mRNA_E-siliculosus-1a_F_contig12342.1466.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A0F9VWG7_9ZZZZ (Aldedh domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9VWG7_9ZZZZ) HSP 1 Score: 318 bits (816), Expect = 8.400e-106 Identity = 148/164 (90.24%), Postives = 161/164 (98.17%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQRQ+AMLAEAADH CR+IDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIG+SD+Q+AI+Y+NARPHPLALYAFT+DK+LQQQLLHETHSGALVFNATLL+HAVPSLPFGGVGESGMGAYHGRHGFERFSH+RGVF+Q KRNLSH+LYPPYRRWLMKLLG G
Sbjct: 288 HQQRQEAMLAEAADHSCRVIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGVSDVQAAIDYVNARPHPLALYAFTYDKRLQQQLLHETHSGALVFNATLLHHAVPSLPFGGVGESGMGAYHGRHGFERFSHMRGVFLQPKRNLSHLLYPPYRRWLMKLLGVG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: UPI001F0ED042 (aldehyde dehydrogenase family protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0ED042) HSP 1 Score: 299 bits (766), Expect = 3.050e-98 Identity = 141/164 (85.98%), Postives = 151/164 (92.07%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQRQDA+L EA DHGCRIID G+HAPALIIDPHQ LQVMREEIFGRCLPVIG++DMQ+AIN++NARPHPLALYAFT DK LQQQLL THSGALVFNATLL+HAVPSLPFGG+GESGMGAYHGRHGFERFSHLR VF QSKR SHMLYPPYRRWLMKL+G G
Sbjct: 288 HQQRQDALLQEAHDHGCRIIDHGAHAPALIIDPHQGLQVMREEIFGRCLPVIGVNDMQAAINFVNARPHPLALYAFTLDKGLQQQLLQTTHSGALVFNATLLHHAVPSLPFGGIGESGMGAYHGRHGFERFSHLRSVFYQSKRTPSHMLYPPYRRWLMKLIGLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A651DE65_HALSX (Aldehyde dehydrogenase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DE65_HALSX) HSP 1 Score: 296 bits (759), Expect = 3.480e-97 Identity = 142/164 (86.59%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQR D MLAEA DHGCR+ID G HAPALIIDPHQDLQVMREEIFGRCLPVIG+SDMQ+A+NY+N RPHPLALYAFT DK LQQQLLH T SGALVFNATLL+HAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVF QSKR S MLYPPYRRWLMKL+G G
Sbjct: 288 HQQRLDDMLAEAHDHGCRVIDHGQHAPALIIDPHQDLQVMREEIFGRCLPVIGVSDMQAALNYVNDRPHPLALYAFTSDKTLQQQLLHTTRSGALVFNATLLHHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFYQSKRAPSTMLYPPYRRWLMKLIGLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A2A3XDQ1_9GAMM (Aldehyde dehydrogenase n=3 Tax=Halomonas TaxID=2745 RepID=A0A2A3XDQ1_9GAMM) HSP 1 Score: 294 bits (752), Expect = 3.970e-96 Identity = 138/164 (84.15%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQ R D ML EA DHGCRIID G+HAPALIIDPHQ+LQVMREEIFGRCLP+IG+SDM +A++Y+NARPHPLALYAFT DK LQQQLL THSGALVFNATLL+HAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVF Q+KR SHMLYPPYRRWLMKL+G G
Sbjct: 288 HQDRLDHMLQEARDHGCRIIDHGAHAPALIIDPHQELQVMREEIFGRCLPIIGVSDMAAAVSYVNARPHPLALYAFTHDKGLQQQLLRTTHSGALVFNATLLHHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFYQAKRTPSHMLYPPYRRWLMKLIGLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A653W8N0_9GAMM (Aldehyde dehydrogenase n=23 Tax=Halomonas TaxID=2745 RepID=A0A653W8N0_9GAMM) HSP 1 Score: 293 bits (750), Expect = 7.960e-96 Identity = 141/164 (85.98%), Postives = 147/164 (89.63%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQR DAML EA DHGCR+ID G+HAPALIIDPHQ LQVMREEIFGRCLPVIGISDM +AI Y+NARPHPLALYAFT DK LQQQLL T SGALVFNATLL+HAVPSLPFGGVGESGMGAYHGRHGFERFSHLR VF QSKR SH+LYPPYRRWLMKLLG G
Sbjct: 288 HQQRLDAMLQEAQDHGCRVIDHGTHAPALIIDPHQGLQVMREEIFGRCLPVIGISDMSAAIRYVNARPHPLALYAFTHDKGLQQQLLQTTRSGALVFNATLLHHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRSVFYQSKRTSSHLLYPPYRRWLMKLLGVG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A0D5LZY9_9GAMM (Aldehyde dehydrogenase n=5 Tax=Halomonas TaxID=2745 RepID=A0A0D5LZY9_9GAMM) HSP 1 Score: 286 bits (733), Expect = 2.940e-93 Identity = 137/164 (83.54%), Postives = 145/164 (88.41%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQRQ+AML EA DHGCRIIDQG HAPALIIDPHQ LQVMREE F RCLPVIG+SD+ +AIN +NARPHPLALYAFT DK LQQQLL T SGALVFN TLL+HAVPSLPFGGVGESGMGAYHGRHGFERFSHLR +F Q KR LSHMLYPPYRRWLMKL+G G
