGGGTTGCGCTTTCAGTTCCGACTTCTGTTCCCATTCCTTCACCCACGCC
CACACGTGGTGGGTTCCTTGTTTGACGTCCGGGATTTGAGTAGTTTCCCC
TACTTTCACCGTGTTAAGGACACGCCGTAAGTCTTGCTTGCCTGTTGGCT
GGAACCTGTTTTGAAAGGTGGTGTGATTTATTCTCAATGAGGCGTTCAAA
GGTAGTTTTTCAGACACAATCTCAAAAATTCCTCCTTGACGCTTTGTGCT
TAGTTTGGCCGAGTGTGTCATGCCGTCGCGAACGTTTTTTCCACTCACCA
TGGGTAGTACTATTCTTCCAAGCATCATTTCTCTTTCAAGTCGGCCGAAA
CGCAACGGATACTTCTTCCGACAAACGTACGAAGGTGTGACGTAAACTGA
GGATGTTGCGCTCGAGAATGGGTTCGCCCAGCCCTTCGTGGAAAAATCTC
AATACCATCGGCGGGTAGTTGCGGTCAGCGTCGACCTGTGGTGCGAAATC
CTCAAGACGTTGGCCACCTTATCGTGCACAAGACAGCCGAAAACCTCACG
TTGTCACCCCAACGACCAAAAGTCACATTCACCCTACAGCCAATCCCTGT
CGTACATGTCCCTTACTTGGTAGTCAGCAAACCCAGGTCAAAGCTTCGAC
TTTTTCATGTGAAGTCTATTTGTTTTTTTTTGTGCAAGCAGGTTGGGTGT
GGAATGATTTGACCAAGAAAACGATGTGTATCGCCGACAAGGTGGAAAAA
AACCCAAAGATTTGGGGATATGAGGCAACCCCCGCCAGCACGTTTGTTTG
TACAAGAGCGTGGGCATTCCACCGTTTTCGTTTCCGGTTCTATCATGGCG
CCGTAGCAGTTACGTGGTTTGCGTTCAAGTGCTCAGAGGTGTCAAAAGAC
GCCATATTTTTCCCGACGAATACGCCCATACATCGTGCGTTCTGCCGCAG
GACCCGATCAGAACTCGTGCTTAAAGGTCCTCATCATTGCTTTCAACGAG
ATGTGGGGCGAGACGTGGGTTGCGAAGGGTTGGTACACGTCGACCAAGGA
GCTGCAGCTGGCGTCATTGGAGTTCTGTAAGGTGTGCAGAACTTATCAGA
CCTTGCACTTGAATGTCGAGGCAAGAACGCCACGCAGGCTGCTGGCCGCC
ACCGACACCCCCCCCCTGCACCCGAAGCGGCCATGTGGCACACGCTTGCC
GCTTCTACGAGCACGAAGCGTGACGTGGAACATGCGGACAGCTAGAGAAT
TGAGGAACCCCATCTTTGCAATGACGGACTCGGACCGCCTGGTGTTTGGC
CGTGGGTTTAAAGGCAACCTGGAAGCTGTGGCATGGCCGCGACGGCTGAA
AACGATCGACATGCGCGACTCCAATTTCAACAAGCCTCTCGAACGGATGA
GATTTCCGGCGTCGCTGGAGACGATCGTCCTCTCGGAAGGGTTCAACCAA
CCGATCGACCGTGTCGAGTTTCCGGCATCGCTACGGCAGCTAATATTCTG
CGTTGGTTCAACTTTCAACCAACCGATTACCGGAGGTTTTCTGCCTTCTT
CGCTGCAGGAGATTGACTTGGGCGAACAGTTCAACCAACCTATTGAAGAT
GTGGTTTGGCCGCCGTCCCTCCTGAAGCTCCATTTGGGCTACGAATTCGA
CCAGCCGATCCAACGGGTTGTTTTTCCGCCATCGCTGCAAGAGCTCACCG
TCGAGGGGAGCTTTAACCAGCCCATTGAGGGAGTTTCATGGCCAGATTCC
CTTCAGAGGCTCGCTTTTGGATTTTGTTTCAACCGGTCAATTGACAACGT
GAGATGGCCGGCGTCATTGCAAGAGATTACGTTTGCATCTTGCGAAGACC
ACGTCGACAATACGGTAACTGTGTATGCGGACTTCAACCAGAGCATCTGC
AGCAGTGTTTGGCCTGCATCGCTCCGGCGACTCACACTAGGCGAACATTT
CAGGCAGTCACTGCAAGGACTGGGAACTTGGATCCCCAACCTTGAGGGGC
TTCGTCTTCTTGACCATAAGGATGGTTGCGGTACCAAAGAAAGCCTTCTC
CGCGGAATCGAATGGCCTACGGCCCTTCGTCACCTGACTGTGATTAAAGG
ATCGAATTTAGATGGGGTCACAATTCCTTCAGTTGTACAGGTCGATTTCC
TGGAGCAGGTGCTTTGATTGTGATGAGAAAAGCAGTTTTTTCTGTAGTCA
GATGCCTCACTAACCTTCAGAGAAACTTTCGTGGGAAACGTATGGCAGTG
GAGGTAATGTTTGGAGACGTACAGAGTAGTCTAGTACCGTCACCACCAAT
CCGAGAGTTTGCATGGGCACCAAAAATTACTGTCACATAAGACGATTTTT
CTCACGTCGTTTGATGACACGAAGATGGCATCTCAACCTGTTCCTGTTGG
ATGTATTATTAGTCTACGCATACATGCGGCTGTTTCGGGTTTGATGAGGT
ATGTCCTCTTTGAGGTTTCTGTAGTGTTTTTCCTGATGCTAGGGGGAGGA
GGTTCGCGGGGAATCGGTTGTCAAAGCTATAGTCGACATTCCTTTGTTGG
TATTGCAACAACATATTACCATACCCGCTGCTGAGGGCGCTCTCAACGAT
GACGTTACATGCAGCCGCTGCATGTCTAACTATCTCGGGTTGGGAAAAGG
GTATTGTCCACACCCGGGTAGCCACCTTTTGTTTTGGAGATTTTCGGCCG
GGCGGGGGGTATCGACTTTAGTTTCCCTATGTAAAGTATAGGCGCACTCG
GAGGGAGCCAGAGTTGCCTGGGGATACCTCTATCTGCGAGCTGTTGACAA
ACCTTTTCCTGCGATTTGCGATCCGCCAAGACATGATCACCCGAATGAGG
ATACGCAGAACGTGCAGCCACACCGCATATAGCACACGTGAATCGTCATC
ACTAGCAGCGCACGAGTTGCTCCCGATGTGCGGCTTGCTCACCGCGGGTT
ATTGTCCCGAAGAAGGTAGAGTTTATCGTTTCGGTCCCCTGGGGGTGCCT
AGGGGGGGTAGCTTGGTGAGAATCTTCGTTGGTACACCCTTGCGATTGAC
TGTGTTGAGTTTGCATGGTGTTCGTCCTTTTTTTGCATGCTTACCTAGAG
TCCAAACACTCGGTAGGCGTTCCCGCCAGTTGGACCAGTACGAAATTTTG
AACGTTCACACTAGTCGGACAACGGCCCGGTTTCCAATGTAAAGAAAATG
GCATGGGCCGAGTCTTGTGGGGCGGCATCGACGCTAGTCCGTCTGGATTC
TTCTCGAAAGGGGAGACTTCAAAAAAAAATTCTTGCCGTGAAAACAATCA
ACACGTTACCGCCTCGAGTCTTCTCGCATGTCAACTCCAGAGGGCACACG
GAGCGCAATTCCTGGTATCCTGCCCGAAGGGGGGCGGGAGCCGATACCTA
GTGGATGGGCATAGCGCTGTTGAACATCCAAAGTTGACTATCCTCTGTGA
GCTTGGTCGACTTCGGGTTCCTAATGCTGTAGAGAATCAATGTCGGGACT
ATTGAAAGGTAGTTGTTGTTTCTCCGTTGATATGGTGGAATCTTCGTCGT
GCCAAATTACGGTTTTATCATGATACCAATCTGCTCAATGGATGGTGCGA
CATCACCTGGGTTTCTCGAGTAGCTGGAAGTGCCTCAGGGCTGCTCCGCT
GCTGCAAGTTGTCCTGAGGGATTATCAACGAAGTACTGAACAACCTTCCA
ATATGTGTCTTATCTACAAATGACATTTCGGCGACACATACGTGTTTAGG
AGACCCCGGTCTGCGCATGTCACTGTGCTGGCAACTGTTTGCCTCTCACC
AACAGCTCGATGCCTTCAGACAACACGCTGCTTCGAGAGTTGTTGGTGGT
