mRNA_E-siliculosus-1a_F_contig1231.1452.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1231.1452.1
Unique NamemRNA_E-siliculosus-1a_F_contig1231.1452.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: D8LCU1_ECTSI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU1_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.550e-82
Identity = 285/335 (85.07%), Postives = 288/335 (85.97%), Query Frame = 3 
Query:  624 VQGGYQPPPPVPSASSSYQYQPPAPAAP----------TXXXXXXXXXXXXXXXXXXXXXXXXATSPPSSXXXXXXXXXXXXXXXXXXXXAAPTVALRKVTPAAQPXXXXSSQPAAEPYTGLRSTFSSSPPAPAPAPYSPPVPAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAK 1598
            +QGGYQPPPPVPSASSSYQYQPPA              T      XXXXX XXX XXXXXXXXATSPP  XXXXXXXXXXXXXXXXXXXX                XXXX    AAEPYTGLRSTFSSSPPAPAPAPYSPPVPAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPP+FCKDEAVKAKS ECVLMVLTGVREDQIENCLAGLSLDE+DVLVKYVYKGLGMPRNNGPLFKWHAK
Sbjct:   22 IQGGYQPPPPVPSASSSYQYQPPAXXXXXXXXXXXXXXTPAAASSXXXXXAXXXYXXXXXXXXATSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEPYTGLRSTFSSSPPAPAPAPYSPPVPAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XAGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPIFCKDEAVKAKSTECVLMVLTGVREDQIENCLAGLSLDEIDVLVKYVYKGLGMPRNNGPLFKWHAK 355
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BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A6H5JER8_9PHAE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER8_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.680e-72
Identity = 242/273 (88.64%), Postives = 243/273 (89.01%), Query Frame = 3 
Query:  783 ATSPPSSXXXXXXXXXXXXXXXXXXXXAAPTVALRKVTPAAQPXXXXSSQPAAEPYTGLRSTFSSSPPAPAPAPYSPPVPAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKV 1601
            ATSPPSSXXXXXXXXXXXXXXXXXXXXAAPTVALRKVTP AQPXXXX  QPAAEPYTGLRSTFSS                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XX      AGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALR+SLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKV
Sbjct:  327 ATSPPSSXXXXXXXXXXXXXXXXXXXXAAPTVALRKVTPVAQPXXXXXXQPAAEPYTGLRSTFSS----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQXXAVGGAGAGAPSKVPGAVSDPAAMGEVQQRETAVRGMLHRDPGGALRRSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKV 583
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A7S0JJE6_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJE6_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 7.550e-18
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 3 
Query: 1290 VSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNN---GPLFKWHAKV 1601
            V D   +  ++ RE+++  +L  DP  AL  SL DPP   K +AVK  S + V+  L G++E  IE  +A LSLD+ DVL+KY+Y GLG P+ +    PL KWH+ V
Sbjct:   17 VDDGVLLASIKTRESSINPLLRTDPVKALHISLTDPPYQTKTQAVKDASCDVVVKALLGIKEADIEGVVASLSLDQCDVLMKYLYCGLGQPKRDKQYAPLLKWHSFV 123
