mRNA_E-siliculosus-1a_F_contig1237.1479.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE) HSP 1 Score: 611 bits (1575), Expect = 6.680e-209 Identity = 371/429 (86.48%), Postives = 378/429 (88.11%), Query Frame = 1
Query: 1 MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTS---------TPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDSGAGVVGGGGDGLGPDRVC 1260
M EVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRG +TAKE AATKIGPAGGSTSRKNDT GVDTA G GGPAXXXXXXXXXXXXX TPGEGSVAPSSXXXXXXXX G ISVRYT+DGKQ+PIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDV+C+IQPRWLKL+VRGAG AXXXXXXXXXXXXXXXXXX GAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKS+VEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGD GAGVVGGGGDGLGPD VC
Sbjct: 1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGPSTAKETAATKIGPAGGSTSRKNDT----------GVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKPAAA---GCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXX--GAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAGVVGGGGDGLGPDGVC 414
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA) HSP 1 Score: 265 bits (677), Expect = 6.970e-77 Identity = 168/398 (42.21%), Postives = 218/398 (54.77%), Query Frame = 1
Query: 1 MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGK-----TVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLP 1179
MT + D++L +LA + G +E LLG FFSFLHR TDFYV +DP +A MGFPAG +EK+LLR FRSFP K Y + +L A G R A K+ P+ S +R+ + ++ V XXXXXX + S + P G+ AP V+YT GKQ+PIGNGGVT RY WTQT+ E TVY+ VP GTR+ D+ C I P+ L+L+++ + + DG++P V ++SMW + D TVVI+ +K K+WW +V GDP ID + VDST KI EYD ETQGAIRKIMFDQ+QKSLGLPTSDEL +A+LE+AK +PGSPFLP
Sbjct: 6 MTSFQDQSDELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDYAAEVARLEEAQGLRR-------PAGPKLRPS--SEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPDASSSQAGPAAGTPAPKMPFP----------------------EVKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLKKE-------------------------PEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK) HSP 1 Score: 249 bits (636), Expect = 5.540e-71 Identity = 155/411 (37.71%), Postives = 205/411 (49.88%), Query Frame = 1
Query: 22 FDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSY-----------------GVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPS-LPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEG 1200
+D+VL LAGQ G ++ LL AFFSFLHR TDFYV +A MGF AG AEK+LL++FR FPYK A K P +D S K G A A P+ +P++S PG + VRYT +G Q+PIGNGG+T+ YYWTQT+ E T+YVD+P GTR+KD+ I P +K++++ A + +GE P + +SMW+L D +T+VI+ EK T++WW+S+++GDPEID KVDSTTK+ +YD ETQ IRKIMFDQ+QK+LGLPTS+EL +LE+AK GSPFLPGG +EG
Sbjct: 9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDN-QAKMGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADKAAPV---QHEPDDINDSQEQKKPDGPSAAA-----AHENAGDQLQRGTAPAPVPASSGPG--------------------------------LEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKAESEA-------------------------IIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGA-YEG 352
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.700e-59 Identity = 164/398 (41.21%), Postives = 204/398 (51.26%), Query Frame = 1
Query: 22 FDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAG--MGFPAGKAEKLLLRAFRSFPYKSY----GVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTS---TPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDG-----KTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
FDD+L ++A +AG ++ LL FFSFL R TDFYV FD +A MGFP G AEK++L+AFR + + Y G Q EQ PA T SP T PS P+ S TP S P XXXXXXXXXXXXXXXXXX YT DGKQ PIGNGG+ + YYWTQT+ + TVY+D G R KDV C I+ + LK+ +RG +VV DG L V ++SMW+++ + +VI+ EKT +WWK ++ G EIDT+KVDST I EYD TQ AIRKIMFDQ+QK LG PTS+E DALL +A ++PGSP
Sbjct: 19 FDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYETVMGNQKEQ-PA-------------------------------TLPSPPQT----------------------------PSKPTASEHLTPAAPSTPPKMSSGSXXXXXXXXXXXXXXXXXX------YTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG---------------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.900e-58 Identity = 137/393 (34.86%), Postives = 195/393 (49.62%), Query Frame = 1
Query: 19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFE 1197
+FDDV +LA Q+ +E +L F FLHR TDFYV + + A MGF G+AE++LLR F+SF +K +Q + + + E A +K + +SP++ A T LP P E P S++ +DGKQ+P+ NGG TD+Y W+QT+ EAT++V +P G R++D+ I P L + + +DV+ G+ P + ++S+W++++G + IS +K ++WW S + GD EIDT++VDS TKI +YD ETQG IRKIMFDQ+QK+LGLPTSDEL L ERAK PGSPFLPGG E
Sbjct: 6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAA-QQKTVRKKKNKIAKRSSEAAKSKA---------PSPVAASPQEAAASHTATV-------------------EDELPG---PTEHQSVPKMDGAAGALEERESKDPATKPEEVRP-SLKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKKAD-------------------------DDVILAGQWPRRIQGDESVWTVDNG-ILTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFAE 338