TTTACCACAAGTTTTGGGCCTCCCTCCTGCAGATGGCTAAGCGCGTTCGC
TTTGCGACGCTGGTCAAAGAAATTGAAAATTCGGCTTCGCCGAGGTTCGT
GGTGAAATCTAGGGTGGGCAGTTTCATATCTCGACCGCTTGCCCCCTTGC
CTAGCCTGCCGATTACACAAACCTATAATGTTGTTAATTGTTCTCGATTG
AAAGCGTAGGTTTGGTTATCCGGCTCCTGATCGCCATCGACGTGAATTAT
AAGATCGGAACAAGTACCCGTTATCCGTTTCACCGAGTAAGGGTCAGAAA
TCCGCTCCTCCTGGTCTCGGGAGCTTTGCTCAAGCTGCATTATGGGACAT
CGTTGGCAATTGAACCTGGGTTGCTGCTCCGTATCCTCCATTTACCTGGT
GTTCGAATAGGTACTGACAACGAGTTTCTCAACGCAAAAAGTTGGATTTT
CTCTTGGACGGGTCCGTTTCATGAAGTTACCGGGTAGAGCAGTACTGTTG
AATTGTTTTGTGTTGAAGGAACTTCCTGAAACGCTTTGACTGTTGACCCC
TGCTAAAAATCCCGTGCGATGGCAGCCTCCTGGCAGCAATGAATCAAAAT
CGATCATTTGAGCCGCGGAGCGAGAGAAACGAGCAACATTTTTTCCCTTC
GTCCCCAGGATAAAAAGGGCTCTATATATCGGCCAAGGTTGCGCCGTGCG
ATACAGGGGCCCCAACACTTGGTTTCCGGGAAGCCTATTTAGCACACCTT
TGGGACCAGAACGAGATCTATAGGGCACCGATTGACGATCTGCTCGCTTC
TGAGGAAGAAGAAAAATAGCGCGCTCTTCTCCACAATGTTTTCGTCCTGC
TCCGAGAACAGATGGCCGTGCTTCACCGGCACATCTAGCCTATATTCGTA
GGAGATTTTGCTCCCCAACCCCGGGGTTTCTACACGAAAAGGGGTGCACA
AACGCGGAGATCGCGCGCGCGCGCGATTCAGACCGGGACAAGAAACACCG
ACAGAGACGCAAGAACACCACCAACAAACGCTATGAAAACCAGGAGTTGC
CGGGCCTATACGACCTGTGCACCGTGGGAATACTGTAGGCACACGCCATG
TGTAACCTGGCGGGTATTTATTGATGTTGAGTGGGTCCAACCAACTGCTT
CAAAAAGAGCAGACCGATTCTCACACAAATAACACACCTTCCCAAGTCCA
GATCACACCCAGCACCATCGACAGAATCCGTCGAGGGCGTGAGGGTGTAC
TACTGCTGCTGCTGTGCGTTATCAGGATGGTTCCCCACGGGATCGGTTGA
GATTGTGTACTTACGCCGCGCTACTGACTTTCTTAAAGAAAGCCGTGCCC
CGCATGCTGTTGTTTCTGCTGCAGGGCTGCAACAGGGCCTCTCGGCCTCT
CTCGCATCAAAGCCATTACGTCATCACATGACCATCAACGGCTCTTGTTG
TTTGTAGTCCACGCTGGACTGCTTGCTTTCACTCCTGGACGGGGCTCTCG
GAAGGCTTGAGACGAATGTGGCTGGCAAGTTGTGAGCCTGACGCAATATT
GGCCACCTGTCGTGTCGCAATCCTACATCTACGCTGCTGGTCGTGCTCCT
CGACGGTGTGATGTGTGATCCGCTCGCCGCCAGGGGGATGCCGCATGTAT
GTGTGTGCTTCTTCCAGATGCCCAGATGTGCGTGTTGGCGTCCGCGCAGC
GGGAAGACTTCACATTTTGTCTCTTCGTGCATGTACGTGCATCAAAATGG
AAAGAAACAACCAACGCGCATCATGTACTTGTAAAGTGCAACATTTTGAA
CGGTGGTCGCTCCCGTCGCACATTTGCTGTCCCTCTGTGGTGCACGCGTA
GCTGCACCACAAACGATTGACGCTGGTGTGTGTCGGGATTCGTGCACCGT