Sbjct: 288 HQQRQEAMLQEAHDHGCRIIDQGPHAPALIIDPHQGLQVMREETFNRCLPVIGVSDISAAINVVNARPHPLALYAFTHDKGLQQQLLETTLSGALVFNTTLLHHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRSIFYQPKRTLSHMLYPPYRRWLMKLIGLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A511UQA8_9GAMM (Aldehyde dehydrogenase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UQA8_9GAMM) HSP 1 Score: 283 bits (724), Expect = 6.700e-92 Identity = 135/164 (82.32%), Postives = 146/164 (89.02%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQR +AML EA +HGCRIID G HAPALIIDPHQ LQ+MREEIFGRCLPVIG+SDMQ+AI+Y+NARPHPLALYAFT D LQ QLLH T SGALVFNATLL+HAV SLPFGGVGESGMGAYHGRHGF RFSHLRGVF QSK+ SH+LYPPYRRWL+KLLG G
Sbjct: 288 HQQRIEAMLEEAGNHGCRIIDHGDHAPALIIDPHQGLQIMREEIFGRCLPVIGVSDMQAAISYVNARPHPLALYAFTRDNALQHQLLHTTRSGALVFNATLLHHAVHSLPFGGVGESGMGAYHGRHGFTRFSHLRGVFYQSKQATSHILYPPYRRWLIKLLGLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: H0J4D2_9GAMM (Aldehyde dehydrogenase n=1 Tax=Halomonas sp. GFAJ-1 TaxID=1118153 RepID=H0J4D2_9GAMM) HSP 1 Score: 259 bits (662), Expect = 1.480e-82 Identity = 125/164 (76.22%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQQR D +L EA DHGCRIID G HAP LIIDP DL VMREEIFGRCLPVIG+ ++ AI Y+NARPHPLALYAFT DK LQ L THSGALVFN TLL+HAVPSLPFGGVGESGMG+YHGRHGFERFSHLRG+F QSKR S ++ PPYRRWLMKLL G
Sbjct: 288 HQQRLDNLLEEARDHGCRIIDAGPHAPVLIIDPTHDLAVMREEIFGRCLPVIGVKNIDDAIAYVNARPHPLALYAFTDDKALQLTLRQHTHSGALVFNETLLHHAVPSLPFGGVGESGMGSYHGRHGFERFSHLRGIFYQSKRPSSRLIRPPYRRWLMKLLRLG 451
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A510J3L2_9GAMM (Aldedh domain-containing protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A510J3L2_9GAMM) HSP 1 Score: 244 bits (624), Expect = 1.280e-80 Identity = 117/162 (72.22%), Postives = 132/162 (81.48%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLG 486
HQ R +L EA DHGCR+IDQG+H+PAL+IDPHQ L +M+EEIFGR LP+I + M AI +INARPHPL LYAFT +K LQ+ L H T SGALVFN TLL+HAV SLPFGGVGESGMGAYHGRHGFERFSHLRGVF QS+R S L PPYRRWL+KLLG
Sbjct: 5 HQARIKQLLDEARDHGCRVIDQGTHSPALVIDPHQGLALMQEEIFGRILPLISVKQMDDAIRFINARPHPLVLYAFTRNKALQESLRHTTRSGALVFNETLLHHAVSSLPFGGVGESGMGAYHGRHGFERFSHLRGVFYQSQRPTSRWLSPPYRRWLLKLLG 166
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Match: A0A1U9RBF5_9GAMM (Aldehyde dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9RBF5_9GAMM) HSP 1 Score: 253 bits (645), Expect = 5.350e-80 Identity = 120/164 (73.17%), Postives = 133/164 (81.10%), Query Frame = 1
Query: 1 HQQRQDAMLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMQSAINYINARPHPLALYAFTFDKQLQQQLLHETHSGALVFNATLLYHAVPSLPFGGVGESGMGAYHGRHGFERFSHLRGVFIQSKRNLSHMLYPPYRRWLMKLLGFG 492
HQ+R D++L EA DHGCRIID G+HAP LIIDP QDL VMREEIFGRCLPVIG+ AI Y+NAR HPLALYAFT DK LQ L T SGALVFN TLL+H+VPSLPFGGVGESGMG YHGRHGFERFSHLRG+F Q+K+ S +L PPY RWL+KLLG G
Sbjct: 288 HQRRIDSLLNEARDHGCRIIDSGAHAPVLIIDPTQDLAVMREEIFGRCLPVIGVKGFDDAIGYVNARAHPLALYAFTNDKTLQSTLRQRTRSGALVFNETLLHHSVPSLPFGGVGESGMGTYHGRHGFERFSHLRGIFYQAKKPTSRLLRPPYHRWLLKLLGLG 451 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12342.1466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12342.1466.1 >prot_E-siliculosus-1a_F_contig12342.1466.1 ID=prot_E-siliculosus-1a_F_contig12342.1466.1|Name=mRNA_E-siliculosus-1a_F_contig12342.1466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=158bp MLAEAADHGCRIIDQGSHAPALIIDPHQDLQVMREEIFGRCLPVIGISDMback to top mRNA from alignment at E-siliculosus-1a_F_contig12342:1..495+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12342.1466.1 ID=mRNA_E-siliculosus-1a_F_contig12342.1466.1|Name=mRNA_E-siliculosus-1a_F_contig12342.1466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=495bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12342:1..495+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12342:1..495+ >mRNA_E-siliculosus-1a_F_contig12342.1466.1 ID=mRNA_E-siliculosus-1a_F_contig12342.1466.1|Name=mRNA_E-siliculosus-1a_F_contig12342.1466.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=948bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12342:1..495+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |