mRNA_E-siliculosus-1a_F_contig1237.1479.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1237.1479.1
Unique NamemRNA_E-siliculosus-1a_F_contig1237.1479.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE)

HSP 1 Score: 611 bits (1575), Expect = 6.680e-209
Identity = 371/429 (86.48%), Postives = 378/429 (88.11%), Query Frame = 1
Query:    1 MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTS---------TPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDSGAGVVGGGGDGLGPDRVC 1260
            M EVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRG +TAKE AATKIGPAGGSTSRKNDT          GVDTA G GGPAXXXXXXXXXXXXX                TPGEGSVAPSSXXXXXXXX              G ISVRYT+DGKQ+PIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDV+C+IQPRWLKL+VRGAG AXXXXXXXXXXXXXXXXXX  GAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKS+VEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGD GAGVVGGGGDGLGPD VC
Sbjct:    1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGPSTAKETAATKIGPAGGSTSRKNDT----------GVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKPAAA---GCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXX--GAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAGVVGGGGDGLGPDGVC 414          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA)

HSP 1 Score: 265 bits (677), Expect = 6.970e-77
Identity = 168/398 (42.21%), Postives = 218/398 (54.77%), Query Frame = 1
Query:    1 MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGK-----TVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLP 1179
            MT    + D++L +LA + G +E LLG FFSFLHR TDFYV +DP    +A MGFPAG +EK+LLR FRSFP K Y  +  +L  A G  R        A  K+ P+  S +R+   +     ++   V          XXXXXX        +  S + P  G+ AP                            V+YT  GKQ+PIGNGGVT RY WTQT+ E TVY+ VP GTR+ D+ C I P+ L+L+++                            + + DG++P  V  ++SMW + D       TVVI+ +K  K+WW  +V GDP ID + VDST KI EYD ETQGAIRKIMFDQ+QKSLGLPTSDEL  +A+LE+AK +PGSPFLP
Sbjct:    6 MTSFQDQSDELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDYAAEVARLEEAQGLRR-------PAGPKLRPS--SEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPDASSSQAGPAAGTPAPKMPFP----------------------EVKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLKKE-------------------------PEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK)

HSP 1 Score: 249 bits (636), Expect = 5.540e-71
Identity = 155/411 (37.71%), Postives = 205/411 (49.88%), Query Frame = 1
Query:   22 FDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSY-----------------GVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPS-LPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEG 1200
            +D+VL  LAGQ G ++ LL AFFSFLHR TDFYV        +A MGF AG AEK+LL++FR FPYK                                           A K  P        +D   S    K  G   A      A             P+ +P++S PG                                + VRYT +G Q+PIGNGG+T+ YYWTQT+ E T+YVD+P GTR+KD+   I P  +K++++    A                         + +GE P   +  +SMW+L D +T+VI+ EK T++WW+S+++GDPEID  KVDSTTK+ +YD ETQ  IRKIMFDQ+QK+LGLPTS+EL    +LE+AK   GSPFLPGG  +EG
Sbjct:    9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDN-QAKMGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADKAAPV---QHEPDDINDSQEQKKPDGPSAAA-----AHENAGDQLQRGTAPAPVPASSGPG--------------------------------LEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKAESEA-------------------------IIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGA-YEG 352          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.700e-59
Identity = 164/398 (41.21%), Postives = 204/398 (51.26%), Query Frame = 1
Query:   22 FDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAG--MGFPAGKAEKLLLRAFRSFPYKSY----GVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTS---TPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDG-----KTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
            FDD+L ++A +AG ++ LL  FFSFL R TDFYV FD     +A   MGFP G AEK++L+AFR +  + Y    G Q EQ PA                               T  SP  T                            PS P+ S   TP   S  P      XXXXXXXXXXXXXXXXXX      YT DGKQ PIGNGG+ + YYWTQT+ + TVY+D   G R KDV C I+ + LK+ +RG                           +VV DG L   V  ++SMW+++       + +VI+ EKT  +WWK ++ G  EIDT+KVDST  I EYD  TQ AIRKIMFDQ+QK LG PTS+E   DALL +A ++PGSP 
Sbjct:   19 FDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYETVMGNQKEQ-PA-------------------------------TLPSPPQT----------------------------PSKPTASEHLTPAAPSTPPKMSSGSXXXXXXXXXXXXXXXXXX------YTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG---------------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.900e-58
Identity = 137/393 (34.86%), Postives = 195/393 (49.62%), Query Frame = 1
Query:   19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFE 1197
            +FDDV  +LA Q+  +E +L   F FLHR TDFYV  +  +   A MGF  G+AE++LLR F+SF +K      +Q      + +    + E A +K           +   +SP++  A    T                       LP    P E    P                           S++  +DGKQ+P+ NGG TD+Y W+QT+ EAT++V +P G R++D+   I P  L +  +                           +DV+  G+ P  +  ++S+W++++G  + IS +K  ++WW S + GD EIDT++VDS TKI +YD ETQG IRKIMFDQ+QK+LGLPTSDEL    L ERAK  PGSPFLPGG   E
Sbjct:    6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAA-QQKTVRKKKNKIAKRSSEAAKSKA---------PSPVAASPQEAAASHTATV-------------------EDELPG---PTEHQSVPKMDGAAGALEERESKDPATKPEEVRP-SLKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKKAD-------------------------DDVILAGQWPRRIQGDESVWTVDNG-ILTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFAE 338          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN)

HSP 1 Score: 183 bits (464), Expect = 7.610e-48
Identity = 90/195 (46.15%), Postives = 122/195 (62.56%), Query Frame = 1
Query:  589 VRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
            V+ T  GKQ+PIGNGG+TD+Y WTQT+ + TV V VP GT +K + C I+P+ L++ VR +                           V+ DGE P  +  ++S+WSL +G T+ +S EK  ++WW S++ GD EIDTS+VDST  I EYD  TQGAIRK MFDQ+Q+ LGLPTS+EL    LL +A++ P SP 