CAGCATCGCAGATAAGACTACTGCAAGGTACTGAGTCGCACCACGCGGCT
CATTACCCCCCGATACCTACTGCTGTAGAATATGGGCTTGGTCGGACTTT
CCGAGTGATGCTCGCAACACACTGTTTGTTTGCGCGCTGCAAACCTTGCG
AGAAACCCCACGCTCTCTGCCGGCGTCACACAACAGCATAGTCTACCTGA
TACGGTTTGAAACAAGACAAATATCAAATCCCCTCCTTAAGGGGTAACGA
CAGACGACATATCGATCCCCCGCTCCCACCCGACGTGGACCTGTTCGCGG
TCGCGGTGGCGTCTTTCCTGTTCTTGCATCAAGCTCAGCATTGGTCCCAT
TGGAAAGAAAGCTCTTCTTGACGCTCTTGGCAGCGTAACGTGTAACCTAG
TTTTATTGTGTTTTCGGGCATTGATTGGGTTCGCCCGATCAAAATCTGAC
TCATCAGCGTTTTCGTAGGACCGTCGCTTCATGGGCACTTGTTTTCTGTG
GGCGCATTGAGCGCGTTCTGTTGGCGCGATGAACTCTGGCGGCTGTCCAG
ATGTAAGAACCAACGACTCTTCATGCCGACCTCTGCATACGATGTCCGCT
TCCTCGAAGACCACGGGCCAATCGAGATCTCCCTCTCCGGCGTATTTGTT
CCAGATCCGCGAGCGGCCGAACGGGTCCAGAAACAGCGGCACAGGGGCAC
AGATCCACAAGCAAGCGGCTAATGTGAAACGTCAGCAGTGCGTCCGCACG
GAACCTGCCACGTTCCGGACCAATTCTAATAAGGGATATATCCAGTTTGC
TGGGCCCCCTCCTCGCCCGCCCAAGCCCACCGTTGCCACCAACCATCAAG
CACTGCTACGGCAGCCACTTTCGTTGAAGACGTAGGGAGCGGGCAAGGGA
GAGGAGAGAAAACACGGAGAGAGGCAGCGGGGGAATCG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1244:3846..16783-

>mRNA_E-siliculosus-1a_F_contig1244.1522.1 ID=mRNA_E-siliculosus-1a_F_contig1244.1522.1|Name=mRNA_E-siliculosus-1a_F_contig1244.1522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2508bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1244:3846..16783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGAGGGAGACGCCGGTTCGGGGTCCGCAAGGCCTGATGGAGGGAGACG
CCGGTTCGGGGTCCGCAAGGCCTGGACCCGATCAGAACTCGTGCTTAAAG
GTCCTCATCATTGCTTTCAACGAGATGTGGGGCGAGACGTGGGTTGCGAA
GGGTTGGTACACGTCGACCAAGGAGCTGCAGCTGGCGTCATTGGAGTTCT
GTAAGGTGTGCAGAACTTATCAGACCTTGCACTTGAATGTCGAGGCAAGA
ACGCCACGCAGGCTGCTGGCCGCCACCGACACCCCCCCCCTGCACCCGAA
GCGGCCATGTGGCACACGCTTGCCGCTTCTACGAGCACGAAGCGTGACGT
GGAACATGCGGACAGCTAGAGAATTGAGGAACCCCATCTTTGCAATGACG
GACTCGGACCGCCTGGTGTTTGGCCGTGGGTTTAAAGGCAACCTGGAAGC
TGTGGCATGGCCGCGACGGCTGAAAACGATCGACATGCGCGACTCCAATT
TCAACAAGCCTCTCGAACGGATGAGATTTCCGGCGTCGCTGGAGACGATC
GTCCTCTCGGAAGGGTTCAACCAACCGATCGACCGTGTCGAGTTTCCGGC
ATCGCTACGGCAGCTAATATTCTGCGTTGGTTCAACTTTCAACCAACCGA
TTACCGGAGGTTTTCTGCCTTCTTCGCTGCAGGAGATTGACTTGGGCGAA
CAGTTCAACCAACCTATTGAAGATGTGGTTTGGCCGCCGTCCCTCCTGAA
GCTCCATTTGGGCTACGAATTCGACCAGCCGATCCAACGGGTTGTTTTTC
CGCCATCGCTGCAAGAGCTCACCGTCGAGGGGAGCTTTAACCAGCCCATT
GAGGGAGTTTCATGGCCAGATTCCCTTCAGAGGCTCGCTTTTGGATTTTG
TTTCAACCGGTCAATTGACAACGTGAGATGGCCGGCGTCATTGCAAGAGA
TTACGTTTGCATCTTGCGAAGACCACGTCGACAATACGGTAACTGTGTAT
GCGGACTTCAACCAGAGCATCTGCAGCAGTGTTTGGCCTGCATCGCTCCG
GCGACTCACACTAGGCGAACATTTCAGGCAGTCACTGCAAGGACTGGGAA
CTTGGATCCCCAACCTTGAGGGGCTTCGTCTTCTTGACCATAAGGATGGT
TGCGGTACCAAAGAAAGCCTTCTCCGCGGAATCGAATGGCCTACGGCCCT
TCGTCACCTGACTGTGATTAAAGGATCGAATTTAGATGGGGTCACAATTC
CTTCAGTTGTACAGGTCGATTTCCTGGAGCAGGTGCTTTGAGACCCGATC
AGAACTCGTGCTTAAAGGTCCTCATCATTGCTTTCAACGAGATGTGGGGC
GAGACGTGGGTTGCGAAGGGTTGGTACACGTCGACCAAGGAGCTGCAGCT
GGCGTCATTGGAGTTCTGTAAGGTGTGCAGAACTTATCAGACCTTGCACT
TGAATGTCGAGGCAAGAACGCCACGCAGGCTGCTGGCCGCCACCGACACC
CCCCCCCTGCACCCGAAGCGGCCATGTGGCACACGCTTGCCGCTTCTACG
AGCACGAAGCGTGACGTGGAACATGCGGACAGCTAGAGAATTGAGGAACC
CCATCTTTGCAATGACGGACTCGGACCGCCTGGTGTTTGGCCGTGGGTTT
AAAGGCAACCTGGAAGCTGTGGCATGGCCGCGACGGCTGAAAACGATCGA
CATGCGCGACTCCAATTTCAACAAGCCTCTCGAACGGATGAGATTTCCGG
CGTCGCTGGAGACGATCGTCCTCTCGGAAGGGTTCAACCAACCGATCGAC
CGTGTCGAGTTTCCGGCATCGCTACGGCAGCTAATATTCTGCGTTGGTTC
AACTTTCAACCAACCGATTACCGGAGGTTTTCTGCCTTCTTCGCTGCAGG
AGATTGACTTGGGCGAACAGTTCAACCAACCTATTGAAGATGTGGTTTGG
CCGCCGTCCCTCCTGAAGCTCCATTTGGGCTACGAATTCGACCAGCCGAT
CCAACGGGTTGTTTTTCCGCCATCGCTGCAAGAGCTCACCGTCGAGGGGA
GCTTTAACCAGCCCATTGAGGGAGTTTCATGGCCAGATTCCCTTCAGAGG
CTCGCTTTTGGATTTTGTTTCAACCGGTCAATTGACAACGTGAGATGGCC
GGCGTCATTGCAAGAGATTACGTTTGCATCTTGCGAAGACCACGTCGACA
ATACGGTAACTGTGTATGCGGACTTCAACCAGAGCATCTGCAGCAGTGTT
TGGCCTGCATCGCTCCGGCGACTCACACTAGGCGAACATTTCAGGCAGTC
ACTGCAAGGACTGGGAACTTGGATCCCCAACCTTGAGGGGCTTCGTCTTC
TTGACCATAAGGATGGTTGCGGTACCAAAGAAAGCCTTCTCCGCGGAATC
GAATGGCCTACGGCCCTTCGTCACCTGACTGTGATTAAAGGATCGAATTT
AGATGGGGTCACAATTCCTTCAGTTGTACAGGTCGATTTCCTGGAGCAGG
TGCTTTGA
back to top