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A7S0Q3G7_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q3G7_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 7.290e-15
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 
Query: 1296 DPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNG---PLFKWHAKV 1601
            D A +  ++ R++++  +L  DP  AL  SL DPP   K +AVK  S + V   L  +++  +E  +A LSLD+ DVL+KY+Y GLG  + +    PL KWH  V
Sbjct:   20 DNAMLAAIKARDSSIAPLLRTDPVRALHLSLADPPYQTKTQAVKDASCDVVCKALLAIKDADVEPAVAALSLDQCDVLMKYIYSGLGQTKKDKQYQPLLKWHGLV 124
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A7RWB9_NEMVE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RWB9_NEMVE)

HSP 1 Score: 81.3 bits (199), Expect = 1.580e-14
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 3 
Query: 1347 MLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNN--GPLFKWHAKV 1601
            ++ +  G AL+  L +PPV  K++AVK K+ + VL VLT  R ++I+N L GL+  E+D+L+KY+Y+G   P  N  G L  WH KV
Sbjct:   45 LMSKKNGEALKAVLANPPVLSKNQAVKDKAFQLVLKVLTTTRSNEIDNALKGLTKSEVDILMKYIYRGFAQPNENSCGILLNWHEKV 131
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A7S3SSM4_9SPIT (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SSM4_9SPIT)

HSP 1 Score: 77.0 bits (188), Expect = 4.420e-13
Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 3 
Query: 1296 DPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGP---LFKWHAKV 1601
            D   M  V+ R+ +V  +L  DP  ALR SL DPP   K  +VK  + E V   LT +++ +IE  +  L+LDE D+L+KY+Y+GLG+         L KWH  V
Sbjct:   23 DGELMAAVRSRDASVTPLLRSDPVSALRLSLTDPPYATKTTSVKVAAFEVVAKALTIIQDTEIEAAVRTLTLDECDILMKYLYRGLGLEGREKLYPILLKWHPIV 127
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BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: UPI000644EC78 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EC78)

HSP 1 Score: 76.6 bits (187), Expect = 5.190e-13
Identity = 36/108 (33.33%), Postives = 66/108 (61.11%), Query Frame = 3 
Query: 1275 KVPGAVSDPAAMGEVQQRETAVRGMLHRD-PGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLF-KWH 1592
            K  G  SD     ++Q R+T +  ++++  P  AL  +L+DPP+  K +A+K ++   V+ VL+ ++E  ++ C+  L  D++D+L+KY+Y+GL    NN  +F KW+
Sbjct:   12 KTTGGKSDAEYKADIQARQTEISKLMNQGKPTDALPIALQDPPIHTKTQAIKDQNATAVIGVLSAIKEKDVDGCVNQLDDDQLDILMKYIYRGLATGDNNSAIFFKWY 119
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A7S4I0T3_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I0T3_9EUKA)

HSP 1 Score: 75.9 bits (185), Expect = 1.760e-12
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 3 
Query: 1290 VSDPAAMGEVQQRETAVRGMLHR---DPGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLF----KWHAKV 1601
            V D   M  ++ RE+A   +L     DP  AL  SL+DPP   K E+VK  S E V  VL  ++E  ++N LA LSL++ DVL+KYVY+ +G+       +    KWH  V
Sbjct:   36 VDDATLMAAIKARESACAPLLKPMGGDPLKALALSLQDPPYATKSESVKVASCELVCRVLALIKEADMDNALASLSLEDCDVLMKYVYRAVGIAGKEQTFYTAMLKWHPAV 146
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: A0A8J4UWY0_9MYCE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UWY0_9MYCE)

HSP 1 Score: 74.3 bits (181), Expect = 3.010e-12
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 3 
Query: 1278 VPGAVSDPAAMGEVQQRETAVRGMLHRD-PGGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKV 1601
            + G  SD     ++  RE      L+   P  AL  +L DPP++ K +A+K ++   VL +L G +E  IE  + GL+ D++DVL+KY+Y+GL    N+    KWH  V
Sbjct:   10 IAGGKSDAEYKSDIANRERECTKALNMGKPQDALPIALADPPIYTKTQAIKDQNATVVLSLLGGFKEKDIEASVNGLNDDQLDVLMKYIYRGLAAGENSAVFLKWHEVV 118
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Match: D2VCL2_NAEGR (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VCL2_NAEGR)

HSP 1 Score: 73.2 bits (178), Expect = 4.820e-12
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query: 1365 GGALRKSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNG-PLFKWHAKV 1601
            G AL+KSLE+PP+  K++  K KS + V  VL   +E  I   +  L  DE+D+L+KY+Y+ L    N+  PLFKWH KV
Sbjct:   21 GDALKKSLENPPLAAKNKETKKKSADVVAKVLVNTKEADIPKIVDSLDADELDILMKYIYRCLETGDNDSKPLFKWHEKV 100
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1231.1452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCU1_ECTSI1.550e-8285.07Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A6H5JER8_9PHAE4.680e-7288.64Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0JJE6_9EUKA7.550e-1842.99Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0Q3G7_9EUKA7.290e-1539.05Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A7RWB9_NEMVE1.580e-1443.68Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S3SSM4_9SPIT4.420e-1340.00Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
UPI000644EC785.190e-1333.33hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S4I0T3_9EUKA1.760e-1239.64Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A8J4UWY0_9MYCE3.010e-1235.78Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
D2VCL2_NAEGR4.820e-1245.00Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1231contigE-siliculosus-1a_F_contig1231:31501..35380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1200
Model size1601
Exons6
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1231.1452.1prot_E-siliculosus-1a_F_contig1231.1452.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1231 32385..33897 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927749.7983668-UTR-E-siliculosus-1a_F_contig1231:31500..315471622927749.7983668-UTR-E-siliculosus-1a_F_contig1231:31500..31547Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 31501..31547 +
1696318665.815532-UTR-E-siliculosus-1a_F_contig1231:31500..315471696318665.815532-UTR-E-siliculosus-1a_F_contig1231:31500..31547Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 31501..31547 +
1622927749.810315-UTR-E-siliculosus-1a_F_contig1231:32334..323841622927749.810315-UTR-E-siliculosus-1a_F_contig1231:32334..32384Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 32335..32384 +
1696318665.8241148-UTR-E-siliculosus-1a_F_contig1231:32334..323841696318665.8241148-UTR-E-siliculosus-1a_F_contig1231:32334..32384Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 32335..32384 +
1622927749.8590753-UTR-E-siliculosus-1a_F_contig1231:33897..339311622927749.8590753-UTR-E-siliculosus-1a_F_contig1231:33897..33931Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 33898..33931 +
1696318665.870809-UTR-E-siliculosus-1a_F_contig1231:33897..339311696318665.870809-UTR-E-siliculosus-1a_F_contig1231:33897..33931Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 33898..33931 +
1622927749.868331-UTR-E-siliculosus-1a_F_contig1231:34153..342491622927749.868331-UTR-E-siliculosus-1a_F_contig1231:34153..34249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 34154..34249 +
1696318665.8805542-UTR-E-siliculosus-1a_F_contig1231:34153..342491696318665.8805542-UTR-E-siliculosus-1a_F_contig1231:34153..34249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 34154..34249 +
1622927749.8781283-UTR-E-siliculosus-1a_F_contig1231:35206..353801622927749.8781283-UTR-E-siliculosus-1a_F_contig1231:35206..35380Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 35207..35380 +
1696318665.8894792-UTR-E-siliculosus-1a_F_contig1231:35206..353801696318665.8894792-UTR-E-siliculosus-1a_F_contig1231:35206..35380Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1231 35207..35380 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927749.8219466-CDS-E-siliculosus-1a_F_contig1231:32384..328501622927749.8219466-CDS-E-siliculosus-1a_F_contig1231:32384..32850Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 32385..32850 +
1696318665.8348157-CDS-E-siliculosus-1a_F_contig1231:32384..328501696318665.8348157-CDS-E-siliculosus-1a_F_contig1231:32384..32850Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 32385..32850 +
1622927749.8361876-CDS-E-siliculosus-1a_F_contig1231:32886..329481622927749.8361876-CDS-E-siliculosus-1a_F_contig1231:32886..32948Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 32887..32948 +
1696318665.8474717-CDS-E-siliculosus-1a_F_contig1231:32886..329481696318665.8474717-CDS-E-siliculosus-1a_F_contig1231:32886..32948Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 32887..32948 +
1622927749.848803-CDS-E-siliculosus-1a_F_contig1231:33225..338971622927749.848803-CDS-E-siliculosus-1a_F_contig1231:33225..33897Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 33226..33897 +
1696318665.8602934-CDS-E-siliculosus-1a_F_contig1231:33225..338971696318665.8602934-CDS-E-siliculosus-1a_F_contig1231:33225..33897Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1231 33226..33897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1231.1452.1

>prot_E-siliculosus-1a_F_contig1231.1452.1 ID=prot_E-siliculosus-1a_F_contig1231.1452.1|Name=mRNA_E-siliculosus-1a_F_contig1231.1452.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=400bp
MSAPPPPPPPRRGPPPLPGSAPPPLPGSAPPPPPVPSAGPPPIPSSAPPS
IPASAPPPVPSYGPPRTGVSPPPPPVPSRGPPAVPGSSPPPVPMSSPPPV
PGGARPMLAHSAPAARGPSLIPSSSPPPPRCRLPTSPPPRRRCQATSHRP
PRRSRATSPLPRRLCRDPSRHRRRYGPGRVPAAAPGPLRLLELPVPTPSP
CSAHGRLPAPASAAPVLIIVRVSTPCTGGDVSPIVGIPAPRPGDPVLHTG
RAHPAGGANGGAPESNSRGPAPAPAVVTACRGALHGAAVYLQLVAAGAGA
GPLLTPGTGCRAPAAGRDVPASRRGGAVRRGRGRVQPSRGSTGTGCVGAC
AAVQERFTAVLAAGVRAAPACCRLGGGLPAPRGRRRGRGSTEQGAGRGV*
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mRNA from alignment at E-siliculosus-1a_F_contig1231:31501..35380+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1231.1452.1 ID=mRNA_E-siliculosus-1a_F_contig1231.1452.1|Name=mRNA_E-siliculosus-1a_F_contig1231.1452.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3880bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1231:31501..35380+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACGTGCGTGCTGTGAGAGGCGCCAACAAGAGAGGAAGACAGAAGTGGTG
AGAGAGAGAGAGACATTGCATAATTGGTCCGCTTTCCTTGTTGTTGTTCT
CTCCAAAATGAAAAATTGGTTGATGCTGCGCGTCGATCATGGCGCAACAT
CCTTTCTCCCGAACAAAATGGGTGTAGAAGAGAGAGGGGTTCGCACACCG
GCAGGAGGGACAGCAGGCAGATATGTACGGATGGTGTCAGCTACGCGACT
CTGCTGTGGCGTCGCGTCTTGGAGCGAGGAACTCTTTCTGGTCGGCAAGA
CCAAAGCAGTAGCCGCAATAGTGTCCCCGCGATGTCCCTGAGTGTTTTTT
TTTTTTGCAGCGGCTCCCAGATGTATTCCGCACAGCGATACAAAGCTTAC
GGAGAGGACATGGCTGTTTTTTGCTCGGGGAATCGTAAACACACAGGTAG
CTTCCGCTGACGCCATGAATTCATTGCTGATCTATCCCAGACTCTTATCT
GTGGAGATGAATTGGTTGTGCCATACGTAAAGAACGAAAAGAGCCCAGCC
CTCACCGGGCACGGGACGCCGGGCACCCCCAGCAGGCAAAGAGAAGCTGT
ATGCAGTAAAGATGCGTTGTTCATCTGAGATGGCATCACAGACACCAGCT
TGTGTCTGCCCCCGTGTTTCTTCATGTTTTGTTTTTTTGCAGGCCTCAAC
TCCTTCCACAAATGTACCGTAGTAGGAAGCACACAGCTTCTTCGTGGAAC
CCTTTCCGATGCTCCTCCTTCCAAGCCGGTTTACCCCCTTACCCTTTTGC
CGTCTCTTTCCCGTTTTTATCCGGCATCCCATAGGTCGCAGCAGCCGCAG
CCCGCCGAGAGACCGAACGCGAGGCAACAACATCATGTCGGCGCCGCCGC
CGCCACCGCCTCCCCGGCGTGGGCCACCGCCGCTCCCCGGGTCAGCACCC
CCGCCACTCCCAGGTTCAGCACCACCGCCGCCACCCGTCCCGTCTGCCGG
CCCCCCGCCCATCCCCAGCTCCGCTCCTCCGTCCATCCCCGCCTCGGCGC
CGCCGCCGGTGCCGTCTTACGGCCCCCCGCGGACGGGGGTGTCCCCCCCG
CCGCCGCCCGTTCCAAGCCGGGGGCCCCCTGCCGTGCCGGGATCCTCGCC
GCCGCCCGTGCCGATGAGCTCGCCCCCGCCGGTCCCCGGCGGCGCCCGGC
CGATGCTGGCGCACTCGGCGCCGGCGGCGCGGGGGCCGTCGCTGATACCG
AGCTCCTCGCCGCCCCCCCCCCGGTGCCGTCTGCCTACCAGCCCCCCGCC
CCGCCGGCGGTGCCAAGCTACCAGCCACCGGCCCCCCCGGCGGTCCCGAG
GTCCCAGCCGCCGGCCCCGCCCCCGGCGGTGCCGAGCTACCAGCCCCCTG
CCCCGCCGGCTGTGCCGAGATCCCAGCCGCCACCGCCGCCGGTACGGTGT
ACAGATGAAGGCGTCGTGGTATGTAGCGGTTAGCACTTTGGGAGACGAAA
TTGGAGACCATTTCTTTGTGAGCATGTTGTCACCATCTACAGTTGTGTGG
TGTAAGCATGGATGTACTTTATAGCTGTAGGTTGAGTCACGCAAAACGCA
TGCCCCAACTGCTGTGTACATGAATGGTGGGCAACGCTGCTGTCACCATG
GCCGTAACTTATAATTTGCGGTTTTCTCTCCCTTCGCCCGCCTTGTCGCC
CGCTCCCACAGCAGCCCGCCGCAAGCCAGGGAGGGTACCAGCCGCCGCCC
CCGGTCCCCTCCGCCTCCTCGAGCTACCAGTACCAACCCCCAGCCCCTGC
AGCGCCCACGGGAGGTTACCAGCCCCCGCCTCCGCCGCCCCCGTCCTCAT
CATCGTACGGGTATCAACCCCCTGCACCGGCGGCGACGTCTCCCCCATCG
TCGGGATACCAGCCCCCCGCCCCGGCGATCCCGTCCTACACACCGGCCGC
GCACACCCCGCCGGCGGCGCCAACGGTGGCGCTCCGGAAAGTAACTCCCG
CGGCCCAGCCCCCGCCCCCGCCGTCGTCACAGCCTGCCGCGGAGCCCTAC
ACGGGGCTGCGGTCTACCTTCAGCTCGTCGCCGCCGGCGCCGGCGCCGGC
CCCTTACTCACCCCCGGTACCGGCTGCCGTGCCCCCGCCGCCGGCCGCGA
CGTACCAGCCTCCCGCCGCGGCGGCGCAGTACGGCGGGGGAGGGGGAGGG
TACAACCCTCCCGTGGCAGCACCGGCACCGGCTGCGTTGGCGCCTGTGCA
GCAGTACAGGAGCGCTTCACCGCCGTCCTCGCAGCAGGGGTACGCGCCGC
CCCCGCCTGCTGCCGCCTCGGGGGGGGGTTACCAGCCCCCCGCGGTCGGA
GGAGGGGACGCGGGAGCACCGAGCAAGGTGCCGGGCGCGGTGTCTGACCC
TGCGGCTATGGGCGAGGTGCAGCAACGAGAGGTGAGAGCAGGTGCTTGTT
TTTTCAAGAACGTTGTTGTTGTGTGTCACGAGAAGCTCAGTTCAGAAGGC
GAGCGTTGTTTGTTTTGGGAACGGACGAAGGAACATCTCGAATGTATTGT
AGAAGACGGACCAGATGCTCAAAAGTCCACGTGCTATGTATGTAGCACCG
CCTCCTGTTTTGCCGTGACTTTAACCCAGCTCTCTTGTCGGTTCGAATGA
CAGACGGCTGTGCGGGGGATGCTGCACAGAGACCCCGGCGGGGCGCTCCG
GAAATCGCTCGAGGACCCGCCTGTCTTCTGCAAGGACGAAGCCGTCAAGG
TTCGCGCGCGTGGACGAGTTGTCCTGATTGATTTCGCTCGTCTTGTGGTA
TTGGTTACAGCGACGTGGGGGAGTTTTTGGTTGGTGCTTATCTTGCAAAC
GCGTAACCGGTGCGTTCTTGCCTCCCCCCTGCAGGCATTTGATATGGAAG
GAAATTCAAACTTACTTACCCTAGACGTGCATCGTGATGGACCGCATCAT
GTCTCCCTTTGGCGGTGCATGCGTGAGACACCCCCCTTGCTTCACTCGAT
TTACGTGTCAAAAGGTCATGTCCTTCATTTTCTCGGGATTTGGGTCGAGC
ATTCGTGGGTTCAATCGTCTCGGAGCCAGCACCGACGGATCCGCAGCGGG
TTATAAGACCAGTGACCCAACTTCCCATCCCATAACCTCCCCGTATTGGT
ATAGAAGTAGATCAGTAGCCAACTCCCCAACTCGGTTGCTCAAACCCTCC
CCGTATCTGGGATGATCATGAACCCAACTACCCATCCCGGTTGCGAGTAA
GACCCGTGACCCAACTTCTCATCAAGGTTGTCGATATTGCTGCTTGTTGT
AAGGCCGTATACACTTTATTTATTGTTTTTGGTTTGGGGTACGTTTTTGG
TTTTGGGGAGTACAGATCCTCCCCGTACCTGGGTGTTGATCAGTAGCCAA
CTCCCCGTCCCGGTTGGTTGCTCGTGACATCCTCGTACATCCCGGGTATA
ACCAGTGAACCAACTCCACCGCGGTTGCCCGTACCCTCCCCGTATCCGAG
TGTAGACCATTGACCCAACTTCCCATCCCGGTTGTGCATAACATCTCCGC
ATCCATGTGTAGACCAGAGACCCAACCTCCCATCCCGGTTGTTCATGCCC
TCCCCGTATCCGAGTGTAGACCTGTGACCCAACTTCCTATCCCACACATA
CCCGCGGGTAAAGACCAGTGACCCAACTCCCCATCTCATGTCCTCCCCGC
GAACAGGCTAAGAGCATGGAGTGCGTATTGATGGTGCTCACGGGGGTCCG
CGAGGACCAGATCGAGAATTGCCTGGCCGGTCTCTCCTTGGACGAGATGG
ACGTCCTCGTCAAGTACGTCTACAAGGGCCTGGGGATGCCTCGCAACAAC
GGCCCGCTGTTCAAGTGGCACGCGAAGGTG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1231:31501..35380+

>mRNA_E-siliculosus-1a_F_contig1231.1452.1 ID=mRNA_E-siliculosus-1a_F_contig1231.1452.1|Name=mRNA_E-siliculosus-1a_F_contig1231.1452.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2400bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1231:31501..35380+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGGCGCCGCCGCCGCCACCGCCTCCCCGGCGTGGGCCACCGCCGCT
CCCCGGGTCAGCACCCCCGCCACTCCCAGGTTCAGCACCACCGCCGCCAC
CCGTCCCGTCTGCCGGCCCCCCGCCCATCCCCAGCTCCGCTCCTCCGTCC
ATCCCCGCCTCGGCGCCGCCGCCGGTGCCGTCTTACGGCCCCCCGCGGAC
GGGGGTGTCCCCCCCGCCGCCGCCCGTTCCAAGCCGGGGGCCCCCTGCCG
TGCCGGGATCCTCGCCGCCGCCCGTGCCGATGAGCTCGCCCCCGCCGGTC
CCCGGCGGCGCCCGGCCGATGCTGGCGCACTCGGCGCCGGCGGCGCGGGG
GCCGTCGCTGATACCGAGCTCCTCGCCGCCCCCCCCCCGGTGCCGTCTGC
CTACCAGCCCCCCGCCCCGCCGGCGGTGCCAAGCTACCAGCCACCGGCCC
CCCCGGCGGTCCCGAGATGTCGGCGCCGCCGCCGCCACCGCCTCCCCGGC
GTGGGCCACCGCCGCTCCCCGGGTCAGCACCCCCGCCACTCCCAGGTTCA
GCACCACCGCCGCCACCCGTCCCGTCTGCCGGCCCCCCGCCCATCCCCAG
CTCCGCTCCTCCGTCCATCCCCGCCTCGGCGCCGCCGCCGGTGCCGTCTT
ACGGCCCCCCGCGGACGGGGGTGTCCCCCCCGCCGCCGCCCGTTCCAAGC
CGGGGGCCCCCTGCCGTGCCGGGATCCTCGCCGCCGCCCGTGCCGATGAG
CTCGCCCCCGCCGGTCCCCGGCGGCGCCCGGCCGATGCTGGCGCACTCGG
CGCCGGCGGCGCGGGGGCCGTCGCTGATACCGAGCTCCTCGCCGCCCCCC
CCCCGGTGCCGTCTGCCTACCAGCCCCCCGCCCCGCCGGCGGTGCCAAGC
TACCAGCCACCGGCCCCCCCGGCGGTCCCGAGCTACCAGCCCCCTGCCCC
GCCGGCTGTGCCGAGATCCCAGCCGCCACCGCCGCCGGTACGGTCTACCA
GCCCCCTGCCCCGCCGGCTGTGCCGAGATCCCAGCCGCCACCGCCGCCGG
TACGGTCCAGGGAGGGTACCAGCCGCCGCCCCCGGTCCCCTCCGCCTCCT
CGAGCTACCAGTACCAACCCCCAGCCCCTGCAGCGCCCACGGGAGGTTAC
CAGCCCCCGCCTCCGCCGCCCCCGTCCTCATCATCGTACGGGTATCAACC
CCCTGCACCGGCGGCGACGTCTCCCCCATCGTCGGGATACCAGCCCCCCG
CCCCGGCGATCCCGTCCTACACACCGGCCGCGCACACCCCGCCGGCGGCG
CCAACGGTGGCGCTCCGGAAAGTAACTCCCGCGGCCCAGCCCCCGCCCCC
GCCGTCGTCACAGCCTGCCGCGGAGCCCTACACGGGGCTGCGGTCTACCT
TCAGCTCGTCGCCGCCGGCGCCGGCGCCGGCCCCTTACTCACCCCCGGTA
CCGGCTGCCGTGCCCCCGCCGCCGGCCGCGACGTACCAGCCTCCCGCCGC
GGCGGCGCAGTACGGCGGGGGAGGGGGAGGGTACAACCCTCCCGTGGCAG
CACCGGCACCGGCTGCGTTGGCGCCTGTGCAGCAGTACAGGAGCGCTTCA
CCGCCGTCCTCGCAGCAGGGGTACGCGCCGCCCCCGCCTGCTGCCGCCTC
GGGGGGGGGTTACCAGCCCCCCGCGGTCGGAGGAGGGGACGCGGGAGCAC
CGAGCAAGGTGCCGGGCGCGGTGTCTGACCAGGGAGGGTACCAGCCGCCG
CCCCCGGTCCCCTCCGCCTCCTCGAGCTACCAGTACCAACCCCCAGCCCC
TGCAGCGCCCACGGGAGGTTACCAGCCCCCGCCTCCGCCGCCCCCGTCCT
CATCATCGTACGGGTATCAACCCCCTGCACCGGCGGCGACGTCTCCCCCA
TCGTCGGGATACCAGCCCCCCGCCCCGGCGATCCCGTCCTACACACCGGC
CGCGCACACCCCGCCGGCGGCGCCAACGGTGGCGCTCCGGAAAGTAACTC
CCGCGGCCCAGCCCCCGCCCCCGCCGTCGTCACAGCCTGCCGCGGAGCCC
TACACGGGGCTGCGGTCTACCTTCAGCTCGTCGCCGCCGGCGCCGGCGCC
GGCCCCTTACTCACCCCCGGTACCGGCTGCCGTGCCCCCGCCGCCGGCCG
CGACGTACCAGCCTCCCGCCGCGGCGGCGCAGTACGGCGGGGGAGGGGGA
GGGTACAACCCTCCCGTGGCAGCACCGGCACCGGCTGCGTTGGCGCCTGT
GCAGCAGTACAGGAGCGCTTCACCGCCGTCCTCGCAGCAGGGGTACGCGC
CGCCCCCGCCTGCTGCCGCCTCGGGGGGGGGTTACCAGCCCCCCGCGGTC
GGAGGAGGGGACGCGGGAGCACCGAGCAAGGTGCCGGGCGCGGTGTCTGA
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