Sbjct:  133 VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSST-----------------HSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.030e-46
Identity = 96/203 (47.29%), Postives = 127/203 (62.56%), Query Frame = 1
Query:  610 KQMPIGNGGVTDR--YYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLN-DGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDSG 1209
            KQ P+GNGG      Y WTQT+ E TVYVDVP GTR +D+ C I  R L  +++GAG                       ++++ F     +A++   S+W+L+ D   +V++ EK  K+WW   +EG PEIDTSKVDST K+ +YD +TQ AIRKIMFDQ+QK +GLPTSDEL A  LLE+AK+ PGSPF+PGG L +   G
Sbjct:   89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAGGQQ-------------------ASKEIPF-----TALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPLADAPGG 267          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT)

HSP 1 Score: 179 bits (454), Expect = 6.020e-46
Identity = 131/389 (33.68%), Postives = 180/389 (46.27%), Query Frame = 1
Query:   19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKT----VVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPF 1173
            K+D+VL N+AGQ G ++ L    FSFL+R TDF+    P       MGF  G AEK+LL AF  +   +   + E         +  +T ++     + P     + K + +SS + +     DT   +                 P   + S P   S AP++                         SV +   G  +P  NGG TDRY W QT+++ T+ V VP GTR+KD+ CVI    L L++RG   A                       D     E+   V  ++  W+L    +    V +  EK  + WWKS +EGD EIDT+KVDST  + EYDGETQGAIRKIMFD+ QK  GLPTSDE+  + LL +A    GSPF
Sbjct:    6 KYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAEKARQEL--------QRDSTRRQSPGAAVKPVDSEGTPKKEQQSSSQKSDQSRPDTTQSK-------ESVVATAPVQPPETAASEPKAAS-APAA-------------------------SVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDAIIDKSYPC---------------DARNGKEIWEKVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPF 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A6S8EVI0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EVI0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.100e-44
Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  592 RYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPS--AVSREDSMWSLNDGK-TVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFL 1176
            RY KDGKQ+P GNGG  + YYW Q++ E T+YV VPPGT SKD+ C I P  +++ V+G                          + ++ +G  P    V+  +  WS  + + T+ IS +K  ++WW S+V+G+PEIDT  VDS  K+ EYD ETQ  IR+IMFDQ QK  GLPTS E+  + +LE+AK + GSPFL
Sbjct:   71 RYNKDGKQVPEGNGGKGENYYWQQSLYEITIYVQVPPGTNSKDIVCEIDPGTIRVGVKG--------------------------KSLILEGNYPENYKVNTGECFWSFEEAENTITISLDKREQTWWPSVVQGEPEIDTQNVDSKRKVDEYDDETQATIRRIMFDQNQKRKGLPTSGEITTNGVLEKAKYIKGSPFL 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Match: A0A485LKJ0_9STRA (Aste57867_22504 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKJ0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.560e-44
Identity = 133/365 (36.44%), Postives = 178/365 (48.77%), Query Frame = 1
Query:   19 KFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVAATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAXXXXXXXXXXXXXPSLPSTSTPGEGSVAPSSXXXXXXXXXXXXXXXXXXXXXXGGISVRYTKDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWLKLEVRGAGAAXXXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTS 1113
            K+D V   +A Q GS+  +L AFF FLHRNTDFYVT   ++  +  MGF  G+A+ LL+R+F  FP K     ++ LP                                 +SSPR      V +AP    PA  XXXXXXXXXXX          + +VAP                               T  GKQ+P+GNGG T  Y WTQ++ + TV++DVP GT+SKD++       +   ++G                                G  P  +  ED++WSL+  +T+V+S EKT  +WWKS+VEGDPEIDTS+VDST +I EYD ETQGAIRKIM++QR ++   P S
Sbjct:    3 KYDAVFMGVAQQEGSITGVLNAFFDFLHRNTDFYVT---SENPQRKMGFAPGQAQALLVRSFNQFPMKPL---EDSLP---------------------------------KSSPR------VASAP----PAPAXXXXXXXXXXXXXXXKAVA--KKAVAPPVL----------------------------TAAGKQIPVGNGGSTPTYTWTQSLRDVTVHLDVPLGTKSKDIAVTFTHTTVSAGLKGQAPRLH--------------------------GTFPYKIKLEDTVWSLDSNQTLVLSMEKTVDTWWKSVVEGDPEIDTSQVDSTQRIDEYDPETQGAIRKIMYEQRTQNKESPPS 262          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ97_9PHAE6.680e-20986.48CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2SV46_9STRA6.970e-7742.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XL32_HETAK5.540e-7137.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3H6E3_9STRA2.700e-5941.21Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9U371_9STRA7.900e-5834.86Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A2D4C6K1_PYTIN7.610e-4846.15CS domain-containing protein n=2 Tax=Pythium insid... [more]
A0A835Z5P8_9STRA1.030e-4647.29Nuclear migration protein nudC-like protein n=1 Ta... [more]
A0A7S4FC07_CHRCT6.020e-4633.68Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6S8EVI0_9STRA1.100e-4443.43Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A485LKJ0_9STRA1.560e-4436.44Aste57867_22504 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1237contigE-siliculosus-1a_F_contig1237:13159..16972 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1263
Model size2921
Exons2
Ec32 orthologEc-26_003380.1
Ec32 ortholog descriptionHSP20-like chaperone
Hectar predicted targeting categoryother localisation
BRITEko00000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG2265@1,KOG2265@2759
EggNOG free text desc.unfolded protein binding
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005868,GO:0005875,GO:0006457,GO:0006810,GO:0006996,GO:0007097,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0060271,GO:0070727,GO:0070925,GO:0071539,GO:0071840,GO:0072698,GO:0120031,GO:0120036,GO:1902494,GO:1905508,GO:1905793
KEGG TC1.A.1.4
KEGG koko:K21867
Preferred nameNUDCD3
Seed eggNOG ortholog2880.D8LL35
Seed ortholog evalue1.3e-187
Seed ortholog score662.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1237.1479.1prot_E-siliculosus-1a_F_contig1237.1479.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1237 14817..16972 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927757.0278986-UTR-E-siliculosus-1a_F_contig1237:13158..148161622927757.0278986-UTR-E-siliculosus-1a_F_contig1237:13158..14816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1237 13159..14816 -
1696318668.2580066-UTR-E-siliculosus-1a_F_contig1237:13158..148161696318668.2580066-UTR-E-siliculosus-1a_F_contig1237:13158..14816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1237 13159..14816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927757.0416062-CDS-E-siliculosus-1a_F_contig1237:14816..150711622927757.0416062-CDS-E-siliculosus-1a_F_contig1237:14816..15071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1237 14817..15071 -
1696318668.2699356-CDS-E-siliculosus-1a_F_contig1237:14816..150711696318668.2699356-CDS-E-siliculosus-1a_F_contig1237:14816..15071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1237 14817..15071 -
1622927757.0518012-CDS-E-siliculosus-1a_F_contig1237:15964..169721622927757.0518012-CDS-E-siliculosus-1a_F_contig1237:15964..16972Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1237 15965..16972 -
1696318668.2793708-CDS-E-siliculosus-1a_F_contig1237:15964..169721696318668.2793708-CDS-E-siliculosus-1a_F_contig1237:15964..16972Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1237 15965..16972 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1237.1479.1

>prot_E-siliculosus-1a_F_contig1237.1479.1 ID=prot_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=421bp
MTEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTAR
AGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGRTTAKEVA
ATKIGPAGGSTSRKNDTRSSPRDTKAGGVDTAPGRGGPAPAPKASAAAAA
AAPSLPSTSTPGEGSVAPSSTTTPPTEPPTTANDKPAAAAAAGGISVRYT
KDGKQMPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVSCVIQPRWL
KLEVRGAGAAGGAGAAAAAAAAAAAGGAAAGAEDVVFDGELPSAVSREDS
MWSLNDGKTVVISFEKTTKSWWKSIVEGDPEIDTSKVDSTTKISEYDGET
QGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEG
DSGAGVVGGGGDGLGPDRVC*
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mRNA from alignment at E-siliculosus-1a_F_contig1237:13159..16972-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1237.1479.1 ID=mRNA_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3814bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1237:13159..16972- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACGGAAGTCGGCCGGAAATTCGACGACGTTCTCCGGAACCTGGCGGG CCAGGCAGGGTCCCTCGAGGCCTTGCTAGGGGCGTTCTTTTCCTTCCTCC ACAGGAACACCGACTTCTATGTCACCTTCGATCCCACCAAGACCGCCAGG GCGGGCATGGGCTTCCCGGCTGGAAAGGCGGAAAAGCTCCTCCTCCGCGC GTTCCGATCCTTCCCGTACAAGTCGTACGGAGTCCAGGACGAGCAACTGC CGGCGGCAGCAGGGAGAGGGCGAGGACGAACAACGGCGAAGGAAGTTGCT GCGACAAAAATTGGACCTGCCGGGGGCTCAACCTCGCGGAAGAACGATAC CCGATCTTCTCCTCGGGATACAAAGGCCGGCGGCGTCGACACCGCCCCTG GGCGTGGCGGTCCTGCCCCGGCACCAAAAGCTTCAGCAGCAGCAGCAGCA GCTGCACCATCATTACCATCGACGTCAACTCCCGGCGAAGGCTCCGTCGC CCCTTCCTCCACGACAACCCCGCCTACTGAACCACCAACCACCGCCAACG ACAAACCGGCGGCGGCGGCGGCGGCGGGAGGCATAAGCGTGCGCTACACG AAGGACGGAAAGCAGATGCCTATCGGCAACGGCGGCGTGACCGACAGGTA CTACTGGACGCAAACAGTAAACGAAGCCACGGTGTACGTCGACGTGCCCC CCGGCACTCGCTCCAAGGACGTGTCTTGCGTCATTCAGCCTAGATGGCTG AAGCTAGAGGTAAGAGGTGCAGGCGCGGCGGGAGGGGCGGGGGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCGGGAGGAGCAGCAGCGGGGGCTGAGG ACGTGGTTTTCGACGGGGAGCTACCGAGCGCGGTGTCGCGGGAGGACAGC ATGTGGAGCCTGAACGACGGCAAGACGGTAGTGATATCGTTCGAGAAGAC GACCAAGTCGTGGTGGAAGAGCATCGTCGAGGGTGACCCGGAGATAGACA CCTCCAAGGTGGGATTCAGTGATAACGACGGCGACGATCGGCTTTCTCCA GACTCTTACTGGACGTGCAGCTTGCTTTGTCGCTGTGGCCAATCTCACTA CAAGCACTGCCATACATACCGTAGGTTGCGTAACGTACCACACCCACTGG ACCGATTTAAGAGCTTGATTACAGTACTCCACGACGAAGGGGATGCCACG GTCAAATAACGCATTATTTTCGGAAAGATTAGATTAGACGAGACGGTTCC AACCCCGCCGTTTCAGCACAGTCAGGCTTTTTGCTGCAGAGAGATGGAGC TTCGAAAGAGGGTCCAGGAGGTGCGGTATCTCGTGCACCAACGGTGCACC ATTGTTGTTGAATTTTTGTTTCTTCTTGCCTTCGTGACTTCCGCTTTGTA TTTGAGTGCCAAGTGCCAAGACTTTTGCGTGATAGTGGTGGCGGTACCCC CTGGCTTTGGAGCGAGGCAGGCGGGCCGACGACAGAAACGAAGCACAATT TCTAGCTGTTTCTCCTTCAGGCCGCAGCGGTATAGCAATGGTTGGAGCTA CGGCAAGTCACGGAACGACAACGTGAAGACCGGCAGCCCTTTCGCGACTG TGTCCAAGCTCAATCAAGAACAACACGATTTTTTGTCTTTGAGTCAAATC CGGAACTCGCTGTGTGCTGTTTGTTGTGGATAGACACGGAAACGCGGAGA TCGGACTGACCTGCTCCGTTTTTCACGATTCAGTACCTTCTTGTCAGTAC AGCAACAGTGAAGAACGTTGAAGTTGGTTGCCGTTCCGCGATCCACACTC GCCATTCGGTGTCCACTCCATATCCGAATGTAGACATTTATATGTGTACC ATAGATCAATCCTTGTACATCCATATTTATTTCTTGTTTGTTGTGGTTCA GGTCGACTCAACCACCAAGATCAGCGAGTACGACGGGGAGACTCAGGGCG CGATCCGCAAGATCATGTTCGACCAGCGTCAGAAGTCGCTCGGCCTTCCA ACGAGCGACGAGCTCAACGCCGACGCTCTGCTTGAGAGGGCCAAGGTCTT GCCGGGCAGCCCGTTCCTTCCGGGCGGCGTGCTCTTCGAGGGAGACAGCG GTGCCGGCGTTGTTGGTGGTGGCGGTGATGGCCTTGGACCCGATCGTGTG TGTTGACAGAGGTCCACCTGGCCCCGTCAAGCAGAGCTCGCTTGATCTAG GCCGTCGAATCCTCGCGCTTGTGAGTCGTTCTCCTGCTGCTACAGTAGTA GGAGCGGCGGCGGCACTAGCTCAACAGCCGGCGACAATATATGGCGTTGA TGCTGGTTTTAGGCCCGATTAATAGTTGAACGCAAGACACCAGTACGGCG GCCGTGGAGGATGGCCCCTTCTTTGTTGGGGGAATGGTTTATTTGCTTCC ACGACGGCACCACGTGCGTGCAGGCACAAGTGTTTCAGGTGTCGGCGTGT GGATTTTTGTGCTTTATGGTGTTGCAGCCTGCAATGTATCGACGTCTCGA CGGCGGCACGCGTCTCATTGTTCATGCGAGGAAGATATGCTGAATTTTTC CCTCTTTGTATGCACACGCGTATGTTGCACATGTGCTGTGGTTCTTCACT GCGAACGGGTCTGTGGGAACTCACAAACCAACAGCAAAGCAGTAGTTTCT TCGTCGTTCTTGCACAGCTGTTTCGCGCCGGCCTCGGGAGAGGGAGTGCA CCAAGATGACAGTTTTGACTTTCCACCGGTAGTAATTGCGATGCTGTGCA TGTACAGTACGTACGCGCCAACTGGACTGGGATTCCCTGCGCCGACTACG GCTCCGCACTCCATTGCGTGTTTTCCGAGACGTCTAACATCCAACGCGCA CAACGGGATGTAATTCACAACCCCAGGCGTTCGCAACAGCTACAAGTGGT GGACGCAGTATGTGTTGTGCTTGAACCGCCACCAACGGGGAAAAACATTG TCCAGTCGAAATATTTAGGGTCATGGCTGTTTTCGCTTTTTTTAGGGTCA GAACAGAACAACCCCAGAGGGGACTTCTGAACGAGCGTCGACGAAGAGAT GTTGAGGCCGATGTGATTCTGTGATGGCGCGTGCGAGCGGGTGTGCAGCA ACAGGTGGTTTTAGACGTACGCAAAATAAGAACTCGCCGGGTACCCGGCG ACGGTCCTCAACTACATGCCCCCGAAGTCCATCATCGAGCTGGCACAACG TATCAGGTCTTTCAAAACCATTGGGCACACAACACGGTTGAACTACACGA GAGAGTAGTTGTCAAAAAAAGAGTGGGGGGGTTGCCGGCACAGAGCCAGT TCCTGCCGGCAGTGAGGCAATCCCTTGCACATCACGCTCTCTCTGTGCAC TGAAGTCTTCCACCGCTTGTTTCCTCTCTTTCGCTGTGTGATCGATAGCA AACACGCTTGCTCATTGCTGCCAAACACCACAGACTCAGCACGCTTGAGC ATTTTTTGGTTAATTTTTTTTTCAGATCCTGCTGCCGATGGGAAGACCAA GACCCATCCACGACACACCGCCGATATCCGCCGCCGCAAAAACAACAACA AGGACCGGTGTATCAACAACCACCGATCGCCTCGGTCGAGATGACACGCG CGTGCCATCCAAAGCAGACGGACGAACAGGGTCTCCCTCTCCCCTCCCCC AAACCCGGCATCCTTTCGTCAAAAACGTAAGAGTCCGCGGAGCTGCTGCG GTCTAAGCTTTAGCCCAAGAAGGTGGTGGGACGCGACGCCTTGAAGGTAG TCCTGAACTTCTTCTTCGGCGCGCGCGGGAGGCGGTGAGTGAGGGGGAAC TTGATGTTCGCGTT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1237:13159..16972-

>mRNA_E-siliculosus-1a_F_contig1237.1479.1 ID=mRNA_E-siliculosus-1a_F_contig1237.1479.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1479.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2526bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1237:13159..16972- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACGGAAGTCGGCCGGAAATTCGACGACGTTCTCCGGAACCTGGCGGG
CCAGGCAGGGTCCCTCGAGGCCTTGCTAGGGGCGTTCTTTTCCTTCCTCC
ACAGGAACACCGACTTCTATGTCACCTTCGATCCCACCAAGACCGCCAGG
GCGGGCATGGGCTTCCCGGCTGGAAAGGCGGAAAAGCTCCTCCTCCGCGC
GTTCCGATCCTTCCCGTACAAGTCGTACGGAGTCCAGGACGAGCAACTGC
CGGCGGCAGCAGGGAGAGGGCGAGGACGAACAACGGCGAAGGAAGTTGCT
GCGACAAAAATTGGACCTGCCGGGGGCTCAACCTCGCGGAAGAACGATAC
CCGATCTTCTCCTCGGGATACAAAGGCCGGCGGCGTCGACACCGCCCCTG
GGCGTGGCGGTCCTGCCCCGGCACCAAAAGCTTCAGCAGCAGCAGCAGCA
GCTGCACCATCATTACCATCGACGTCAACTCCCGGCGAAGGCTCCGTCGC
CCCTTCCTCCACGACAACCCCGCCTACTGAACCACCAACCACCGCCAACG
ACAAACCGGCGGCGGCGGCGGCGGCGGGAGGCATAAGCGTGCGCTACACG
AAGGACGGAAAGCAGATGCCTATCGGCAACGGCGGCGTGACCGACAGGTA
CTACTGGACGCAAACAGTAAACGAAGCCACGGTGTACGTCGACGTGCCCC
CCGGCACTCGCTCCAAGGACGTGTCTTGCGTCATTCAGCCTAGATGGCTG
AAGCTAGAGGTAAGAGGTGCAGGCGCGGCGGGAGGGGCGGGGGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCGGGAGGAGCAGCAGCGGGGGCTGAGG
ACGTGGTTTTCGACGGGGAGCTACCGAGCGCGGTGTCGCGGGAGGACAGC
ATGTGGAGCCTGAACGACGGCAAGACGGTAGTGATATCGTTCGAGAAGAC
GACCAAGTCGTGGTGGAAGAGCATCGTCGAGGGTGACCCGGAGATAGACA
CCTCCAAGATGACGGAAGTCGGCCGGAAATTCGACGACGTTCTCCGGAAC
CTGGCGGGCCAGGCAGGGTCCCTCGAGGCCTTGCTAGGGGCGTTCTTTTC
CTTCCTCCACAGGAACACCGACTTCTATGTCACCTTCGATCCCACCAAGA
CCGCCAGGGCGGGCATGGGCTTCCCGGCTGGAAAGGCGGAAAAGCTCCTC
CTCCGCGCGTTCCGATCCTTCCCGTACAAGTCGTACGGAGTCCAGGACGA
GCAACTGCCGGCGGCAGCAGGGAGAGGGCGAGGACGAACAACGGCGAAGG
AAGTTGCTGCGACAAAAATTGGACCTGCCGGGGGCTCAACCTCGCGGAAG
AACGATACCCGATCTTCTCCTCGGGATACAAAGGCCGGCGGCGTCGACAC
CGCCCCTGGGCGTGGCGGTCCTGCCCCGGCACCAAAAGCTTCAGCAGCAG
CAGCAGCAGCTGCACCATCATTACCATCGACGTCAACTCCCGGCGAAGGC
TCCGTCGCCCCTTCCTCCACGACAACCCCGCCTACTGAACCACCAACCAC
CGCCAACGACAAACCGGCGGCGGCGGCGGCGGCGGGAGGCATAAGCGTGC
GCTACACGAAGGACGGAAAGCAGATGCCTATCGGCAACGGCGGCGTGACC
GACAGGTACTACTGGACGCAAACAGTAAACGAAGCCACGGTGTACGTCGA
CGTGCCCCCCGGCACTCGCTCCAAGGACGTGTCTTGCGTCATTCAGCCTA
GATGGCTGAAGCTAGAGGTAAGAGGTGCAGGCGCGGCGGGAGGGGCGGGG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGGAGGAGCAGCAGCGGG
GGCTGAGGACGTGGTTTTCGACGGGGAGCTACCGAGCGCGGTGTCGCGGG
AGGACAGCATGTGGAGCCTGAACGACGGCAAGACGGTAGTGATATCGTTC
GAGAAGACGACCAAGTCGTGGTGGAAGAGCATCGTCGAGGGTGACCCGGA
GATAGACACCTCCAAGGTCGACTCAACCACCAAGATCAGCGAGTACGACG
GGGAGACTCAGGGCGCGATCCGCAAGATCATGTTCGACCAGCGTCAGAAG
TCGCTCGGCCTTCCAACGAGCGACGAGCTCAACGCCGACGCTCTGCTTGA
GAGGGCCAAGGTCTTGCCGGGCAGCCCGTTCCTTCCGGGCGGCGTGCTCT
TCGAGGGAGACAGCGGTGCCGGCGTTGTTGGTGGTGGCGGTGATGGCCTT
GGACCCGATCGTGTGTGTTGAGTCGACTCAACCACCAAGATCAGCGAGTA
CGACGGGGAGACTCAGGGCGCGATCCGCAAGATCATGTTCGACCAGCGTC
AGAAGTCGCTCGGCCTTCCAACGAGCGACGAGCTCAACGCCGACGCTCTG
CTTGAGAGGGCCAAGGTCTTGCCGGGCAGCCCGTTCCTTCCGGGCGGCGT
GCTCTTCGAGGGAGACAGCGGTGCCGGCGTTGTTGGTGGTGGCGGTGATG
GCCTTGGACCCGATCGTGTGTGTTGA
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