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN) HSP 1 Score: 183 bits (464), Expect = 7.610e-48 Identity = 90/195 (46.15%), Postives = 122/195 (62.56%), Query Frame = 1
Query: 589 VRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
V+ T GKQ+PIGNGG+TD+Y WTQT+ + TV V VP GT +K + C I+P+ L++ VR + V+ DGE P + ++S+WSL +G T+ +S EK ++WW S++ GD EIDTS+VDST I EYD TQGAIRK MFDQ+Q+ LGLPTS+EL LL +A++ P SP
Sbjct: 133 VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSST-----------------HSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.030e-46 Identity = 96/203 (47.29%), Postives = 127/203 (62.56%), Query Frame = 1
Query: 610 KQMPIGNGGVTDR--YYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLN-DGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDSG 1209
KQ P+GNGG Y WTQT+ E TVYVDVP GTR +D+ C I R L +++GAG ++++ F +A++ S+W+L+ D +V++ EK K+WW +EG PEIDTSKVDST K+ +YD +TQ AIRKIMFDQ+QK +GLPTSDEL A LLE+AK+ PGSPF+PGG L + G
Sbjct: 89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAGGQQ-------------------ASKEIPF-----TALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPLADAPGG 267
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT) HSP 1 Score: 179 bits (454), Expect = 6.020e-46 Identity = 131/389 (33.68%), Postives = 180/389 (46.27%), Query Frame = 1
Query: 19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKT----VVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
K+D+VL N+AGQ G ++ L FSFL+R TDF+ P MGF G AEK+LL AF + + + E + +T ++ + P + K + +SS + + DT + P + S P S AP++ SV + G +P NGG TDRY W QT+++ T+ V VP GTR+KD+ CVI L L++RG A D E+ V ++ W+L + V + EK + WWKS +EGD EIDT+KVDST + EYDGETQGAIRKIMFD+ QK GLPTSDE+ + LL +A GSPF
Sbjct: 6 KYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAEKARQEL--------QRDSTRRQSPGAAVKPVDSEGTPKKEQQSSSQKSDQSRPDTTQSK-------ESVVATAPVQPPETAASEPKAAS-APAA-------------------------SVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDAIIDKSYPC---------------DARNGKEIWEKVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPF 333
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A6S8EVI0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EVI0_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.100e-44 Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 1
Query: 592 RYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPS--AVSREDSMWSLNDGK-TVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFL 1176
RY KDGKQ+P GNGG + YYW Q++ E T+YV VPPGT SKD+ C I P +++ V+G + ++ +G P V+ + WS + + T+ IS +K ++WW S+V+G+PEIDT VDS K+ EYD ETQ IR+IMFDQ QK GLPTS E+ + +LE+AK + GSPFL
Sbjct: 71 RYNKDGKQVPEGNGGKGENYYWQQSLYEITIYVQVPPGTNSKDIVCEIDPGTIRVGVKG--------------------------KSLILEGNYPENYKVNTGECFWSFEEAENTITISLDKREQTWWPSVVQGEPEIDTQNVDSKRKVDEYDDETQATIRRIMFDQNQKRKGLPTSGEITTNGVLEKAKYIKGSPFL 242
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A485LKJ0_9STRA (Aste57867_22504 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKJ0_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.560e-44 Identity = 133/365 (36.44%), Postives = 178/365 (48.77%), Query Frame = 1
Query: 19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTS 1113
K+D V +A Q GS+ +L AFF FLHRNTDFYVT ++ + MGF G+A+ LL+R+F FP K ++ LP +SSPR V +AP PA XXXXXXXXXXX + +VAP T GKQ+P+GNGG T Y WTQ++ + TV++DVP GT+SKD++ + ++G G P + ED++WSL+ +T+V+S EKT +WWKS+VEGDPEIDTS+VDST +I EYD ETQGAIRKIM++QR ++ P S
Sbjct: 3 KYDAVFMGVAQQEGSITGVLNAFFDFLHRNTDFYVT---SENPQRKMGFAPGQAQALLVRSFNQFPMKPL---EDSLP---------------------------------KSSPR------VASAP----PAPAXXXXXXXXXXXXXXXKAVA--KKAVAPPVL----------------------------TAAGKQIPVGNGGSTPTYTWTQSLRDVTVHLDVPLGTKSKDIAVTFTHTTVSAGLKGQAPRLH--------------------------GTFPYKIKLEDTVWSLDSNQTLVLSMEKTVDTWWKSVVEGDPEIDTSQVDSTQRIDEYDPETQGAIRKIMYEQRTQNKESPPS 262 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1237.1479.1 >prot_E-siliculosus-1a_F_contig1237.1479.1 ID=prot_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=421bp MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARback to top mRNA from alignment at E-siliculosus-1a_F_contig1237:13159..16972- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1237.1479.1 ID=mRNA_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3814bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1237:13159..16972- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1237:13159..16972- >mRNA_E-siliculosus-1a_F_contig1237.1479.1 ID=mRNA_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2526bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1237:13159..16972- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |