mRNA_E-siliculosus-1a_F_contig12346.1468.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: D7FVH2_ECTSI (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH2_ECTSI) HSP 1 Score: 182 bits (463), Expect = 1.160e-51 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
+VYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI
Sbjct: 1284 EVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 1370
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A6H5JBI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI4_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.580e-51 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
Query: 4 VYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
VYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI
Sbjct: 1290 VYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 1375
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A835Z597_9STRA (MyTH4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z597_9STRA) HSP 1 Score: 165 bits (417), Expect = 8.130e-48 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
+ YLQIMKQLT NPKP+S AKGWQVMCM C TFLPSM+FENYLLNF+LEKCQ +GAEACYA+YCLHTLEGMMSSRTNEGIVPTLEEI
Sbjct: 192 EAYLQIMKQLTENPKPESAAKGWQVMCMCCGTFLPSMEFENYLLNFVLEKCQADGAEACYARYCLHTLEGMMSSRTNEGIVPTLEEI 278
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A835YPP0_9STRA (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.120e-44 Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
+ YLQIMKQLT NPKP+S AKGWQV+CM C TFLPSMDFENYLLNF+L+K Q EGAEACYA+YCLHTLEGMMSSRTNEGIVPTLEEI
Sbjct: 1323 EAYLQIMKQLTDNPKPESAAKGWQVLCMCCGTFLPSMDFENYLLNFVLDKSQSEGAEACYARYCLHTLEGMMSSRTNEGIVPTLEEI 1409
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A7R9YD73_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD73_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.500e-28 Identity = 55/87 (63.22%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++Y Q+MKQL+SNPKP+S AKGWQ+MCM STF P++DFENYLLNFIL+K + GA YAKYCL LEGM++S + G VP++EEI
Sbjct: 780 EIYCQVMKQLSSNPKPESIAKGWQMMCMCVSTFPPTIDFENYLLNFILKKVESRGAVKNYAKYCLRALEGMLTSGAS-GFVPSVEEI 865
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A482S091_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S091_9ARCH) HSP 1 Score: 103 bits (258), Expect = 4.680e-24 Identity = 49/88 (55.68%), Postives = 67/88 (76.14%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQI-EGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++YLQI+KQL++NP+P+S AKGWQVMCM TF PS +FE++LL++I+EK GA YA+YCL TLE M++S G VP++EEI
Sbjct: 151 EIYLQIVKQLSNNPRPESVAKGWQVMCMCVGTFPPSFEFESFLLHYIIEKRDRGRGAVVDYARYCLRTLEAMLNSGDGTGFVPSVEEI 238
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A7S2FEI0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEI0_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.840e-23 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++Y+QIMKQLT NP DS AKGWQVMCM S F PS DFE+YLLNF+L + + +GA YA+YCL +LEG+++S +PT+EEI
Sbjct: 1417 EIYMQIMKQLTKNPTADSIAKGWQVMCMCVSCFPPSSDFEDYLLNFMLMQREKKGAVKNYARYCLRSLEGILTSG-GSNYIPTVEEI 1502
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A7S3HK87_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK87_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.570e-22 Identity = 47/88 (53.41%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQI-EGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++Y+ I+KQL++NP+P+S AKGWQVMCM TF PS +FEN+LL++I+EK GA YA+YCL TLE +++S G VP++EEI
Sbjct: 245 EIYMLIIKQLSNNPRPESVAKGWQVMCMCVGTFPPSPEFENFLLHYIIEKRDRGRGAVIDYARYCLRTLEAILNSGDGTGFVPSVEEI 332
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A2R5G113_9STRA (Myosin-6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G113_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.250e-19 Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++Y+Q+ K LT+NPKP+S + WQ+MCM TF PS DF+ +LLNF+LE + G Y++Y L L+GM+ R G VP ++EI
Sbjct: 1296 EIYIQLCKHLTNNPKPESVGRAWQLMCMAVGTFPPSDDFKMFLLNFLLEHVHVGGLVGSYSRYALRRLDGMLI-RGASGFVPNIDEI 1381
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Match: A0A8H8N7D2_9AGAM (Rho GTPase-activating-like protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8N7D2_9AGAM) HSP 1 Score: 79.0 bits (193), Expect = 3.200e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 1 QVYLQIMKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQ-IEGAEACYAKYCLHTLEGMMSSRTNEGIVPTLEEI 261
++Y Q++KQLT NP P+ST +GWQ++C+ TF PS +FE YL +F+L K + EG AKYCLH L +++ + G PT +EI
Sbjct: 598 EIYCQVVKQLTDNPNPESTFRGWQLLCVLLVTFPPSKNFEGYLRSFMLGKVKHTEGRVDVMAKYCLHRLP-VIAKKGPRGKPPTAQEI 684 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12346.1468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12346.1468.1 >prot_E-siliculosus-1a_F_contig12346.1468.1 ID=prot_E-siliculosus-1a_F_contig12346.1468.1|Name=mRNA_E-siliculosus-1a_F_contig12346.1468.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=81bp MKQLTSNPKPDSTAKGWQVMCMGCSTFLPSMDFENYLLNFILEKCQIEGAback to top mRNA from alignment at E-siliculosus-1a_F_contig12346:222..1122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12346.1468.1 ID=mRNA_E-siliculosus-1a_F_contig12346.1468.1|Name=mRNA_E-siliculosus-1a_F_contig12346.1468.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=901bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12346:222..1122- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12346:222..1122- >mRNA_E-siliculosus-1a_F_contig12346.1468.1 ID=mRNA_E-siliculosus-1a_F_contig12346.1468.1|Name=mRNA_E-siliculosus-1a_F_contig12346.1468.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=486bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12346:222..1122- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |